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DNA capture by a CRISPR-Cas9–guided adenine base editor 期刊论文
Science, 2020
作者:  Audrone Lapinaite;  Gavin J. Knott;  Cody M. Palumbo;  Enrique Lin-Shiao;  Michelle F. Richter;  Kevin T. Zhao;  Peter A. Beal;  David R. Liu;  Jennifer A. Doudna
收藏  |  浏览/下载:6/0  |  提交时间:2020/08/09
CRISPR-CasΦ from huge phages is a hypercompact genome editor 期刊论文
Science, 2020
作者:  Patrick Pausch;  Basem Al-Shayeb;  Ezra Bisom-Rapp;  Connor A. Tsuchida;  Zheng Li;  Brady F. Cress;  Gavin J. Knott;  Steven E. Jacobsen;  Jillian F. Banfield;  Jennifer A. Doudna
收藏  |  浏览/下载:16/0  |  提交时间:2020/07/21
A mycobacterial ABC transporter mediates the uptake of hydrophilic compounds 期刊论文
NATURE, 2020, 580 (7803) : 409-+
作者:  Al-Shayeb, Basem;  Sachdeva, Rohan;  Chen, Lin-Xing;  Ward, Fred;  Munk, Patrick;  Devoto, Audra;  Castelle, Cindy J.;  Olm, Matthew R.;  Bouma-Gregson, Keith;  Amano, Yuki;  He, Christine;  Meheust, Raphael;  Brooks, Brandon;  Thomas, Alex;  Levy, Adi;  Matheus-Carnevali, Paula;  Sun, Christine;  Goltsman, Daniela S. A.;  Borton, Mikayla A.;  Sharrar, Allison;  Jaffe, Alexander L.;  Nelson, Tara C.;  Kantor, Rose;  Keren, Ray;  Lane, Katherine R.;  Farag, Ibrahim F.;  Lei, Shufei;  Finstad, Kari;  Amundson, Ronald;  Anantharaman, Karthik;  Zhou, Jinglie;  Probst, Alexander J.;  Power, Mary E.;  Tringe, Susannah G.;  Li, Wen-Jun;  Wrighton, Kelly;  Harrison, Sue;  Morowitz, Michael;  Relman, David A.;  Doudna, Jennifer A.;  Lehours, Anne-Catherine;  Warren, Lesley;  Cate, Jamie H. D.;  Santini, Joanne M.;  Banfield, Jillian F.
收藏  |  浏览/下载:40/0  |  提交时间:2020/07/03

Mycobacterium tuberculosis (Mtb) is an obligate human pathogen and the causative agent of tuberculosis(1-3). Although Mtb can synthesize vitamin B-12 (cobalamin) de novo, uptake of cobalamin has been linked to pathogenesis of tuberculosis2. Mtb does not encode any characterized cobalamin transporter(4-6)  however, the gene rv1819c was found to be essential for uptake of cobalamin(1). This result is difficult to reconcile with the original annotation of Rv1819c as a protein implicated in the transport of antimicrobial peptides such as bleomycin(7). In addition, uptake of cobalamin seems inconsistent with the amino acid sequence, which suggests that Rv1819c has a bacterial ATP-binding cassette (ABC)-exporter fold1. Here, we present structures of Rv1819c, which reveal that the protein indeed contains the ABC-exporter fold, as well as a large water-filled cavity of about 7,700 angstrom(3), which enables the protein to transport the unrelated hydrophilic compounds bleomycin and cobalamin. On the basis of these structures, we propose that Rv1819c is a multi-solute transporter for hydrophilic molecules, analogous to the multidrug exporters of the ABC transporter family, which pump out structurally diverse hydrophobic compounds from cells(8-11).


  
Controlling CRISPR-Cas9 with ligand-activated and ligand-deactivated sgRNAs 期刊论文
NATURE COMMUNICATIONS, 2019, 10
作者:  Kundert, Kale;  Lucas, James E.;  Watters, Kyle E.;  Fellmann, Christof;  Ng, Andrew H.;  Heineike, Benjamin M.;  Fitzsimmons, Christina M.;  Oakes, Benjamin L.;  Qu, Jiuxin;  Prasad, Neha;  Rosenberg, Oren S.;  Savage, David F.;  El-Samad, Hana;  Doudna, Jennifer A.;  Kortemme, Tanja
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
CasX enzymes comprise a distinct family of RNA-guided genome editors 期刊论文
NATURE, 2019, 566 (7743) : 218-+
作者:  Liu, Jun-Jie;  Orlova, Natalia;  Oakes, Benjamin L.;  Ma, Enbo;  Spinner, Hannah B.;  Baney, Katherine L. M.;  Chuck, Jonathan;  Tan, Dan;  Knott, Gavin J.;  Harrington, Lucas B.;  Al-Shayeb, Basem;  Wagner, Alexander;  Broetzmann, Julian;  Staahl, Brett T.;  Taylor, Kian L.;  Desmarais, John;  Nogales, Eva;  Doudna, Jennifer A.
收藏  |  浏览/下载:16/0  |  提交时间:2019/11/27
Programmed DNA destruction by miniature CRISPR-Cas14 enzymes 期刊论文
SCIENCE, 2018, 362 (6416) : 839-+
作者:  Harrington, Lucas B.;  Burstein, David;  Chen, Janice S.;  Paez-Espino, David;  Ma, Enbo;  Witte, Isaac P.;  Cofsky, Joshua C.;  Kyrpides, Nikos C.;  Banfield, Jillian F.;  Doudna, Jennifer A.
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
Systematic discovery of natural CRISPR-Cas12a inhibitors 期刊论文
SCIENCE, 2018, 362 (6411) : 236-239
作者:  Watters, Kyle E.;  Fellmann, Christof;  Bai, Hua B.;  Ren, Shawn M.;  Doudna, Jennifer A.
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
CRISPR-Cas guides the future of genetic engineering 期刊论文
SCIENCE, 2018, 361 (6405) : 866-869
作者:  Knott, Gavin J.;  Doudna, Jennifer A.
收藏  |  浏览/下载:6/0  |  提交时间:2019/11/27
CRISPR-Cas12a target binding unleashes indiscriminate single-stranded DNase activity 期刊论文
SCIENCE, 2018, 360 (6387) : 436-+
作者:  Chen, Janice S.;  Ma, Enbo;  Harrington, Lucas B.;  Da Costa, Maria;  Tian, Xinran;  Palefsky, Joel M.;  Doudna, Jennifer A.
收藏  |  浏览/下载:6/0  |  提交时间:2019/11/27
Structures of the CRISPR genome integration complex 期刊论文
SCIENCE, 2017, 357 (6356) : 1113-+
作者:  Wright, Addison V.;  Liu, Jun-Jie;  Knott, Gavin J.;  Doxzen, Kevin W.;  Nogales, Eva;  Doudna, Jennifer A.
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27