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DNA-loop extruding condensin complexes can traverse one another 期刊论文
NATURE, 2020
作者:  Li, Xun;  Zhang, Fei;  He, Haiying;  Berry, Joseph J.;  Zhu, Kai;  Xu, Tao
收藏  |  浏览/下载:9/0  |  提交时间:2020/07/03

Condensin, a key component of the structure maintenance of chromosome (SMC) protein complexes, has recently been shown to be a motor that extrudes loops of DNA(1). It remains unclear, however, how condensin complexes work together to collectively package DNA into chromosomes. Here we use time-lapse single-molecule visualization to study mutual interactions between two DNA-loop-extruding yeast condensins. We find that these motor proteins, which, individually, extrude DNA in one direction only are able to dynamically change each other'  s DNA loop sizes, even when far apart. When they are in close proximity, condensin complexes are able to traverse each other and form a loop structure, which we term a Z-loop-three double-stranded DNA helices aligned in parallel with one condensin at each edge. Z-loops can fill gaps left by single loops and can form symmetric dimer motors that pull in DNA from both sides. These findings indicate that condensin may achieve chromosomal compaction using a variety of looping structures.


Single-molecule visualization shows that condensin-a motor protein that extrudes DNA in one direction only-can encounter and pass a second condensin molecule to form a new type of DNA loop that gathers DNA from both sides.


  
"Garnet" Lherzolites in the Purang Ophiolite, Tibet: Evidence for Exhumation of Deep Oceanic Lithospheric Mantle 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2020, 47 (1)
作者:  Gong, Xiao-Han;  Shi, Ren-Deng;  Xu, Ji-Feng;  Huang, Qi-Shuai;  Huang, Xiao-Xiao;  Su, Ben-Xun
收藏  |  浏览/下载:6/0  |  提交时间:2020/07/02
Incoherent strange metal sharply bounded by a critical doping in Bi2212 期刊论文
SCIENCE, 2019, 366 (6469) : 1099-+
作者:  Chen, Su-Di;  Hashimoto, Makoto;  He, Yu;  Song, Dongjoon;  Xu, Ke-Jun;  He, Jun-Feng;  Devereaux, Thomas P.;  Eisaki, Hiroshi;  Lu, Dong-Hui;  Zaanen, Jan;  Shen, Zhi-Xun
收藏  |  浏览/下载:18/0  |  提交时间:2020/02/17
The gut microbiome in atherosclerotic cardiovascular disease 期刊论文
NATURE COMMUNICATIONS, 2017, 8
作者:  Jie, Zhuye;  Xia, Huihua;  Zhong, Shi-Long;  Feng, Qiang;  Li, Shenghui;  Liang, Suisha;  Zhong, Huanzi;  Liu, Zhipeng;  Gao, Yuan;  Zhao, Hui;  Zhang, Dongya;  Su, Zheng;  Fang, Zhiwei;  Lan, Zhou;  Li, Junhua;  Xiao, Liang;  Li, Jun;  Li, Ruijun;  Li, Xiaoping;  Li, Fei;  Ren, Huahui;  Huang, Yan;  Peng, Yangqing;  Li, Guanglei;  Wen, Bo;  Dong, Bo;  Chen, Ji-Yan;  Geng, Qing-Shan;  Zhang, Zhi-Wei;  Yang, Huanming;  Wang, Jian;  Wang, Jun;  Zhang, Xuan;  Madsen, Lise;  Brix, Susanne;  Ning, Guang;  Xu, Xun;  Liu, Xin;  Hou, Yong;  Jia, Huijue;  He, Kunlun;  Kristiansen, Karsten
收藏  |  浏览/下载:14/0  |  提交时间:2019/11/27
Mutations in topoisomerase II beta result in a B cell immunodeficiency 期刊论文
NATURE COMMUNICATIONS, 2019, 10
作者:  Broderick, Lori;  Yost, Shawn;  Li, Dong;  McGeough, Matthew D.;  Booshehri, Laela M.;  Guaderrama, Marisela;  Brydges, Susannah D.;  Kucharova, Karolina;  Patel, Niraj C.;  Harr, Margaret;  Hakonarson, Hakon;  Zackai, Elaine;  Cowell, Ian G.;  Austin, Caroline A.;  Hugle, Boris;  Gebauer, Corinna;  Zhang, Jianguo;  Xu, Xun;  Wang, Jian;  Croker, Ben A.;  Frazer, Kelly A.;  Putnam, Christopher D.;  Hoffman, Hal M.
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27
The structure and function of the global citrus rhizosphere microbiome 期刊论文
NATURE COMMUNICATIONS, 2018, 9
作者:  Xu, Jin;  Zhang, Yunzeng;  Zhang, Pengfan;  Trivedi, Pankaj;  Riera, Nadia;  Wang, Yayu;  Liu, Xin;  Fan, Guangyi;  Tang, Jiliang;  Coletta-Filho, Helvecio D.;  Cubero, Jaime;  Deng, Xiaoling;  Ancona, Veronica;  Lu, Zhanjun;  Zhong, Balian;  Roper, M. Caroline;  Capote, Nieves;  Catara, Vittoria;  Pietersen, Gerhard;  Verniere, Christian;  Al-Sadi, Abdullah M.;  Li, Lei;  Yang, Fan;  Xu, Xun;  Wang, Jian;  Yang, Huanming;  Jin, Tao;  Wang, Nian
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27
Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis 期刊论文
SCIENCE, 2018, 361 (6398)
作者:  Griesmann, Maximilian;  Chang, Yue;  Liu, Xin;  Song, Yue;  Haberer, Georg;  Crook, Matthew B.;  Billault-Penneteau, Benjamin;  Lauressergues, Dominique;  Keller, Jean;  Imanishi, Leandro;  Roswanjaya, Yuda Purwana;  Kohlen, Wouter;  Pujic, Petar;  Battenberg, Kai;  Alloisio, Nicole;  Liang, Yuhu;  Hilhorst, Henk;  Salgado, Marco G.;  Hocher, Valerie;  Gherbi, Hassen;  Svistoonoff, Sergio;  Doyle, Jeff J.;  He, Shixu;  Xu, Yan;  Xu, Shanyun;  Qu, Jing;  Gao, Qiang;  Fang, Xiaodong;  Fu, Yuan;  Normand, Philippe;  Berry, Alison M.;  Wall, Luis G.;  Ane, Jean-Michel;  Pawlowski, Katharina;  Xu, Xun;  Yang, Huanming;  Spannagl, Manuel;  Mayer, Klaus F. X.;  Wong, Gane Ka-Shu;  Parniske, Martin;  Delaux, Pierre-Marc;  Cheng, Shifeng
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/27
A future land use simulation model (FLUS) for simulating multiple land use scenarios by coupling human and natural effects 期刊论文
LANDSCAPE AND URBAN PLANNING, 2017, 168
作者:  Liu, Xiaoping;  Liang, Xun;  Li, Xia;  Xu, Xiaocong;  Ou, Jinpei;  Chen, Yimin;  Li, Shaoying;  Wang, Shaojian;  Pei, Fengsong
收藏  |  浏览/下载:8/0  |  提交时间:2019/04/09
Land use and land cover change  Land use simulation  System dynamics  Cellular automata  FLUS  Human and natural effects  
Deep functional analysis of synII, a 770-kilobase synthetic yeast chromosome 期刊论文
SCIENCE, 2017, 355 (6329)
作者:  Shen, Yue;  Wang, Yun;  Chen, Tai;  Gao, Feng;  Gong, Jianhui;  Abramczyk, Dariusz;  Walker, Roy;  Zhao, Hongcui;  Chen, Shihong;  Liu, Wei;  Luo, Yisha;  Mueller, Carolin A.;  Paul-Dubois-Taine, Adrien;  Alver, Bonnie;  Stracquadanio, Giovanni;  Mitchell, Leslie A.;  Luo, Zhouqing;  Fan, Yanqun;  Zhou, Baojin;  Wen, Bo;  Tan, Fengji;  Wang, Yujia;  Zi, Jin;  Xie, Zexiong;  Li, Bingzhi;  Yang, Kun;  Richardson, Sarah M.;  Jiang, Hui;  French, Christopher E.;  Nieduszynski, Conrad A.;  Koszul, Romain;  Marston, Adele L.;  Yuan, Yingjin;  Wang, Jian;  Bader, Joel S.;  Dai, Junbiao;  Boeke, Jef D.;  Xu, Xun;  Cai, Yizhi;  Yang, Huanming
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27