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Preventing Engrailed-1 activation in fibroblasts yields wound regeneration without scarring 期刊论文
Science, 2021
作者:  Shamik Mascharak;  Heather E. desJardins-Park;  Michael F. Davitt;  Michelle Griffin;  Mimi R. Borrelli;  Alessandra L. Moore;  Kellen Chen;  Bryan Duoto;  Malini Chinta;  Deshka S. Foster;  Abra H. Shen;  Michael Januszyk;  Sun Hyung Kwon;  Gerlinde Wernig;  Derrick C. Wan;  H. Peter Lorenz;  Geoffrey C. Gurtner;  Michael T. Longaker
收藏  |  浏览/下载:15/0  |  提交时间:2021/04/29
Perceptions of the appropriate response to norm violation in 57 societies 期刊论文
Nature Communications, 2021
作者:  Kimmo Eriksson;  Pontus Strimling;  Michele Gelfand;  Junhui Wu;  Jered Abernathy;  Charity S. Akotia;  Alisher Aldashev;  Per A. Andersson;  Giulia Andrighetto;  Adote Anum;  Gizem Arikan;  Zeynep Aycan;  Fatemeh Bagherian;  Davide Barrera;  Dana Basnight-Brown;  Birzhan Batkeyev;  Anabel Belaus;  Elizaveta Berezina;  Marie Bjö;  rnstjerna;  Sheyla Blumen;  Paweł;  Boski;  Fouad Bou Zeineddine;  Inna Bovina;  Bui Thi Thu Huyen;  Juan-Camilo Cardenas;  Đ;  orđ;  e Č;  ekrlija;  Hoon-Seok Choi;  Carlos C. Contreras-Ibá;  ñ;  ez;  Rui Costa-Lopes;  ;  cheá;  l de Barra;  Piyanjali de Zoysa;  Angela Dorrough;  Nikolay Dvoryanchikov;  Anja Eller;  Jan B. Engelmann;  Hyun Euh;  Xia Fang;  Susann Fiedler;  Olivia A. Foster-Gimbel;  ;  rta Fü;  ;  p;  Ragna B. Gardarsdottir;  C. M. Hew D. Gill;  Andreas Glö;  ckner;  Sylvie Graf;  Ani Grigoryan;  Vladimir Gritskov;  Katarzyna Growiec;  Peter Halama;  Andree Hartanto;  Tim Hopthrow;  Martina Hř;  ebí;  č;  ková;  Dzintra Iliš;  ko;  Hirotaka Imada;  Hansika Kapoor;  Kerry Kawakami;  Narine Khachatryan;  Natalia Kharchenko;  Ninetta Khoury;  Toko Kiyonari;  Michal Kohú;  t;  ;  Thuỳ;  Linh;  Lisa M. Leslie;  Yang Li;  Norman P. Li;  Zhuo Li;  Kadi Liik;  Angela T. Maitner;  Bernardo Manhique;  Harry Manley;  Imed Medhioub;  Sari Mentser;  Linda Mohammed;  Pegah Nejat;  Orlando Nipassa;  Ravit Nussinson;  Nneoma G. Onyedire;  Ike E. Onyishi;  Seniha Ö;  zden;  Penny Panagiotopoulou;  Lorena R. Perez-Floriano;  Minna S. Persson;  Mpho Pheko;  Anna-Maija Pirttilä;  -Backman;  Marianna Pogosyan;  Jana Raver;  Cecilia Reyna;  Ricardo Borges Rodrigues;  Sara Romanò;  Pedro P. Romero;  Inari Sakki;  Alvaro San Martin;  Sara Sherbaji;  Hiroshi Shimizu;  Brent Simpson;  Erna Szabo;  Kosuke Takemura;  Hassan Tieffi;  Maria Luisa Mendes Teixeira;  Napoj Thanomkul;  Habib Tiliouine;  Giovanni A. Travaglino;  Yannis Tsirbas;  Richard Wan;  Sita Widodo;  Rizqy Zein;  Qing-peng Zhang;  Lina Zirganou-Kazolea;  Paul A. M. Van Lange
收藏  |  浏览/下载:13/0  |  提交时间:2021/03/12
Importance of Uncertainties in the Spatial Distribution of Pre‐Industrial Wildfires for Estimating Aerosol Radiative Forcing 期刊论文
Geophysical Research Letters, 2021
作者:  J. S. Wan;  D. S. Hamilton;  N. M. Mahowald
收藏  |  浏览/下载:5/0  |  提交时间:2021/02/17
DNA vaccine protection against SARS-CoV-2 in rhesus macaques 期刊论文
Science, 2020
作者:  Jingyou Yu;  Lisa H. Tostanoski;  Lauren Peter;  Noe B. Mercado;  Katherine McMahan;  Shant H. Mahrokhian;  Joseph P. Nkolola;  Jinyan Liu;  Zhenfeng Li;  Abishek Chandrashekar;  David R. Martinez;  Carolin Loos;  Caroline Atyeo;  Stephanie Fischinger;  John S. Burke;  Matthew D. Slein;  Yuezhou Chen;  Adam Zuiani;  Felipe J. N. Lelis;  Meghan Travers;  Shaghayegh Habibi;  Laurent Pessaint;  Alex Van Ry;  Kelvin Blade;  Renita Brown;  Anthony Cook;  Brad Finneyfrock;  Alan Dodson;  Elyse Teow;  Jason Velasco;  Roland Zahn;  Frank Wegmann;  Esther A. Bondzie;  Gabriel Dagotto;  Makda S. Gebre;  Xuan He;  Catherine Jacob-Dolan;  Marinela Kirilova;  Nicole Kordana;  Zijin Lin;  Lori F. Maxfield;  Felix Nampanya;  Ramya Nityanandam;  John D. Ventura;  Huahua Wan;  Yongfei Cai;  Bing Chen;  Aaron G. Schmidt;  Duane R. Wesemann;  Ralph S. Baric;  Galit Alter;  Hanne Andersen;  Mark G. Lewis;  Dan H. Barouch
收藏  |  浏览/下载:17/0  |  提交时间:2020/08/18
Sensitivity Study of Weather Research and Forecasting Physical Schemes and Evaluation of Cool Coating Effects in Singapore by Weather Research and Forecasting Coupled with Urban Canopy Model Simulations 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2020, 125 (13)
作者:  Zhou, Mandi;  Long, Yongping;  Zhang, Xiaoqin;  Donthu, Eswara V. S. K. K.;  Ng, Bing Feng;  Wan, Man Pun
收藏  |  浏览/下载:13/0  |  提交时间:2020/08/18
Impaired cell fate through gain-of-function mutations in a chromatin reader 期刊论文
NATURE, 2020, 577 (7788) : 121-+
作者:  Wan, Liling;  Chong, Shasha;  Xuan, Fan;  Liang, Angela;  Cui, Xiaodong;  Gates, Leah;  Carroll, Thomas S.;  Li, Yuanyuan;  Feng, Lijuan;  Chen, Guochao;  Wang, Shu-Ping;  Ortiz, Michael V.;  Daley, Sara K.;  Wang, Xiaolu;  Xuan, Hongwen;  Kentsis, Alex;  Muir, Tom W.;  Roeder, Robert G.;  Li, Haitao;  Li, Wei;  Tjian, Robert;  Wen, Hong;  Allis, C. David
收藏  |  浏览/下载:10/0  |  提交时间:2020/07/03

Modifications of histone proteins have essential roles in normal development and human disease. Recognition of modified histones by '  reader'  proteins is a key mechanism that mediates the function of histone modifications, but how the dysregulation of these readers might contribute to disease remains poorly understood. We previously identified the ENL protein as a reader of histone acetylation via its YEATS domain, linking it to the expression of cancer-driving genes in acute leukaemia1. Recurrent hotspot mutations have been found in the ENL YEATS domain in Wilms tumour2,3, the most common type of paediatric kidney cancer. Here we show, using human and mouse cells, that these mutations impair cell-fate regulation by conferring gain-of-function in chromatin recruitment and transcriptional control. ENL mutants induce gene-expression changes that favour a premalignant cell fate, and, in an assay for nephrogenesis using murine cells, result in undifferentiated structures resembling those observed in human Wilms tumour. Mechanistically, although bound to largely similar genomic loci as the wild-type protein, ENL mutants exhibit increased occupancy at a subset of targets, leading to a marked increase in the recruitment and activity of transcription elongation machinery that enforces active transcription from target loci. Furthermore, ectopically expressed ENL mutants exhibit greater self-association and form discrete and dynamic nuclear puncta that are characteristic of biomolecular hubs consisting of local high concentrations of regulatory factors. Such mutation-driven ENL self-association is functionally linked to enhanced chromatin occupancy and gene activation. Collectively, our findings show that hotspot mutations in a chromatinreader domain drive self-reinforced recruitment, derailing normal cell-fate control during development and leading to an oncogenic outcome.


  
A neurotransmitter produced by gut bacteria modulates host sensory behaviour 期刊论文
NATURE, 2020
作者:  Zhao, Xiaoxu;  Song, Peng;  Wang, Chengcai;  Riis-Jensen, Anders C.;  Fu, Wei;  Deng, Ya;  Wan, Dongyang;  Kang, Lixing;  Ning, Shoucong;  Dan, Jiadong;  Venkatesan, T.;  Liu, Zheng;  Zhou, Wu;  Thygesen, Kristian S.;  Luo, Xin;  Pennycook, Stephen J.;  Loh, Kian Ping
收藏  |  浏览/下载:8/0  |  提交时间:2020/07/03

A neuromodulator produced by commensalProvidenciabacteria that colonize the gut ofCaenorhabditis elegansmimics the functions of the cognate host molecule to manipulate a sensory decision of the host.


Animals coexist in commensal, pathogenic or mutualistic relationships with complex communities of diverse organisms, including microorganisms(1). Some bacteria produce bioactive neurotransmitters that have previously been proposed to modulate nervous system activity and behaviours of their hosts(2,3). However, the mechanistic basis of this microbiota-brain signalling and its physiological relevance are largely unknown. Here we show that inCaenorhabditis elegans, the neuromodulator tyramine produced by commensalProvidenciabacteria, which colonize the gut, bypasses the requirement for host tyramine biosynthesis and manipulates a host sensory decision. Bacterially produced tyramine is probably converted to octopamine by the host tyramine beta-hydroxylase enzyme. Octopamine, in turn, targets the OCTR-1 octopamine receptor on ASH nociceptive neurons to modulate an aversive olfactory response. We identify the genes that are required for tyramine biosynthesis inProvidencia, and show that these genes are necessary for the modulation of host behaviour. We further find thatC. eleganscolonized byProvidenciapreferentially select these bacteria in food choice assays, and that this selection bias requires bacterially produced tyramine and host octopamine signalling. Our results demonstrate that a neurotransmitter produced by gut bacteria mimics the functions of the cognate host molecule to override host control of a sensory decision, and thereby promotes fitness of both the host and the microorganism.


  
Diurnal Variation of Meiyu Rainfall in the Yangtze Plain During Atypical Meiyu Years 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2020, 125 (1)
作者:  Zhang, A. Q.;  Chen, Y. L.;  Zhou, S. N.;  Cui, C. G.;  Wan, R.;  Fu, Y. F.
收藏  |  浏览/下载:5/0  |  提交时间:2020/07/02
Patterns of somatic structural variation in human cancer genomes 期刊论文
NATURE, 2020, 578 (7793) : 112-+
作者:  Wan, Liling;  Chong, Shasha;  Xuan, Fan;  Liang, Angela;  Cui, Xiaodong;  Gates, Leah;  Carroll, Thomas S.;  Li, Yuanyuan;  Feng, Lijuan;  Chen, Guochao;  Wang, Shu-Ping;  Ortiz, Michael V.;  Daley, Sara K.;  Wang, Xiaolu;  Xuan, Hongwen;  Kentsis, Alex;  Muir, Tom W.;  Roeder, Robert G.;  Li, Haitao;  Li, Wei;  Tjian, Robert;  Wen, Hong;  Allis, C. David
收藏  |  浏览/下载:36/0  |  提交时间:2020/07/03

A key mutational process in cancer is structural variation, in which rearrangements delete, amplify or reorder genomic segments that range in size from kilobases to whole chromosomes(1-7). Here we develop methods to group, classify and describe somatic structural variants, using data from the Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium of the International Cancer Genome Consortium (ICGC) and The Cancer Genome Atlas (TCGA), which aggregated whole-genome sequencing data from 2,658 cancers across 38 tumour types(8). Sixteen signatures of structural variation emerged. Deletions have a multimodal size distribution, assort unevenly across tumour types and patients, are enriched in late-replicating regions and correlate with inversions. Tandem duplications also have a multimodal size distribution, but are enriched in early-replicating regions-as are unbalanced translocations. Replication-based mechanisms of rearrangement generate varied chromosomal structures with low-level copy-number gains and frequent inverted rearrangements. One prominent structure consists of 2-7 templates copied from distinct regions of the genome strung together within one locus. Such cycles of templated insertions correlate with tandem duplications, and-in liver cancerfrequently activate the telomerase gene TERT. A wide variety of rearrangement processes are active in cancer, which generate complex configurations of the genome upon which selection can act.


  
Depth- and Time-Resolved Distributions of Snowmelt-Driven Hillslope Subsurface Flow and Transport and Their Contributions to Surface Waters 期刊论文
WATER RESOURCES RESEARCH, 2019
作者:  Tokunaga, Tetsu K.;  Wan, Jiamin;  Williams, Kenneth H.;  Brown, Wendy;  Henderson, Amanda;  Kim, Yongman;  Tran, Anh Phuong;  Conrad, Mark E.;  Bill, Markus;  Carroll, Rosemary W. H.;  Dong, Wenming;  Xu, Zexuan;  Lavy, Adi;  Gilbert, Ben;  Romero, Sergio;  Christensen, John N.;  Faybishenko, Boris;  Arora, Bhavna;  Siirila-Woodburn, Erica R.;  Versteeg, Roelof;  Raberg, Jonathan H.;  Peterson, John E.;  Hubbard, Susan S.
收藏  |  浏览/下载:10/0  |  提交时间:2020/02/16
recharge  hillslope  transmissivity  concentration-discharge  groundwater  snowmelt