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Research round-up 期刊论文
NATURE, 2020, 579 (7800) : S20-S20
作者:  Uzoigwe, Chika
收藏  |  浏览/下载:4/0  |  提交时间:2020/07/03

Cancer traps, artificial intelligence and other highlights from clinical trials and laboratory studies.


Cancer traps, artificial intelligence and other highlights from clinical trials and laboratory studies.


  
Hummingbird-sized dinosaur from the Cretaceous period of Myanmar 期刊论文
NATURE, 2020, 579 (7798) : 245-+
作者:  McBrien, Julia Bergild;  Mavigner, Maud;  Franchitti, Lavinia;  Smith, S. Abigail;  White, Erick;  Tharp, Gregory K.;  Walum, Hasse;  Busman-Sahay, Kathleen;  Aguilera-Sandoval, Christian R.;  Thayer, William O.;  Spagnuolo, Rae Ann;  Kovarova, Martina;  Wahl, Angela;  Cervasi, Barbara;  Margolis, David M.
收藏  |  浏览/下载:5/0  |  提交时间:2020/05/13

Skeletal inclusions in approximately 99-million-year-old amber from northern Myanmar provide unprecedented insights into the soft tissue and skeletal anatomy of minute fauna, which are not typically preserved in other depositional environments(1-3). Among a diversity of vertebrates, seven specimens that preserve the skeletal remains of enantiornithine birds have previously been described(1,4-8), all of which (including at least one seemingly mature specimen) are smaller than specimens recovered from lithic materials. Here we describe an exceptionally well-preserved and diminutive bird-like skull that documents a new species, which we name Oculudentavis khaungraae gen. et sp. nov. The find appears to represent the smallest known dinosaur of the Mesozoic era, rivalling the bee hummingbird (Mellisuga helenae)-the smallest living bird-in size. The O. khaungraae specimen preserves features that hint at miniaturization constraints, including a unique pattern of cranial fusion and an autapomorphic ocular morphology(9) that resembles the eyes of lizards. The conically arranged scleral ossicles define a small pupil, indicative of diurnal activity. Miniaturization most commonly arises in isolated environments, and the diminutive size of Oculudentavis is therefore consistent with previous suggestions that this amber formed on an island within the Trans-Tethyan arc(10). The size and morphology of this species suggest a previously unknown bauplan, and a previously undetected ecology. This discovery highlights the potential of amber deposits to reveal the lowest limits of vertebrate body size.


  
Preindustrial (CH4)-C-14 indicates greater anthropogenic fossil CH4 emissions 期刊论文
NATURE, 2020, 578 (7795) : 409-+
作者:  Keener, Megan;  Hunt, Camden;  Carroll, Timothy G.;  Kampel, Vladimir;  Dobrovetsky, Roman;  Hayton, Trevor W.;  Menard, Gabriel
收藏  |  浏览/下载:25/0  |  提交时间:2020/05/13

Atmospheric methane (CH4) is a potent greenhouse gas, and its mole fraction has more than doubled since the preindustrial era(1). Fossil fuel extraction and use are among the largest anthropogenic sources of CH4 emissions, but the precise magnitude of these contributions is a subject of debate(2,3). Carbon-14 in CH4 ((CH4)-C-14) can be used to distinguish between fossil (C-14-free) CH4 emissions and contemporaneous biogenic sources  however, poorly constrained direct (CH4)-C-14 emissions from nuclear reactors have complicated this approach since the middle of the 20th century(4,5). Moreover, the partitioning of total fossil CH4 emissions (presently 172 to 195 teragrams CH4 per year)(2,3) between anthropogenic and natural geological sources (such as seeps and mud volcanoes) is under debate  emission inventories suggest that the latter account for about 40 to 60 teragrams CH4 per year(6,7). Geological emissions were less than 15.4 teragrams CH4 per year at the end of the Pleistocene, about 11,600 years ago(8), but that period is an imperfect analogue for present-day emissions owing to the large terrestrial ice sheet cover, lower sea level and extensive permafrost. Here we use preindustrial-era ice core (CH4)-C-14 measurements to show that natural geological CH4 emissions to the atmosphere were about 1.6 teragrams CH4 per year, with a maximum of 5.4 teragrams CH4 per year (95 per cent confidence limit)-an order of magnitude lower than the currently used estimates. This result indicates that anthropogenic fossil CH4 emissions are underestimated by about 38 to 58 teragrams CH4 per year, or about 25 to 40 per cent of recent estimates. Our record highlights the human impact on the atmosphere and climate, provides a firm target for inventories of the global CH4 budget, and will help to inform strategies for targeted emission reductions(9,10).


Isotopic evidence from ice cores indicates that preindustrial-era geological methane emissions were lower than previously thought, suggesting that present-day emissions of methane from fossil fuels are underestimated.


  
Nagaoka ferromagnetism observed in a quantum dot plaquette 期刊论文
NATURE, 2020, 579 (7800) : 528-533
作者:  Yu, Yong;  Ma, Fei;  Luo, Xi-Yu;  Jing, Bo;  Sun, Peng-Fei;  Fang, Ren-Zhou;  Yang, Chao-Wei;  Liu, Hui;  Zheng, Ming-Yang;  Xie, Xiu-Ping;  Zhang, Wei-Jun;  You, Li-Xing;  Wang, Zhen;  Chen, Teng-Yun;  Zhang, Qiang;  Bao, Xiao-Hui;  Pan, Jian-Wei
收藏  |  浏览/下载:31/0  |  提交时间:2020/07/03

A quantum dot device designed to host four electrons is used to demonstrate Nagaoka ferromagnetism-a model of itinerant magnetism that has so far been limited to theoretical investigation.


Engineered, highly controllable quantum systems are promising simulators of emergent physics beyond the simulation capabilities of classical computers(1). An important problem in many-body physics is itinerant magnetism, which originates purely from long-range interactions of free electrons and whose existence in real systems has been debated for decades(2,3). Here we use a quantum simulator consisting of a four-electron-site square plaquette of quantum dots(4) to demonstrate Nagaoka ferromagnetism(5). This form of itinerant magnetism has been rigorously studied theoretically(6-9) but has remained unattainable in experiments. We load the plaquette with three electrons and demonstrate the predicted emergence of spontaneous ferromagnetic correlations through pairwise measurements of spin. We find that the ferromagnetic ground state is remarkably robust to engineered disorder in the on-site potentials and we can induce a transition to the low-spin state by changing the plaquette topology to an open chain. This demonstration of Nagaoka ferromagnetism highlights that quantum simulators can be used to study physical phenomena that have not yet been observed in any experimental system. The work also constitutes an important step towards large-scale quantum dot simulators of correlated electron systems.


  
A new coronavirus associated with human respiratory disease in China 期刊论文
NATURE, 2020, 579 (7798) : 265-+
作者:  Rollie, Clare;  Chevallereau, Anne;  Watson, Bridget N. J.;  Chyou, Te-yuan;  Fradet, Olivier;  McLeod, Isobel;  Fineran, Peter C.;  Brown, Chris M.;  Gandon, Sylvain;  Westra, Edze R.
收藏  |  浏览/下载:56/0  |  提交时间:2020/07/03

Emerging infectious diseases, such as severe acute respiratory syndrome (SARS) and Zika virus disease, present a major threat to public health(1-3). Despite intense research efforts, how, when and where new diseases appear are still a source of considerable uncertainty. A severe respiratory disease was recently reported in Wuhan, Hubei province, China. As of 25 January 2020, at least 1,975 cases had been reported since the first patient was hospitalized on 12 December 2019. Epidemiological investigations have suggested that the outbreak was associated with a seafood market in Wuhan. Here we study a single patient who was a worker at the market and who was admitted to the Central Hospital of Wuhan on 26 December 2019 while experiencing a severe respiratory syndrome that included fever, dizziness and a cough. Metagenomic RNA sequencing(4) of a sample of bronchoalveolar lavage fluid from the patient identified a new RNA virus strain from the family Coronaviridae, which is designated here '  WH-Human 1'  coronavirus (and has also been referred to as '  2019-nCoV'  ). Phylogenetic analysis of the complete viral genome (29,903 nucleotides) revealed that the virus was most closely related (89.1% nucleotide similarity) to a group of SARS-like coronaviruses (genus Betacoronavirus, subgenus Sarbecovirus) that had previously been found in bats in China(5). This outbreak highlights the ongoing ability of viral spill-over from animals to cause severe disease in humans.


  
B cells and tertiary lymphoid structures promote immunotherapy response 期刊论文
NATURE, 2020, 577 (7791) : 549-+
作者:  Zhang, Liangsheng;  Chen, Fei;  Zhang, Xingtan;  Li, Zhen;  Zhao, Yiyong;  Lohaus, Rolf;  Chang, Xiaojun;  Dong, Wei;  Ho, Simon Y. W.;  Liu, Xing;  Song, Aixia;  Chen, Junhao;  Guo, Wenlei;  Wang, Zhengjia;  Zhuang, Yingyu;  Wang, Haifeng;  Chen, Xuequn;  Hu, Juan;  Liu, Yanhui;  Qin, Yuan;  Wang, Kai;  Dong, Shanshan;  Liu, Yang;  Zhang, Shouzhou;  Yu, Xianxian;  Wu, Qian;  Wang, Liangsheng;  Yan, Xueqing;  Jiao, Yuannian;  Kong, Hongzhi;  Zhou, Xiaofan;  Yu, Cuiwei;  Chen, Yuchu;  Li, Fan;  Wang, Jihua;  Chen, Wei;  Chen, Xinlu;  Jia, Qidong;  Zhang, Chi;  Jiang, Yifan;  Zhang, Wanbo;  Liu, Guanhua;  Fu, Jianyu;  Chen, Feng;  Ma, Hong;  Van de Peer, Yves;  Tang, Haibao
收藏  |  浏览/下载:42/0  |  提交时间:2020/07/03

Multiomic profiling of several cohorts of patients treated with immune checkpoint blockade highlights the presence and potential role of B cells and tertiary lymphoid structures in promoting therapy response.


Treatment with immune checkpoint blockade (ICB) has revolutionized cancer therapy. Until now, predictive biomarkers(1-10) and strategies to augment clinical response have largely focused on the T cell compartment. However, other immune subsets may also contribute to anti-tumour immunity(11-15), although these have been less well-studied in ICB treatment(16). A previously conducted neoadjuvant ICB trial in patients with melanoma showed via targeted expression profiling(17) that B cell signatures were enriched in the tumours of patients who respond to treatment versus non-responding patients. To build on this, here we performed bulk RNA sequencing and found that B cell markers were the most differentially expressed genes in the tumours of responders versus non-responders. Our findings were corroborated using a computational method (MCP-counter(18)) to estimate the immune and stromal composition in this and two other ICB-treated cohorts (patients with melanoma and renal cell carcinoma). Histological evaluation highlighted the localization of B cells within tertiary lymphoid structures. We assessed the potential functional contributions of B cells via bulk and single-cell RNA sequencing, which demonstrate clonal expansion and unique functional states of B cells in responders. Mass cytometry showed that switched memory B cells were enriched in the tumours of responders. Together, these data provide insights into the potential role of B cells and tertiary lymphoid structures in the response to ICB treatment, with implications for the development of biomarkers and therapeutic targets.


  
Progress in and promise of bacterial quorum sensing research 期刊论文
NATURE, 2017, 551 (7680) : 313-320
作者:  Whiteley, Marvin;  Diggle, Stephen P.;  Greenberg, E. Peter
收藏  |  浏览/下载:1/0  |  提交时间:2019/11/27
A single-cell RNA-seq survey of the developmental landscape of the human prefrontal cortex 期刊论文
NATURE, 2018, 555 (7697) : 524-+
作者:  Zhong, Suijuan;  Zhang, Shu;  Fan, Xiaoying;  Wu, Qian;  Yan, Liying;  Dong, Ji;  Zhang, Haofeng;  Li, Long;  Sun, Le;  Pan, Na;  Xu, Xiaohui;  Tang, Fuchou;  Zhang, Jun;  Qiao, Jie;  Wang, Xiaoqun
收藏  |  浏览/下载:12/0  |  提交时间:2019/11/27
Observation of two-neutrino double electron capture in Xe-124 with XENON1T 期刊论文
NATURE, 2019, 568 (7753) : 532-+
作者:  Aprile, E.;  Aalbers, J.;  Agostini, F.;  Alfonsi, M.;  Althueser, L.;  Amaro, F. D.;  Anthony, M.;  Antochi, V. C.;  Arneodo, F.;  Baudis, L.;  Bauermeister, B.;  Benabderrahmane, L.;  Berger, T.;  Breur, P. A.;  Brown, A.;  Brown, A.;  Brown, E.;  Bruenner, S.;  Bruno, G.;  Budnik, R.;  Capelli, C.;  Cardoso, J. M. R.;  Cichon, D.;  Coderre, D.;  Colijn, A. P.;  Conrad, J.;  Cussonneau, J. P.;  Decowski, M. P.;  de Perio, P.;  Di Gangi, P.;  Di Giovanni, A.;  Diglio, S.;  Elykov, A.;  Eurin, G.;  Fei, J.;  Ferella, A. D.;  Fieguth, A.;  Fulgione, W.;  Rosso, A. Gallo;  Galloway, M.;  Gao, F.;  Garbini, M.;  Grandi, L.;  Greene, Z.;  Hasterok, C.;  Hogenbirk, E.;  Howlett, J.;  Iacovacci, M.;  Itay, R.;  Joerg, F.;  Kaminsky, B.;  Kazama, S.;  Kish, A.;  Koltman, G.;  Kopec, A.;  Landsman, H.;  Lang, R. F.;  Levinson, L.;  Lin, Q.;  Lindemann, S.;  Lindner, M.;  Lombardi, F.;  Lopes, J. A. M.;  Fune, E. Lopez;  Macolino, C.;  Mahlstedt, J.;  Manfredini, A.;  Marignetti, F.;  Undagoitia, T. Marrodan;  Masbou, J.;  Masson, D.;  Mastroianni, S.;  Messina, M.;  Micheneau, K.;  Miller, K.;  Molinario, A.;  Mora, K.;  Murra, M.;  Naganoma, J.;  Ni, K.;  Oberlack, U.;  Odgers, K.;  Pelssers, B.;  Peres, R.;  Piastra, F.;  Pienaar, J.;  Pizzella, V.;  Plante, G.;  Podviianiuk, R.;  Priel, N.;  Qiu, H.;  Garcia, D. Ramirez;  Reichard, S.;  Riedel, B.;  Rizzo, A.;  Rocchetti, A.;  Rupp, N.;  dos Santos, J. M. F.;  Sartorelli, G.;  Sarcevic, N.;  Scheibelhut, M.;  Schindler, S.;  Schreiner, J.;  Schulte, D.;  Schumann, M.;  Lavina, L. Scotto;  Selvi, M.;  Shagin, P.;  Shockley, E.;  Silva, M.;  Simgen, H.;  Therreau, C.;  Thers, D.;  Toschi, F.;  Trinchero, G.;  Tunnell, C.;  Upole, N.;  Vargas, M.;  Wack, O.;  Wang, H.;  Wang, Z.;  Wei, Y.;  Weinheimer, C.;  Wenz, D.;  Wittweg, C.;  Wulf, J.;  Ye, J.;  Zhang, Y.;  Zhu, T.;  Zopounidis, J. P.
收藏  |  浏览/下载:14/0  |  提交时间:2019/11/27
Complex pectin metabolism by gut bacteria reveals novel catalytic functions 期刊论文
NATURE, 2017, 544 (7648) : 65-+
作者:  Ndeh, Didier;  39;Neill, Malcolm A.
收藏  |  浏览/下载:0/0  |  提交时间:2019/11/27