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Long-Term Associations between Disaster-Related Home Loss and Health and Well-Being of Older Survivors: Nine Years after the 2011 Great East Japan Earthquake and Tsunami 期刊论文
Environmental Health Perspectives, 2022
作者:  Koichiro Shiba;  Hiroyuki Hikichi;  Sakurako S. Okuzono;  Tyler J. VanderWeele;  Mariana Arcaya;  Adel Daoud;  Richard G. Cowden;  Aki Yazawa;  David T. Zhu;  Jun Aida;  Katsunori Kondo;  Ichiro Kawachi
收藏  |  浏览/下载:8/0  |  提交时间:2022/07/08
Evaluation of a Wastewater-Based Epidemiological Approach to Estimate the Prevalence of SARS-CoV-2 Infections and the Detection of Viral Variants in Disparate Oregon Communities at City and Neighborhood Scales 期刊论文
Environmental Health Perspectives, 2022
作者:  Blythe A. Layton;  Devrim Kaya;  Christine Kelly;  Kenneth J. Williamson;  Dana Alegre;  Silke M. Bachhuber;  Peter G. Banwarth;  Jeffrey W. Bethel;  Katherine Carter;  Benjamin D. Dalziel;  Mark Dasenko;  Matthew Geniza;  Andrea George;  Anne-Marie Girard;  Roy Haggerty;  Kathryn A. Higley;  Denise M. Hynes;  Jane Lubchenco;  Katherine R. McLaughlin;  F. Javier Nieto;  Aslan Noakes;  Matthew Peterson;  Adriana D. Piemonti;  Justin L. Sanders;  Brett M. Tyler;  Tyler S. Radniecki
收藏  |  浏览/下载:12/0  |  提交时间:2022/07/08
Ultrapotent antibodies against diverse and highly transmissible SARS-CoV-2 variants 期刊论文
Science, 2021
作者:  Lingshu Wang;  Tongqing Zhou;  Yi Zhang;  Eun Sung Yang;  Chaim A. Schramm;  Wei Shi;  Amarendra Pegu;  Olamide K. Oloniniyi;  Amy R. Henry;  Samuel Darko;  Sandeep R. Narpala;  Christian Hatcher;  David R. Martinez;  Yaroslav Tsybovsky;  Emily Phung;  Olubukola M. Abiona;  Avan Antia;  Evan M. Cale;  Lauren A. Chang;  Misook Choe;  Kizzmekia S. Corbett;  Rachel L. Davis;  Anthony T. DiPiazza;  Ingelise J. Gordon;  Sabrina Helmold Hait;  Tandile Hermanus;  Prudence Kgagudi;  Farida Laboune;  Kwanyee Leung;  Tracy Liu;  Rosemarie D. Mason;  Alexandra F. Nazzari;  Laura Novik;  Sarah O’Connell;  Sijy O’Dell;  Adam S. Olia;  Stephen D. Schmidt;  Tyler Stephens;  Christopher D. Stringham;  Chloe Adrienna Talana;  I-Ting Teng;  Danielle A. Wagner;  Alicia T. Widge;  Baoshan Zhang;  Mario Roederer;  Julie E. Ledgerwood;  Tracy J. Ruckwardt;  Martin R. Gaudinski;  Penny L. Moore;  Nicole A. Doria-Rose;  Ralph S. Baric;  Barney S. Graham;  Adrian B. McDermott;  Daniel C. Douek;  Peter D. Kwong;  John R. Mascola;  Nancy J. Sullivan;  John Misasi
收藏  |  浏览/下载:21/0  |  提交时间:2021/08/17
Future sea level change under CMIP5 and CMIP6 scenarios from the Greenland and Antarctic ice sheets 期刊论文
Geophysical Research Letters, 2021
作者:  Antony J. Payne;  Sophie Nowicki;  Ayako Abe‐;  Ouchi;  ;  cile Agosta;  Patrick Alexander;  Torsten Albrecht;  Xylar Asay‐;  Davis;  Andy Aschwanden;  Alice Barthel;  Thomas J. Bracegirdle;  Reinhard Calov;  Christopher Chambers;  Youngmin Choi;  Richard Cullather;  Joshua Cuzzone;  Christophe Dumas;  Tamsin L. Edwards;  Denis Felikson;  Xavier Fettweis;  Benjamin K. Galton‐;  Fenzi;  Heiko Goelzer;  Rupert Gladstone;  Nicholas R. Golledge;  Jonathan M. Gregory;  Ralf Greve;  Tore Hattermann;  Matthew J. Hoffman;  Angelika Humbert;  Philippe Huybrechts;  Nicolas C. Jourdain;  Thomas Kleiner;  Peter Kuipers Munneke;  Eric Larour;  Sebastien Le clec'h;  Victoria Lee;  Gunter Leguy;  William H. Lipscomb;  Christopher M. Little;  Daniel P. Lowry;  Mathieu Morlighem;  Isabel Nias;  Frank Pattyn;  Tyler Pelle;  Stephen F. Price;  Auré;  lien Quiquet;  Ronja Reese;  Martin Rü;  ckamp;  Nicole‐;  Jeanne Schlegel;  ;  ;  ne Seroussi;  Andrew Shepherd;  Erika Simon;  Donald Slater;  Robin S. Smith;  Fiammetta Straneo;  Sainan Sun;  Lev Tarasov;  Luke D. Trusel;  Jonas Van Breedam;  Roderik van de Wal;  Michiel van den Broeke;  Ricarda Winkelmann;  Chen Zhao;  Tong Zhang;  Thomas Zwinger
收藏  |  浏览/下载:23/0  |  提交时间:2021/05/14
Prospective mapping of viral mutations that escape antibodies used to treat COVID-19 期刊论文
Science, 2021
作者:  Tyler N. Starr;  Allison J. Greaney;  Amin Addetia;  William W. Hannon;  Manish C. Choudhary;  Adam S. Dingens;  Jonathan Z. Li;  Jesse D. Bloom
收藏  |  浏览/下载:13/0  |  提交时间:2021/02/22
A global environmental crisis 42,000 years ago 期刊论文
Science, 2021
作者:  Alan Cooper;  Chris S. M. Turney;  Jonathan Palmer;  Alan Hogg;  Matt McGlone;  Janet Wilmshurst;  Andrew M. Lorrey;  Timothy J. Heaton;  James M. Russell;  Ken McCracken;  Julien G. Anet;  Eugene Rozanov;  Marina Friedel;  Ivo Suter;  Thomas Peter;  Raimund Muscheler;  Florian Adolphi;  Anthony Dosseto;  J. Tyler Faith;  Pavla Fenwick;  Christopher J. Fogwill;  Konrad Hughen;  Mathew Lipson;  Jiabo Liu;  Norbert Nowaczyk;  Eleanor Rainsley;  Christopher Bronk Ramsey;  Paolo Sebastianelli;  Yassine Souilmi;  Janelle Stevenson;  Zoë Thomas;  Raymond Tobler;  Roland Zech
收藏  |  浏览/下载:12/0  |  提交时间:2021/02/22
Quantifying and addressing the prevalence and bias of study designs in the environmental and social sciences 期刊论文
Nature Communications, 2020
作者:  Alec P. Christie;  David Abecasis;  Mehdi Adjeroud;  Juan C. Alonso;  Tatsuya Amano;  Alvaro Anton;  Barry P. Baldigo;  Rafael Barrientos;  Jake E. Bicknell;  Deborah A. Buhl;  Just Cebrian;  Ricardo S. Ceia;  Luciana Cibils-Martina;  Sarah Clarke;  Joachim Claudet;  Michael D. Craig;  Dominique Davoult;  Annelies De Backer;  Mary K. Donovan;  Tyler D. Eddy;  Filipe M. Franç;  a;  Jonathan P. A. Gardner;  Bradley P. Harris;  Ari Huusko;  Ian L. Jones;  Brendan P. Kelaher;  Janne S. Kotiaho;  Adrià;  ;  pez-Baucells;  Heather L. Major;  Aki Mä;  ki-Petä;  ys;  Beatriz Martí;  n;  Carlos A. Martí;  n;  Philip A. Martin;  Daniel Mateos-Molina;  Robert A. McConnaughey;  Michele Meroni;  Christoph F. J. Meyer;  Kade Mills;  Monica Montefalcone;  Norbertas Noreika;  Carlos Palací;  n;  Anjali Pande;  C. Roland Pitcher;  Carlos Ponce;  Matt Rinella;  Ricardo Rocha;  Marí;  a C. Ruiz-Delgado;  Juan J. Schmitter-Soto;  Jill A. Shaffer;  Shailesh Sharma;  Anna A. Sher;  Doriane Stagnol;  Thomas R. Stanley;  Kevin D. E. Stokesbury;  Aurora Torres;  Oliver Tully;  Teppo Vehanen;  Corinne Watts;  Qingyuan Zhao;  William J. Sutherland
收藏  |  浏览/下载:15/0  |  提交时间:2020/12/22
A triple-star system with a misaligned and warped circumstellar disk shaped by disk tearing 期刊论文
Science, 2020
作者:  Stefan Kraus;  Alexander Kreplin;  Alison K. Young;  Matthew R. Bate;  John D. Monnier;  Tim J. Harries;  Henning Avenhaus;  Jacques Kluska;  Anna S. E. Laws;  Evan A. Rich;  Matthew Willson;  Alicia N. Aarnio;  Fred C. Adams;  Sean M. Andrews;  Narsireddy Anugu;  Jaehan Bae;  Theo ten Brummelaar;  Nuria Calvet;  Michel Curé;  Claire L. Davies;  Jacob Ennis;  Catherine Espaillat;  Tyler Gardner;  Lee Hartmann;  Sasha Hinkley;  Aaron Labdon;  Cyprien Lanthermann;  Jean-Baptiste LeBouquin;  Gail H. Schaefer;  Benjamin R. Setterholm;  David Wilner;  Zhaohuan Zhu
收藏  |  浏览/下载:8/0  |  提交时间:2020/09/08
Structural basis of DNA targeting by a transposon-encoded CRISPR-Cas system 期刊论文
NATURE, 2020, 577 (7789) : 271-+
作者:  Halpin-Healy, Tyler S.;  Klompe, Sanne E.;  Sternberg, Samuel H.;  Fernandez, Israel S.
收藏  |  浏览/下载:5/0  |  提交时间:2020/07/03

Bacteria use adaptive immune systems encoded by CRISPR and Cas genes to maintain genomic integrity when challenged by pathogens and mobile genetic elements(1-3). Type I CRISPR-Cas systems typically target foreign DNA for degradation via joint action of the ribonucleoprotein complex Cascade and the helicase-nuclease Cas3(4,5), but nuclease-deficient type I systems lacking Cas3 have been repurposed for RNA-guided transposition by bacterial Tn7-like transposons(6,7). How CRISPR- and transposon-associated machineries collaborate during DNA targeting and insertion remains unknown. Here we describe structures of a TniQ-Cascade complex encoded by the Vibrio cholerae Tn6677 transposon using cryo-electron microscopy, revealing the mechanistic basis of this functional coupling. The cryo-electron microscopy maps enabled de novo modelling and refinement of the transposition protein TniQ, which binds to the Cascade complex as a dimer in a head-to-tail configuration, at the interface formed by Cas6 and Cas7 near the 3'  end of the CRISPR RNA (crRNA). The natural Cas8-Cas5 fusion protein binds the 5'  crRNA handle and contacts the TniQ dimer via a flexible insertion domain. A target DNA-bound structure reveals critical interactions necessary for protospacer-adjacent motif recognition and R-loop formation. This work lays the foundation for a structural understanding of how DNA targeting by TniQ-Cascade leads to downstream recruitment of additional transposase proteins, and will guide protein engineering efforts to leverage this system for programmable DNA insertions in genome-engineering applications.


  
Aurora Basin, the Weak Underbelly of East Antarctica 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2020, 47 (9)
作者:  Pelle, Tyler;  Morlighem, Mathieu;  McCormack, Felicity S.
收藏  |  浏览/下载:7/0  |  提交时间:2020/07/02
Aurora  Antarctica  Totten  modeling  mass  balance