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Evaluation of a Wastewater-Based Epidemiological Approach to Estimate the Prevalence of SARS-CoV-2 Infections and the Detection of Viral Variants in Disparate Oregon Communities at City and Neighborhood Scales 期刊论文
Environmental Health Perspectives, 2022
作者:  Blythe A. Layton;  Devrim Kaya;  Christine Kelly;  Kenneth J. Williamson;  Dana Alegre;  Silke M. Bachhuber;  Peter G. Banwarth;  Jeffrey W. Bethel;  Katherine Carter;  Benjamin D. Dalziel;  Mark Dasenko;  Matthew Geniza;  Andrea George;  Anne-Marie Girard;  Roy Haggerty;  Kathryn A. Higley;  Denise M. Hynes;  Jane Lubchenco;  Katherine R. McLaughlin;  F. Javier Nieto;  Aslan Noakes;  Matthew Peterson;  Adriana D. Piemonti;  Justin L. Sanders;  Brett M. Tyler;  Tyler S. Radniecki
收藏  |  浏览/下载:10/0  |  提交时间:2022/07/08
De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes 期刊论文
Science, 2021
作者:  Matthew B. Hufford;  Arun S. Seetharam;  Margaret R. Woodhouse;  Kapeel M. Chougule;  Shujun Ou;  Jianing Liu;  William A. Ricci;  Tingting Guo;  Andrew Olson;  Yinjie Qiu;  Rafael Della Coletta;  Silas Tittes;  Asher I. Hudson;  Alexandre P. Marand;  Sharon Wei;  Zhenyuan Lu;  Bo Wang;  Marcela K. Tello-Ruiz;  Rebecca D. Piri;  Na Wang;  Dong won Kim;  Yibing Zeng;  Christine H. O’Connor;  Xianran Li;  Amanda M. Gilbert;  Erin Baggs;  Ksenia V. Krasileva;  John L. Portwood;  Ethalinda K. S. Cannon;  Carson M. Andorf;  Nancy Manchanda;  Samantha J. Snodgrass;  David E. Hufnagel;  Qiuhan Jiang;  Sarah Pedersen;  Michael L. Syring;  David A. Kudrna;  Victor Llaca;  Kevin Fengler;  Robert J. Schmitz;  Jeffrey Ross-Ibarra;  Jianming Yu;  Jonathan I. Gent;  Candice N. Hirsch;  Doreen Ware;  R. Kelly Dawe
收藏  |  浏览/下载:18/0  |  提交时间:2021/08/10
Watershed and lake attributes dictate landscape patterns of resource flows in mountain lakes 期刊论文
Water Resources Research, 2021
作者:  Adrianne P Smits;  Bryan Currinder;  Nicholas Framsted;  Luke C Loken;  Delores Lucero;  Kelly A Neal;  Christine A Parisek;  Jim Sickman;  Steven Sadro
收藏  |  浏览/下载:7/0  |  提交时间:2021/03/17
Working across space and time: nonstationarity in ecological research and application 期刊论文
Frontiers in Ecology and the Environment, 2021
作者:  Christine R Rollinson;  Andrew O Finley;  M Ross Alexander;  Sudipto Banerjee;  Kelly-Ann Dixon Hamil;  Lauren E Koenig;  Dexter Henry Locke;  Megan Peterson;  Morgan W Tingley;  Kathryn Wheeler;  Casey Youngflesh;  Elise F Zipkin
收藏  |  浏览/下载:8/0  |  提交时间:2021/02/17
A mycobacterial ABC transporter mediates the uptake of hydrophilic compounds 期刊论文
NATURE, 2020, 580 (7803) : 409-+
作者:  Al-Shayeb, Basem;  Sachdeva, Rohan;  Chen, Lin-Xing;  Ward, Fred;  Munk, Patrick;  Devoto, Audra;  Castelle, Cindy J.;  Olm, Matthew R.;  Bouma-Gregson, Keith;  Amano, Yuki;  He, Christine;  Meheust, Raphael;  Brooks, Brandon;  Thomas, Alex;  Levy, Adi;  Matheus-Carnevali, Paula;  Sun, Christine;  Goltsman, Daniela S. A.;  Borton, Mikayla A.;  Sharrar, Allison;  Jaffe, Alexander L.;  Nelson, Tara C.;  Kantor, Rose;  Keren, Ray;  Lane, Katherine R.;  Farag, Ibrahim F.;  Lei, Shufei;  Finstad, Kari;  Amundson, Ronald;  Anantharaman, Karthik;  Zhou, Jinglie;  Probst, Alexander J.;  Power, Mary E.;  Tringe, Susannah G.;  Li, Wen-Jun;  Wrighton, Kelly;  Harrison, Sue;  Morowitz, Michael;  Relman, David A.;  Doudna, Jennifer A.;  Lehours, Anne-Catherine;  Warren, Lesley;  Cate, Jamie H. D.;  Santini, Joanne M.;  Banfield, Jillian F.
收藏  |  浏览/下载:34/0  |  提交时间:2020/07/03

Mycobacterium tuberculosis (Mtb) is an obligate human pathogen and the causative agent of tuberculosis(1-3). Although Mtb can synthesize vitamin B-12 (cobalamin) de novo, uptake of cobalamin has been linked to pathogenesis of tuberculosis2. Mtb does not encode any characterized cobalamin transporter(4-6)  however, the gene rv1819c was found to be essential for uptake of cobalamin(1). This result is difficult to reconcile with the original annotation of Rv1819c as a protein implicated in the transport of antimicrobial peptides such as bleomycin(7). In addition, uptake of cobalamin seems inconsistent with the amino acid sequence, which suggests that Rv1819c has a bacterial ATP-binding cassette (ABC)-exporter fold1. Here, we present structures of Rv1819c, which reveal that the protein indeed contains the ABC-exporter fold, as well as a large water-filled cavity of about 7,700 angstrom(3), which enables the protein to transport the unrelated hydrophilic compounds bleomycin and cobalamin. On the basis of these structures, we propose that Rv1819c is a multi-solute transporter for hydrophilic molecules, analogous to the multidrug exporters of the ABC transporter family, which pump out structurally diverse hydrophobic compounds from cells(8-11).


  
Prenatal Particulate Air Pollution and DNA Methylation in Newborns: An Epigenome-Wide Meta-Analysis 期刊论文
ENVIRONMENTAL HEALTH PERSPECTIVES, 2019, 127 (5)
作者:  Gruzieva, Olena;  Xu, Cheng-Jian;  Yousefi, Paul;  Relton, Caroline;  Merid, Simon Kebede;  Breton, Carrie V.;  Gao, Lu;  Volk, Heather E.;  Feinberg, Jason I.;  Ladd-Acosta, Christine;  Bakulski, Kelly;  Auffray, Charles;  Lemonnier, Nathanael;  Plusquin, Michelle;  Ghantous, Akram;  Herceg, Zdenko;  Nawrot, Tim S.;  Pizzi, Costanza;  Richiardi, Lorenzo;  Rusconi, Franca;  Vineis, Paolo;  Kogevinas, Manolis;  Felix, Janine F.;  Duijts, Liesbeth;  den Dekker, Herman T.;  Jaddoe, Vincent W. V.;  Ruiz, Jose L.;  Bustamante, Mariona;  Anto, Josep Maria;  Sunyer, Jordi;  Vrijheid, Martine;  Gutzkow, Kristine B.;  Grazuleviciene, Regina;  Hernandez-Ferrer, Carles;  Annesi-Maesano, Isabella;  Lepeule, Johanna;  Bousquet, Jean;  Bergstrom, Anna;  Kull, Inger;  Soderhall, Cilla;  Kere, Juha;  Gehring, Ulrike;  Brunekreef, Bert;  Just, Allan C.;  Wright, Rosalind J.;  Peng, Cheng;  Gold, Diane R.;  Kloog, Itai;  DeMeo, Dawn L.;  Pershagen, Goran;  Koppelman, Gerard H.;  London, Stephanie J.;  Baccarelli, Andrea A.;  Melen, Erik
收藏  |  浏览/下载:16/0  |  提交时间:2019/11/26
Cross-tissue integration of genetic and epigenetic data offers insight into autism spectrum disorder 期刊论文
NATURE COMMUNICATIONS, 2017, 8
作者:  Andrews, Shan V.;  Ellis, Shannon E.;  Bakulski, Kelly M.;  Sheppard, Brooke;  Croen, Lisa A.;  Hertz-Picciotto, Irva;  Newschaffer, Craig J.;  Feinberg, Andrew P.;  Arking, Dan E.;  Ladd-Acosta, Christine;  Fallin, M. Daniele
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27