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Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms 期刊论文
Science, 2020
作者:  David E. Gordon;  Joseph Hiatt;  Mehdi Bouhaddou;  Veronica V. Rezelj;  Svenja Ulferts;  Hannes Braberg;  Alexander S. Jureka;  Kirsten Obernier;  Jeffrey Z. Guo;  Jyoti Batra;  Robyn M. Kaake;  Andrew R. Weckstein;  Tristan W. Owens;  Meghna Gupta;  Sergei Pourmal;  Erron W. Titus;  Merve Cakir;  Margaret Soucheray;  Michael McGregor;  Zeynep Cakir;  Gwendolyn Jang;  Matthew J. O’Meara;  Tia A. Tummino;  Ziyang Zhang;  Helene Foussard;  Ajda Rojc;  Yuan Zhou;  Dmitry Kuchenov;  Ruth Hüttenhain;  Jiewei Xu;  Manon Eckhardt;  Danielle L. Swaney;  Jacqueline M. Fabius;  Manisha Ummadi;  Beril Tutuncuoglu;  Ujjwal Rathore;  Maya Modak;  Paige Haas;  Kelsey M. Haas;  Zun Zar Chi Naing;  Ernst H. Pulido;  Ying Shi;  Inigo Barrio-Hernandez;  Danish Memon;  Eirini Petsalaki;  Alistair Dunham;  Miguel Correa Marrero;  David Burke;  Cassandra Koh;  Thomas Vallet;  Jesus A. Silvas;  Caleigh M. Azumaya;  Christian Billesbølle;  Axel F. Brilot;  Melody G. Campbell;  Amy Diallo;  Miles Sasha Dickinson;  Devan Diwanji;  Nadia Herrera;  Nick Hoppe;  Huong T. Kratochvil;  Yanxin Liu;  Gregory E. Merz;  Michelle Moritz;  Henry C. Nguyen;  Carlos Nowotny;  Cristina Puchades;  Alexandrea N. Rizo;  Ursula Schulze-Gahmen;  Amber M. Smith;  Ming Sun;  Iris D. Young;  Jianhua Zhao;  Daniel Asarnow;  Justin Biel;  Alisa Bowen;  Julian R. Braxton;  Jen Chen;  Cynthia M. Chio;  Un Seng Chio;  Ishan Deshpande;  Loan Doan;  Bryan Faust;  Sebastian Flores;  Mingliang Jin;  Kate Kim;  Victor L. Lam;  Fei Li;  Junrui Li;  Yen-Li Li;  Yang Li;  Xi Liu;  Megan Lo;  Kyle E. Lopez;  Arthur A. Melo;  Frank R. Moss;  Phuong Nguyen;  Joana Paulino;  Komal Ishwar Pawar;  Jessica K. Peters;  Thomas H. Pospiech;  Maliheh Safari;  Smriti Sangwan;  Kaitlin Schaefer;  Paul V. Thomas;  Aye C. Thwin;  Raphael Trenker;  Eric Tse;  Tsz Kin Martin Tsui;  Feng Wang;  Natalie Whitis;  Zanlin Yu;  Kaihua Zhang;  Yang Zhang;  Fengbo Zhou;  Daniel Saltzberg;  QCRG Structural Biology Consortium12†;  Anthony J. Hodder;  Amber S. Shun-Shion;  Daniel M. Williams;  Kris M. White;  Romel Rosales;  Thomas Kehrer;  Lisa Miorin;  Elena Moreno;  Arvind H. Patel;  Suzannah Rihn;  Mir M. Khalid;  Albert Vallejo-Gracia;  Parinaz Fozouni;  Camille R. Simoneau;  Theodore L. Roth;  David Wu;  Mohd Anisul Karim;  Maya Ghoussaini;  Ian Dunham;  Francesco Berardi;  Sebastian Weigang;  Maxime Chazal;  Jisoo Park;  James Logue;  Marisa McGrath;  Stuart Weston;  Robert Haupt;  C. James Hastie;  Matthew Elliott;  Fiona Brown;  Kerry A. Burness;  Elaine Reid;  Mark Dorward;  Clare Johnson;  Stuart G. Wilkinson;  Anna Geyer;  Daniel M. Giesel;  Carla Baillie;  Samantha Raggett;  Hannah Leech;  Rachel Toth;  Nicola Goodman;  Kathleen C. Keough;  Abigail L. Lind;  Zoonomia Consortium‡;  Reyna J. Klesh;  Kafi R. Hemphill;  Jared Carlson-Stevermer;  Jennifer Oki;  Kevin Holden;  Travis Maures;  Katherine S. Pollard;  Andrej Sali;  David A. Agard;  Yifan Cheng;  James S. Fraser;  Adam Frost;  Natalia Jura;  Tanja Kortemme;  Aashish Manglik;  Daniel R. Southworth;  Robert M. Stroud;  Dario R. Alessi;  Paul Davies;  Matthew B. Frieman;  Trey Ideker;  Carmen Abate;  Nolwenn Jouvenet;  Georg Kochs;  Brian Shoichet;  Melanie Ott;  Massimo Palmarini;  Kevan M. Shokat;  Adolfo García-Sastre;  Jeremy A. Rassen;  Robert Grosse;  Oren S. Rosenberg;  Kliment A. Verba;  Christopher F. Basler;  Marco Vignuzzi;  Andrew A. Peden;  Pedro Beltrao;  Nevan J. Krogan
收藏  |  浏览/下载:27/0  |  提交时间:2020/12/07
In vivo Perturb-Seq reveals neuronal and glial abnormalities associated with autism risk genes 期刊论文
Science, 2020
作者:  Xin Jin;  Sean K. Simmons;  Amy Guo;  Ashwin S. Shetty;  Michelle Ko;  Lan Nguyen;  Vahbiz Jokhi;  Elise Robinson;  Paul Oyler;  Nathan Curry;  Giulio Deangeli;  Simona Lodato;  Joshua Z. Levin;  Aviv Regev;  Feng Zhang;  Paola Arlotta
收藏  |  浏览/下载:9/0  |  提交时间:2020/11/30
A marine microbiome antifungal targets urgent-threat drug-resistant fungi 期刊论文
Science, 2020
作者:  Fan Zhang;  Miao Zhao;  Doug R. Braun;  Spencer S. Ericksen;  Jeff S. Piotrowski;  Justin Nelson;  Jian Peng;  Gene E. Ananiev;  Shaurya Chanana;  Kenneth Barns;  Jen Fossen;  Hiram Sanchez;  Marc G. Chevrette;  Ilia A. Guzei;  Changgui Zhao;  Le Guo;  Weiping Tang;  Cameron R. Currie;  Scott R. Rajski;  Anjon Audhya;  David R. Andes;  Tim S. Bugni
收藏  |  浏览/下载:14/0  |  提交时间:2020/11/24
A highly efficient triboelectric negative air ion generator 期刊论文
Nature, 2020
作者:  Hengyu Guo;  Jie Chen;  Longfei Wang;  Aurelia Chi Wang;  Yafeng Li;  Chunhua An;  Jr-Hau He;  Chenguo Hu;  Vincent K. S. Hsiao;  Zhong Lin Wang
收藏  |  浏览/下载:9/0  |  提交时间:2020/11/09
Partitioning of cancer therapeutics in nuclear condensates 期刊论文
Science, 2020
作者:  Isaac A. Klein;  Ann Boija;  Lena K. Afeyan;  Susana Wilson Hawken;  Mengyang Fan;  Alessandra Dall'Agnese;  Ozgur Oksuz;  Jonathan E. Henninger;  Krishna Shrinivas;  Benjamin R. Sabari;  Ido Sagi;  Victoria E. Clark;  Jesse M. Platt;  Mrityunjoy Kar;  Patrick M. McCall;  Alicia V. Zamudio;  John C. Manteiga;  Eliot L. Coffey;  Charles H. Li;  Nancy M. Hannett;  Yang Eric Guo;  Tim-Michael Decker;  Tong Ihn Lee;  Tinghu Zhang;  Jing-Ke Weng;  Dylan J. Taatjes;  Arup Chakraborty;  Phillip A. Sharp;  Young Tae Chang;  Anthony A. Hyman;  Nathanael S. Gray;  Richard A. Young
收藏  |  浏览/下载:18/0  |  提交时间:2020/06/22
Synthesis and properties of free-standing monolayer amorphous carbon 期刊论文
NATURE, 2020, 577 (7789) : 199-+
作者:  Toh, Chee-Tat;  Zhang, Hongji;  Lin, Junhao;  Mayorov, Alexander S.;  Wang, Yun-Peng;  Orofeo, Carlo M.;  Ferry, Darim Badur;  Andersen, Henrik;  Kakenov, Nurbek;  Guo, Zenglong;  Abidi, Irfan Haider;  Sims, Hunter;  Suenaga, Kazu;  Pantelides, Sokrates T.;  Ozyilmaz, Barbaros
收藏  |  浏览/下载:7/0  |  提交时间:2020/07/03

Bulk amorphous materials have been studied extensively and are widely used, yet their atomic arrangement remains an open issue. Although they are generally believed to be Zachariasen continuous random networks(1), recent experimental evidence favours the competing crystallite model in the case of amorphous silicon(2-4). In two-dimensional materials, however, the corresponding questions remain unanswered. Here we report the synthesis, by laser-assisted chemical vapour deposition(5), of centimetre-scale, free-standing, continuous and stable monolayer amorphous carbon, topologically distinct from disordered graphene. Unlike in bulk materials, the structure of monolayer amorphous carbon can be determined by atomic-resolution imaging. Extensive characterization by Raman and X-ray spectroscopy and transmission electron microscopy reveals the complete absence of long-range periodicity and a threefold-coordinated structure with a wide distribution of bond lengths, bond angles, and five-, six-, seven- and eight-member rings. The ring distribution is not a Zachariasen continuous random network, but resembles the competing (nano)crystallite model(6). We construct a corresponding model that enables density-functional-theory calculations of the properties of monolayer amorphous carbon, in accordance with observations. Direct measurements confirm that it is insulating, with resistivity values similar to those of boron nitride grown by chemical vapour deposition. Free-standing monolayer amorphous carbon is surprisingly stable and deforms to a high breaking strength, without crack propagation from the point of fracture. The excellent physical properties of this stable, free-standing monolayer amorphous carbon could prove useful for permeation and diffusion barriers in applications such as magnetic recording devices and flexible electronics.


  
Horizontal gene transfer of Fhb7 from fungus underlies Fusarium head blight resistance in wheat 期刊论文
Science, 2020
作者:  Hongwei Wang;  Silong Sun;  Wenyang Ge;  Lanfei Zhao;  Bingqian Hou;  Kai Wang;  Zhongfan Lyu;  Liyang Chen;  Shoushen Xu;  Jun Guo;  Min Li;  Peisen Su;  Xuefeng Li;  Guiping Wang;  Cunyao Bo;  Xiaojian Fang;  Wenwen Zhuang;  Xinxin Cheng;  Jianwen Wu;  Luhao Dong;  Wuying Chen;  Wen Li;  Guilian Xiao;  Jinxiao Zhao;  Yongchao Hao;  Ying Xu;  Yu Gao;  Wenjing Liu;  Yanhe Liu;  Huayan Yin;  Jiazhu Li;  Xiang Li;  Yan Zhao;  Xiaoqian Wang;  Fei Ni;  Xin Ma;  Anfei Li;  Steven S. Xu;  Guihua Bai;  Eviatar Nevo;  Caixia Gao;  Herbert Ohm;  Lingrang Kong
收藏  |  浏览/下载:17/0  |  提交时间:2020/05/25
Leaf size of woody dicots predicts ecosystem primary productivity 期刊论文
ECOLOGY LETTERS, 2020, 23 (6) : 1003-1013
作者:  Li, Yaoqi;  Reich, Peter B.;  Schmid, Bernhard;  Shrestha, Nawal;  Feng, Xiao;  Lyu, Tong;  Maitner, Brian S.;  Xu, Xiaoting;  Li, Yichao;  Zou, Dongting;  Tan, Zheng-Hong;  Su, Xiangyan;  Tang, Zhiyao;  Guo, Qinghua;  Feng, Xiaojuan;  Enquist, Brian J.;  Wang, Zhiheng
收藏  |  浏览/下载:13/0  |  提交时间:2020/05/13
Annual evapotranspiration  China  community mean leaf size  large-scale eco-evolutionary patterns  leaf area index  North America  palaeo-primary productivity  plant functional traits  
The stepwise assembly of the neonatal virome is modulated by breastfeeding 期刊论文
NATURE, 2020
作者:  Medina, Christopher B.;  Mehrotra, Parul;  Arandjelovic, Sanja;  Perrys, Justin S. A.;  Guo, Yizhan;  Morioka, Sho;  Barron, Brady;  Walk, Scott F.;  Ghesquiere, Bart;  Lorenz, Ulrike;  Krupnick, Alexander S.;  Ravichandran, Kodi S.
收藏  |  浏览/下载:36/0  |  提交时间:2020/07/03

The infant gut is colonized first by temperate bacteriophages induced from pioneer bacteria and later by viruses that replicate in human cells, the populations of which are modulated by breastfeeding.


The gut of healthy human neonates is usually devoid of viruses at birth, but quickly becomes colonized, which-in some cases-leads to gastrointestinal disorders(1-4). Here we show that the assembly of the viral community in neonates takes place in distinct steps. Fluorescent staining of virus-like particles purified from infant meconium or early stool samples shows few or no particles, but by one month of life particle numbers increase to 10(9) per gram, and these numbers seem to persist throughout life(5-7). We investigated the origin of these viral populations using shotgun metagenomic sequencing of virus-enriched preparations and whole microbial communities, followed by targeted microbiological analyses. Results indicate that, early after birth, pioneer bacteria colonize the infant gut and by one month prophages induced from these bacteria provide the predominant population of virus-like particles. By four months of life, identifiable viruses that replicate in human cells become more prominent. Multiple human viruses were more abundant in stool samples from babies who were exclusively fed on formula milk compared with those fed partially or fully on breast milk, paralleling reports that breast milk can be protective against viral infections(8-10). Bacteriophage populations also differed depending on whether or not the infant was breastfed. We show that the colonization of the infant gut is stepwise, first mainly by temperate bacteriophages induced from pioneer bacteria, and later by viruses that replicate in human cells  this second phase is modulated by breastfeeding.


  
Modular and tunable biological feedback control using a de novo protein switch (vol 572, pg 265, 2019) 期刊论文
NATURE, 2020, 579 (7798) : E8-E8
作者:  Christodoulou, Constantina;  Spencer, Joel A.;  Yeh, Shu-Chi A.;  Turcotte, Raphael;  Kokkaliaris, Konstantinos D.;  Panero, Riccardo;  Ramos, Azucena;  Guo, Guoji;  Seyedhassantehrani, Negar;  Esipova, Tatiana V.;  Vinogradov, Sergei A.;  Rudzinskas, Sarah;  Zhang, Yi;  Perkins, Archibald S.;  Orkin, Stuart H.;  Calogero, Raffaele A.;  Schroeder, Timm;  Lin, Charles P.;  Camargo, Fernando D.
收藏  |  浏览/下载:16/0  |  提交时间:2020/07/03