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Improving the prediction of an atmospheric chemistry transport model using gradient-boosted regression trees 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (13) : 8063-8082
作者:  Ivatt, Peter D.;  Evans, Mathew J.
收藏  |  浏览/下载:11/0  |  提交时间:2020/07/21
Spatio-temporal variation of reference evapotranspiration in northwest China based on CORDEX-EA 期刊论文
ATMOSPHERIC RESEARCH, 2020, 238
作者:  Yang, Linshan;  Feng, Qi;  Adamowski, Jan F.;  Yin, Zhenliang;  Wen, Xiaohu;  Wu, Min;  Jia, Bing;  Hao, Qiang
收藏  |  浏览/下载:13/0  |  提交时间:2020/08/18
CORDEX-EA  Reference evapotranspiration  Machine learning algorithm  Northwest China  
Linking large-scale circulation patterns to low-cloud properties 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (12) : 7125-7138
作者:  Juliano, Timothy W.;  Lebo, Zachary J.
收藏  |  浏览/下载:9/0  |  提交时间:2020/06/22
Dynamic spatial-temporal precipitation distribution models for short-duration rainstorms in Shenzhen, China based on machine learning 期刊论文
ATMOSPHERIC RESEARCH, 2020, 237
作者:  Liu, Yuan-Yuan;  Li, Lei;  Liu, Ye-Sen;  Chan, Pak Wai;  Zhang, Wen-Hai
收藏  |  浏览/下载:9/0  |  提交时间:2020/07/02
Short-duration rainstorm  Machine learning  Locally linear embedding method  Dynamic spatial-temporal distribution  Shenzhen  
Clonally expanded CD8 T cells patrol the cerebrospinal fluid in Alzheimer's disease 期刊论文
NATURE, 2020, 577 (7790) : 399-+
作者:  Gate, David;  Saligrama, Naresha;  Leventhal, Olivia;  Yang, Andrew C.;  Unger, Michael S.;  Middeldorp, Jinte;  Chen, Kelly;  Lehallier, Benoit;  Channappa, Divya;  De Los Santos, Mark B.;  McBride, Alisha;  Pluvinage, John;  Elahi, Fanny;  Tam, Grace Kyin-Ye;  Kim, Yongha;  Greicius, Michael;  Wagner, Anthony D.;  Aigner, Ludwig;  Galasko, Douglas R.;  Davis, Mark M.;  Wyss-Coray, Tony
收藏  |  浏览/下载:6/0  |  提交时间:2020/07/03

Alzheimer'  s disease is an incurable neurodegenerative disorder in which neuroinflammation has a critical function(1). However, little is known about the contribution of the adaptive immune response in Alzheimer'  s disease(2). Here, using integrated analyses of multiple cohorts, we identify peripheral and central adaptive immune changes in Alzheimer'  s disease. First, we performed mass cytometry of peripheral blood mononuclear cells and discovered an immune signature of Alzheimer'  s disease that consists of increased numbers of CD8(+) T effector memory CD45RA(+) (T-EMRA) cells. In a second cohort, we found that CD8(+) T-EMRA cells were negatively associated with cognition. Furthermore, single-cell RNA sequencing revealed that T cell receptor (TCR) signalling was enhanced in these cells. Notably, by using several strategies of single-cell TCR sequencing in a third cohort, we discovered clonally expanded CD8(+) T-EMRA cells in the cerebrospinal fluid of patients with Alzheimer'  s disease. Finally, we used machine learning, cloning and peptide screens to demonstrate the specificity of clonally expanded TCRs in the cerebrospinal fluid of patients with Alzheimer'  s disease to two separate Epstein-Barr virus antigens. These results reveal an adaptive immune response in the blood and cerebrospinal fluid in Alzheimer'  s disease and provide evidence of clonal, antigen-experienced T cells patrolling the intrathecal space of brains affected by age-related neurodegeneration.


  
Developing a novel hybrid model for the estimation of surface 8 h ozone (O-3) across the remote Tibetan Plateau during 2005-2018 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (10) : 6159-6175
作者:  Li, Rui;  Zhao, Yilong;  Zhou, Wenhui;  Meng, Ya;  Zhang, Ziyu;  Fu, Hongbo
收藏  |  浏览/下载:10/0  |  提交时间:2020/06/01
Ordinal regression algorithms for the analysis of convective situations over Madrid-Barajas airport 期刊论文
ATMOSPHERIC RESEARCH, 2020, 236
作者:  Guijo-Rubio, D.;  Casanova-Mateo, C.;  Sanz-Justo, J.;  Gutierrez, P. A.;  Cornejo-Bueno, S.;  Hervas, C.;  Salcedo-Sanz, S.
收藏  |  浏览/下载:7/0  |  提交时间:2020/07/02
Convective clouds  Convective analysis  Airports  Machine learning techniques  Ordinal regression  
Multi-model ensemble predictions of precipitation and temperature using machine learning algorithms 期刊论文
ATMOSPHERIC RESEARCH, 2020, 236
作者:  Ahmed, Kamal;  Sachindra, D. A.;  Shahid, Shamsuddin;  Iqbal, Zafar;  Nawaz, Nadeem;  Khan, Najeebullah
收藏  |  浏览/下载:16/0  |  提交时间:2020/07/02
General circulation models  Multi-model ensemble  Taylor skill score  Machine learning algorithms  Temperature and precipitation  Pakistan  
Accelerated discovery of CO2 electrocatalysts using active machine learning 期刊论文
NATURE, 2020, 581 (7807) : 178-+
作者:  Lan, Jun;  Ge, Jiwan;  Yu, Jinfang;  Shan, Sisi;  Zhou, Huan;  Fan, Shilong;  Zhang, Qi;  Shi, Xuanling;  Wang, Qisheng;  Zhang, Linqi;  Wang, Xinquan
收藏  |  浏览/下载:88/0  |  提交时间:2020/07/03

The rapid increase in global energy demand and the need to replace carbon dioxide (CO2)-emitting fossil fuels with renewable sources have driven interest in chemical storage of intermittent solar and wind energy(1,2). Particularly attractive is the electrochemical reduction of CO2 to chemical feedstocks, which uses both CO2 and renewable energy(3-8). Copper has been the predominant electrocatalyst for this reaction when aiming for more valuable multi-carbon products(9-16), and process improvements have been particularly notable when targeting ethylene. However, the energy efficiency and productivity (current density) achieved so far still fall below the values required to produce ethylene at cost-competitive prices. Here we describe Cu-Al electrocatalysts, identified using density functional theory calculations in combination with active machine learning, that efficiently reduce CO2 to ethylene with the highest Faradaic efficiency reported so far. This Faradaic efficiency of over 80 per cent (compared to about 66 per cent for pure Cu) is achieved at a current density of 400 milliamperes per square centimetre (at 1.5 volts versus a reversible hydrogen electrode) and a cathodic-side (half-cell) ethylene power conversion efficiency of 55 +/- 2 per cent at 150 milliamperes per square centimetre. We perform computational studies that suggest that the Cu-Al alloys provide multiple sites and surface orientations with near-optimal CO binding for both efficient and selective CO2 reduction(17). Furthermore, in situ X-ray absorption measurements reveal that Cu and Al enable a favourable Cu coordination environment that enhances C-C dimerization. These findings illustrate the value of computation and machine learning in guiding the experimental exploration of multi-metallic systems that go beyond the limitations of conventional single-metal electrocatalysts.


  
The proteome landscape of the kingdoms of life 期刊论文
NATURE, 2020
作者:  Arzi, Anat;  Rozenkrantz, Liron;  Gorodisky, Lior;  Rozenkrantz, Danit;  Holtzman, Yael;  Ravia, Aharon;  Bekinschtein, Tristan A.;  Galperin, Tatyana;  Krimchansky, Ben-Zion;  Cohen, Gal;  Oksamitni, Anna;  Aidinoff, Elena;  Sacher, Yaron;  Sobel, Noam
收藏  |  浏览/下载:13/0  |  提交时间:2020/07/03

Proteins carry out the vast majority of functions in all biological domains, but for technological reasons their large-scale investigation has lagged behind the study of genomes. Since the first essentially complete eukaryotic proteome was reported(1), advances in mass-spectrometry-based proteomics(2)have enabled increasingly comprehensive identification and quantification of the human proteome(3-6). However, there have been few comparisons across species(7,8), in stark contrast with genomics initiatives(9). Here we use an advanced proteomics workflow-in which the peptide separation step is performed by a microstructured and extremely reproducible chromatographic system-for the in-depth study of 100 taxonomically diverse organisms. With two million peptide and 340,000 stringent protein identifications obtained in a standardized manner, we double the number of proteins with solid experimental evidence known to the scientific community. The data also provide a large-scale case study for sequence-based machine learning, as we demonstrate by experimentally confirming the predicted properties of peptides fromBacteroides uniformis. Our results offer a comparative view of the functional organization of organisms across the entire evolutionary range. A remarkably high fraction of the total proteome mass in all kingdoms is dedicated to protein homeostasis and folding, highlighting the biological challenge of maintaining protein structure in all branches of life. Likewise, a universally high fraction is involved in supplying energy resources, although these pathways range from photosynthesis through iron sulfur metabolism to carbohydrate metabolism. Generally, however, proteins and proteomes are remarkably diverse between organisms, and they can readily be explored and functionally compared at www.proteomesoflife.org.