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Airborne bacteria confirm the pristine nature of the Southern Ocean boundary layer 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (24) : 13275-13282
作者:  Uetake, Jun;  Hill, Thomas C. J.;  Moore, Kathryn A.;  DeMott, Paul J.;  Protat, Alain;  Kreidenweis, Sonia M.
收藏  |  浏览/下载:11/0  |  提交时间:2020/06/09
bioaerosol  marine aerosol  Southern Ocean  
High levels of primary biogenic organic aerosols are driven by only a few plant-associated microbial taxa 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (9) : 5609-5628
作者:  Samake, Abdoulaye;  Bonin, Aurelie;  Jaffrezo, Jean-Luc;  Taberlet, Pierre;  Weber, Samuel;  Uzu, Gaelle;  Jacob, Veronique;  Conil, Sebastien;  Martins, Jean M. F.
收藏  |  浏览/下载:12/0  |  提交时间:2020/05/20
A plant genetic network for preventing dysbiosis in the phyllosphere 期刊论文
NATURE, 2020, 580 (7805) : 653-+
作者:  van den Brink, Susanne C.;  Alemany, Anna;  van Batenburg, Vincent;  Moris, Naomi;  Blotenburg, Marloes;  Vivie, Judith;  Baillie-Johnson, Peter;  Nichols, Jennifer;  Sonnen, Katharina F.;  Martinez Arias, Alfonso;  van Oudenaarden, Alexander
收藏  |  浏览/下载:59/0  |  提交时间:2020/07/03

Mutations in genes involved in immune signalling and vesicle trafficking cause defects in the leaf microbiome of Arabidopsis thaliana that result in damage to leaf tissues, suggesting mechanisms by which terrestrial plants control the level and diversity of endophytic phyllosphere microbiota.


The aboveground parts of terrestrial plants, collectively called the phyllosphere, have a key role in the global balance of atmospheric carbon dioxide and oxygen. The phyllosphere represents one of the most abundant habitats for microbiota colonization. Whether and how plants control phyllosphere microbiota to ensure plant health is not well understood. Here we show that the Arabidopsis quadruple mutant (min7 fls2 efr cerk1  hereafter, mfec)(1), simultaneously defective in pattern-triggered immunity and the MIN7 vesicle-trafficking pathway, or a constitutively activated cell death1 (cad1) mutant, carrying a S205F mutation in a membrane-attack-complex/perforin (MACPF)-domain protein, harbour altered endophytic phyllosphere microbiota and display leaf-tissue damage associated with dysbiosis. The Shannon diversity index and the relative abundance of Firmicutes were markedly reduced, whereas Proteobacteria were enriched in the mfec and cad1(S205F) mutants, bearing cross-kingdom resemblance to some aspects of the dysbiosis that occurs in human inflammatory bowel disease. Bacterial community transplantation experiments demonstrated a causal role of a properly assembled leaf bacterial community in phyllosphere health. Pattern-triggered immune signalling, MIN7 and CAD1 are found in major land plant lineages and are probably key components of a genetic network through which terrestrial plants control the level and nurture the diversity of endophytic phyllosphere microbiota for survival and health in a microorganism-rich environment.


  
Statin drugs might boost healthy gut microbes 期刊论文
NATURE, 2020, 581 (7808) : 263-264
作者:  Maxmen, Amy
收藏  |  浏览/下载:12/0  |  提交时间:2020/07/03

Bacterial changes found in people taking cholesterol-lowering medication.


An analysis of faecal samples reveals that obese people who take cholesterol-lowering statin drugs have a '  healthier'  community of gut microorganisms than would be expected. What are the implications of this surprising finding?


  
Using flow cytometry and light-induced fluorescence to characterize the variability and characteristics of bioaerosols in springtime in Metro Atlanta, Georgia 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (3) : 1817-1838
作者:  Negron, Arnaldo;  DeLeon-Rodriguez, Natasha;  Waters, Samantha M.;  Ziemba, Luke D.;  Anderson, Bruce;  Bergin, Michael;  Konstantinidis, Konstantinos T.;  Nenes, Athanasios
收藏  |  浏览/下载:10/0  |  提交时间:2020/07/02
The global impact of bacterial processes on carbon mass 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (3) : 1777-1794
作者:  Ervens, Barbara;  Amato, Pierre
收藏  |  浏览/下载:0/0  |  提交时间:2020/07/02
Bacterial coexistence driven by motility and spatial competition 期刊论文
NATURE, 2020, 578 (7796) : 588-+
作者:  Micke, P.;  Leopold, T.;  King, S. A.;  Benkler, E.;  Spiess, L. J.;  Schmoeger, L.;  Schwarz, M.;  Crespo Lopez-Urrutia, J. R.;  Schmidt, P. O.
收藏  |  浏览/下载:8/0  |  提交时间:2020/07/03

Elucidating elementary mechanisms that underlie bacterial diversity is central to ecology(1,2) and microbiome research(3). Bacteria are known to coexist by metabolic specialization(4), cooperation(5) and cyclic warfare(6-8). Many species are also motile(9), which is studied in terms of mechanism(10,11), benefit(12,13), strategy(14,15), evolution(16,17) and ecology(18,19). Indeed, bacteria often compete for nutrient patches that become available periodically or by random disturbances(2,20,21). However, the role of bacterial motility in coexistence remains unexplored experimentally. Here we show that-for mixed bacterial populations that colonize nutrient patches-either population outcompetes the other when low in relative abundance. This inversion of the competitive hierarchy is caused by active segregation and spatial exclusion within the patch: a small fast-moving population can outcompete a large fast-growing population by impeding its migration into the patch, while a small fast-growing population can outcompete a large fast-moving population by expelling it from the initial contact area. The resulting spatial segregation is lost for weak growth-migration trade-offs and a lack of virgin space, but is robust to population ratio, density and chemotactic ability, and is observed in both laboratory and wild strains. These findings show that motility differences and their trade-offs with growth are sufficient to promote diversity, and suggest previously undescribed roles for motility in niche formation and collective expulsion-containment strategies beyond individual search and survival.


In mixed bacterial populations that colonize nutrient patches, a growth-migration trade-off can lead to spatial exclusion that provides an advantage to populations that become rare, thereby stabilizing the community.


  
Source identification of airborne bacteria in the mountainous area and the urban areas 期刊论文
ATMOSPHERIC RESEARCH, 2020, 231
作者:  Mu, Feifei;  Li, Yanpeng;  Lu, Rui;  Qi, Yuzhen;  Xie, Wenwen;  Bai, Wenyan
收藏  |  浏览/下载:8/0  |  提交时间:2020/07/02
Airborne bacteria  Sources  Mountainous and urban areas  Source tracker  Back trajectories  
A sparse covarying unit that describes healthy and impaired human gut microbiota development 期刊论文
SCIENCE, 2019, 365 (6449) : 140-+
作者:  Raman, Arjun S.;  Gehrig, Jeanette L.;  Venkatesh, Siddarth;  Chang, Hao-Wei;  Hibberd, Matthew C.;  Subramanian, Sathish;  Kang, Gagandeep;  Bessong, Pascal O.;  Lima, Aldo A. M.;  Kosek, Margaret N.;  Petri, William A., Jr.;  Rodionov, Dmitry A.;  Arzamasov, Aleksandr A.;  Leyn, Semen A.;  Osterman, Andrei L.;  Huq, Sayeeda;  Mostafa, Ishita;  Islam, Munirul;  Mahfuz, Mustafa;  Haque, Rashidul;  Ahmed, Tahmeed;  Barratt, Michael J.;  Gordon, Jeffrey I.
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/27
Effects of microbiota-directed foods in gnotobiotic animals and undernourished children 期刊论文
SCIENCE, 2019, 365 (6449) : 139-+
作者:  Gehrig, Jeanette L.;  39;Donnell, David
收藏  |  浏览/下载:4/0  |  提交时间:2019/11/27