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Frequent mutations that converge on the NFKBIZ pathway in ulcerative colitis 期刊论文
NATURE, 2020, 577 (7789) : 260-+
作者:  Kakiuchi, Nobuyuki;  Yoshida, Kenichi;  Uchino, Motoi;  Kihara, Takako;  Akaki, Kotaro;  Inoue, Yoshikage;  Kawada, Kenji;  Nagayama, Satoshi;  Yokoyama, Akira;  Yamamoto, Shuji;  Matsuura, Minoru;  Horimatsu, Takahiro;  Hirano, Tomonori;  Goto, Norihiro;  Takeuchi, Yasuhide;  Ochi, Yotaro;  Shiozawa, Yusuke;  Kogure, Yasunori;  Watatani, Yosaku;  Fujii, Yoichi;  Kim, Soo Ki;  Kon, Ayana;  Kataoka, Keisuke;  Yoshizato, Tetsuichi;  Nakagawa, Masahiro M.;  Yoda, Akinori;  Nanya, Yasuhito;  Makishima, Hideki;  Shiraishi, Yuichi;  Chiba, Kenichi;  Tanaka, Hiroko;  Sanada, Masashi;  Sugihara, Eiji;  Sato, Taka-aki;  Maruyama, Takashi;  Miyoshi, Hiroyuki;  Taketo, Makoto Mark;  Oishi, Jun;  Inagaki, Ryosaku;  Ueda, Yutaka;  Okamoto, Shinya;  Okajima, Hideaki;  Sakai, Yoshiharu;  Sakurai, Takaki;  Haga, Hironori;  Hirota, Seiichi;  Ikeuchi, Hiroki;  Nakase, Hiroshi;  Marusawa, Hiroyuki;  Chiba, Tsutomu;  Takeuchi, Osamu;  Miyano, Satoru;  Seno, Hiroshi;  Ogawa, Seishi
收藏  |  浏览/下载:77/0  |  提交时间:2020/07/03

Chronic inflammation is accompanied by recurring cycles of tissue destruction and repair and is associated with an increased risk of cancer(1-3). However, how such cycles affect the clonal composition of tissues, particularly in terms of cancer development, remains unknown. Here we show that in patients with ulcerative colitis, the inflamed intestine undergoes widespread remodelling by pervasive clones, many of which are positively selected by acquiring mutations that commonly involve the NFKBIZ, TRAF3IP2, ZC3H12A, PIGR and HNRNPF genes and are implicated in the downregulation of IL-17 and other pro-inflammatory signals. Mutational profiles vary substantially between colitis-associated cancer and non-dysplastic tissues in ulcerative colitis, which indicates that there are distinct mechanisms of positive selection in both tissues. In particular, mutations in NFKBIZ are highly prevalent in the epithelium of patients with ulcerative colitis but rarely found in both sporadic and colitis-associated cancer, indicating that NFKBIZ-mutant cells are selected against during colorectal carcinogenesis. In further support of this negative selection, we found that tumour formation was significantly attenuated in Nfkbiz-mutant mice and cell competition was compromised by disruption of NFKBIZ in human colorectal cancer cells. Our results highlight common and discrete mechanisms of clonal selection in inflammatory tissues, which reveal unexpected cancer vulnerabilities that could potentially be exploited for therapeutics in colorectal cancer.


  
AIM2 inflammasome surveillance of DNA damage shapes neurodevelopment 期刊论文
NATURE, 2020, 580 (7805) : 647-+
作者:  Okada, Tatsuaki;  Fukuhara, Tetsuya;  Tanaka, Satoshi;  Taguchi, Makoto;  Arai, Takehiko;  Senshu, Hiroki;  Sakatani, Naoya;  Shimaki, Yuri;  Demura, Hirohide;  Ogawa, Yoshiko;  Suko, Kentaro;  Sekiguchi, Tomohiko;  Kouyama, Toru;  Takita, Jun;  Matsunaga, Tsuneo;  Imamura, Takeshi;  Wada, Takehiko;  Hasegawa, Sunao;  Helbert, Joern;  Mueller, Thomas G.;  Hagermann, Axel;  Biele, Jens;  Grott, Matthias;  Hamm, Maximilian;  Delbo, Marco;  Hirata, Naru;  Hirata, Naoyuki;  Yamamoto, Yukio;  Sugita, Seiji;  Namiki, Noriyuki;  Kitazato, Kohei;  Arakawa, Masahiko;  Tachibana, Shogo;  Ikeda, Hitoshi;  Ishiguro, Masateru;  Wada, Koji;  Honda, Chikatoshi;  Honda, Rie;  Ishihara, Yoshiaki;  Matsumoto, Koji;  Matsuoka, Moe;  Michikami, Tatsuhiro;  Miura, Akira;  Morota, Tomokatsu;  Noda, Hirotomo;  Noguchi, Rina;  Ogawa, Kazunori;  Shirai, Kei;  Tatsumi, Eri;  Yabuta, Hikaru;  Yokota, Yasuhiro;  Yamada, Manabu;  Abe, Masanao;  Hayakawa, Masahiko;  Iwata, Takahiro;  Ozaki, Masanobu;  Yano, Hajime;  Hosoda, Satoshi;  Mori, Osamu;  Sawada, Hirotaka;  Shimada, Takanobu;  Takeuchi, Hiroshi;  Tsukizaki, Ryudo;  Fujii, Atsushi;  Hirose, Chikako;  Kikuchi, Shota;  Mimasu, Yuya;  Ogawa, Naoko;  Ono, Go;  Takahashi, Tadateru;  Takei, Yuto;  Yamaguchi, Tomohiro;  Yoshikawa, Kent;  Terui, Fuyuto;  Saiki, Takanao;  Nakazawa, Satoru;  Yoshikawa, Makoto;  Watanabe, Seiichiro;  Tsuda, Yuichi
收藏  |  浏览/下载:15/0  |  提交时间:2020/07/03

The sensing of DNA damage by the AIM2 inflammasome promotes the death of central nervous system cells and is required for normal brain development.


Neurodevelopment is characterized by rapid rates of neural cell proliferation and differentiation followed by massive cell death in which more than half of all recently generated brain cells are pruned back. Large amounts of DNA damage, cellular debris, and by-products of cellular stress are generated during these neurodevelopmental events, all of which can potentially activate immune signalling. How the immune response to this collateral damage influences brain maturation and function remains unknown. Here we show that the AIM2 inflammasome contributes to normal brain development and that disruption of this immune sensor of genotoxic stress leads to behavioural abnormalities. During infection, activation of the AIM2 inflammasome in response to double-stranded DNA damage triggers the production of cytokines as well as a gasdermin-D-mediated form of cell death known as pyroptosis(1-4). We observe pronounced AIM2 inflammasome activation in neurodevelopment and find that defects in this sensor of DNA damage result in anxiety-related behaviours in mice. Furthermore, we show that the AIM2 inflammasome contributes to central nervous system (CNS) homeostasis specifically through its regulation of gasdermin-D, and not via its involvement in the production of the cytokines IL-1 and/or IL-18. Consistent with a role for this sensor of genomic stress in the purging of genetically compromised CNS cells, we find that defective AIM2 inflammasome signalling results in decreased neural cell death both in response to DNA damage-inducing agents and during neurodevelopment. Moreover, mutations in AIM2 lead to excessive accumulation of DNA damage in neurons as well as an increase in the number of neurons that incorporate into the adult brain. Our findings identify the inflammasome as a crucial player in establishing a properly formed CNS through its role in the removal of genetically compromised cells.


  
Dietary salt promotes cognitive impairment through tau phosphorylation (vol 574, pg 686, 2019) 期刊论文
NATURE, 2020, 578 (7793) : E9-E9
作者:  Kakiuchi, Nobuyuki;  Yoshida, Kenichi;  Uchino, Motoi;  Kihara, Takako;  Akaki, Kotaro;  Inoue, Yoshikage;  Kawada, Kenji;  Nagayama, Satoshi;  Yokoyama, Akira;  Yamamoto, Shuji;  Matsuura, Minoru;  Horimatsu, Takahiro;  Hirano, Tomonori;  Goto, Norihiro;  Takeuchi, Yasuhide;  Ochi, Yotaro;  Shiozawa, Yusuke;  Kogure, Yasunori;  Watatani, Yosaku;  Fujii, Yoichi;  Kim, Soo Ki;  Kon, Ayana;  Kataoka, Keisuke;  Yoshizato, Tetsuichi;  Nakagawa, Masahiro M.;  Yoda, Akinori;  Nanya, Yasuhito;  Makishima, Hideki;  Shiraishi, Yuichi;  Chiba, Kenichi;  Tanaka, Hiroko;  Sanada, Masashi;  Sugihara, Eiji;  Sato, Taka-Aki;  Maruyama, Takashi;  Miyoshi, Hiroyuki;  Taketo, Makoto Mark;  Oishi, Jun;  Inagaki, Ryosaku;  Ueda, Yutaka;  Okamoto, Shinya;  Okajima, Hideaki;  Sakai, Yoshiharu;  Sakurai, Takaki;  Haga, Hironori;  Hirota, Seiichi;  Ikeuchi, Hiroki;  Nakase, Hiroshi;  Marusawa, Hiroyuki;  Chiba, Tsutomu;  Takeuchi, Osamu;  Miyano, Satoru;  Seno, Hiroshi;  Ogawa, Seishi
收藏  |  浏览/下载:21/0  |  提交时间:2020/07/03
Regional carbon policies in an interconnected power system: How expanded coverage could exacerbate emission leakage 期刊论文
ENERGY POLICY, 2019, 134
作者:  Viskovic, Verena;  Chen, Yihsu;  Siddiqui, Afzal S.;  Tanaka, Makoto
收藏  |  浏览/下载:6/0  |  提交时间:2020/02/17
Carbon leakage  Regional electricity markets  Bi-level modelling  
The effect of atmospheric nudging on the stratospheric residual circulation in chemistry-climate models 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2019, 19 (17) : 11559-11586
作者:  Chrysanthou, Andreas;  Maycock, Amanda C.;  Chipperfield, Martyn P.;  Dhomse, Sandip;  Garny, Hella;  Kinnison, Douglas;  Akiyoshi, Hideharu;  Deushi, Makoto;  Garcia, Rolando R.;  Joeckel, Patrick;  Kirner, Oliver;  Pitari, Giovanni;  Plummer, David A.;  Revell, Laura;  Rozanov, Eugene;  Stenke, Andrea;  Tanaka, Taichu Y.;  Visioni, Daniele;  Yamashita, Yousuke
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
Constrained sialic acid donors enable selective synthesis of alpha-glycosides 期刊论文
SCIENCE, 2019, 364 (6441) : 677-+
作者:  Komura, Naoko;  Kato, Keiichi;  Udagawa, Taro;  Asano, Sachi;  Tanaka, Hide-Nori;  Imamura, Akihiro;  Ishida, Hideharu;  Kiso, Makoto;  Ando, Hiromune
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
Large-scale tropospheric transport in the Chemistry-Climate Model Initiative (CCMI) simulations 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2018, 18 (10) : 7217-7235
作者:  Orbe, Clara;  Yang, Huang;  Waugh, Darryn W.;  Zeng, Guang;  Morgenstern, Olaf;  Kinnison, Douglas E.;  Lamarque, Jean-Francois;  Tilmes, Simone;  Plummer, David A.;  Scinocca, John F.;  Josse, Beatrice;  Marecal, Virginie;  Joeckel, Patrick;  Oman, Luke D.;  Strahan, Susan E.;  Deushi, Makoto;  Tanaka, Taichu Y.;  Yoshida, Kohei;  Akiyoshi, Hideharu;  Yamashita, Yousuke;  Stenke, Andreas;  Revell, Laura;  Sukhodolov, Timofei;  Rozanov, Eugene;  Pitari, Giovanni;  Visioni, Daniele;  Stone, Kane A.;  Schofield, Robyn;  Banerjee, Antara
收藏  |  浏览/下载:10/0  |  提交时间:2019/04/09
Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL 期刊论文
NATURE, 2017, 543 (7643) : 131-+
作者:  Suga, Michihiro;  Akita, Fusamichi;  Sugahara, Michihiro;  Kubo, Minoru;  Nakajima, Yoshiki;  Nakane, Takanori;  Yamashita, Keitaro;  Umena, Yasufumi;  Nakabayashi, Makoto;  Yamane, Takahiro;  Nakano, Takamitsu;  Suzuki, Mamoru;  Masuda, Tetsuya;  Inoue, Shigeyuki;  Kimura, Tetsunari;  Nomura, Takashi;  Yonekura, Shinichiro;  Yu, Long-Jiang;  Sakamoto, Tomohiro;  Motomura, Taiki;  Chen, Jing-Hua;  Kato, Yuki;  Noguchi, Takumi;  Tono, Kensuke;  Joti, Yasumasa;  Kameshima, Takashi;  Hatsui, Takaki;  Nango, Eriko;  Tanaka, Rie;  Naitow, Hisashi;  Matsuura, Yoshinori;  Yamashita, Ayumi;  Yamamoto, Masaki;  Nureki, Osamu;  Yabashi, Makina;  Ishikawa, Tetsuya;  Iwata, So;  Shen, Jian-Ren
收藏  |  浏览/下载:8/0  |  提交时间:2019/04/09
Lidar detection of high concentrations of ozone and aerosol transported from northeastern Asia over Saga, Japan 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2017, 17 (3)
作者:  Uchino, Osamu;  Sakai, Tetsu;  Izumi, Toshiharu;  Nagai, Tomohiro;  Morino, Isamu;  Yamazaki, Akihiro;  Deushi, Makoto;  Yumimoto, Keiya;  Maki, Takashi;  Tanaka, Taichu Y.;  Akaho, Taiga;  Okumura, Hiroshi;  Arai, Kohei;  Nakatsuru, Takahiro;  Matsunaga, Tsuneo;  Yokota, Tatsuya
收藏  |  浏览/下载:6/0  |  提交时间:2019/04/09