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Global maps of soil temperature 期刊论文
Global Change Biology, 2022
作者:  Jonas J. Lembrechts;  Johan van den Hoogen;  Juha Aalto;  Michael B. Ashcroft;  Pieter De Frenne;  Julia Kemppinen;  Martin Kopecký;  Miska Luoto;  Ilya M. D. Maclean;  Thomas W. Crowther;  Joseph J. Bailey;  Stef Haesen;  David H. Klinges;  Pekka Niittynen;  Brett R. Scheffers;  Koenraad Van Meerbeek;  Peter Aartsma;  Otar Abdalaze;  Mehdi Abedi;  Rien Aerts;  Negar Ahmadian;  Antje Ahrends;  Juha M. Alatalo;  Jake M. Alexander;  Camille Nina Allonsius;  Jan Altman;  Christof Ammann;  Christian Andres;  Christopher Andrews;  Jonas Ardö;  Nicola Arriga;  Alberto Arzac;  Valeria Aschero;  Rafael L. Assis;  Jakob Johann Assmann;  Maaike Y. Bader;  Khadijeh Bahalkeh;  Peter Baranč;  ok;  Isabel C. Barrio;  Agustina Barros;  Matti Barthel;  Edmund W. Basham;  Marijn Bauters;  Manuele Bazzichetto;  Luca Belelli Marchesini;  Michael C. Bell;  Juan C. Benavides;  José;  Luis Benito Alonso;  Bernd J. Berauer;  Jarle W. Bjerke;  Robert G. Bjö;  rk;  Mats P. Bjö;  rkman;  Katrin Bjö;  rnsdó;  ttir;  Benjamin Blonder;  Pascal Boeckx;  Julia Boike;  Stef Bokhorst;  ;  rbara N. S. Brum;  Josef Brů;  na;  Nina Buchmann;  Pauline Buysse;  José;  Luí;  s Camargo;  Otá;  vio C. Campoe;  Onur Candan;  Rafaella Canessa;  Nicoletta Cannone;  Michele Carbognani;  Jofre Carnicer;  Angé;  lica Casanova-Katny;  Simone Cesarz;  Bogdan Chojnicki;  Philippe Choler;  Steven L. Chown;  Edgar F. Cifuentes;  Marek Č;  iliak;  Tamara Contador;  Peter Convey;  Elisabeth J. Cooper;  Edoardo Cremonese;  Salvatore R. Curasi;  Robin Curtis;  Maurizio Cutini;  C. Johan Dahlberg;  Gergana N. Daskalova;  Miguel Angel de Pablo;  Stefano Della Chiesa;  ;  rgen Dengler;  Bart Deronde;  Patrice Descombes;  Valter Di Cecco;  Michele Di Musciano;  Jan Dick;  Romina D. Dimarco;  Jiri Dolezal;  Ellen Dorrepaal;  Jiř;  í;  Duš;  ek;  Nico Eisenhauer;  Lars Eklundh;  Todd E. Erickson;  Brigitta Erschbamer;  Werner Eugster;  Robert M. Ewers;  Dan A. Exton;  Nicolas Fanin;  Fatih Fazlioglu;  Iris Feigenwinter;  Giuseppe Fenu;  Olga Ferlian;  M. Rosa Ferná;  ndez Calzado;  Eduardo Ferná;  ndez-Pascual;  Manfred Finckh;  Rebecca Finger Higgens;  T'ai G. W. Forte;  Erika C. Freeman;  Esther R. Frei;  Eduardo Fuentes-Lillo;  Rafael A. Garcí;  a;  Marí;  a B. Garcí;  a;  Charly Gé;  ron;  Mana Gharun;  Dany Ghosn;  Khatuna Gigauri;  Anne Gobin;  Ignacio Goded;  Mathias Goeckede;  Felix Gottschall;  Keith Goulding;  Sanne Govaert;  Bente Jessen Graae;  Sarah Greenwood;  Caroline Greiser;  Achim Grelle;  Benoit Gué;  nard;  Mauro Guglielmin;  Joannè;  s Guillemot;  Peter Haase;  Sylvia Haider;  Aud H. Halbritter;  Maroof Hamid;  Albin Hammerle;  Arndt Hampe;  Siri V. Haugum;  Lucia Hederová;  Bernard Heinesch;  Carole Helfter;  Daniel Hepenstrick;  Maximiliane Herberich;  Mathias Herbst;  Luise Hermanutz;  David S. Hik;  Raú;  l Hoffré;  n;  ;  rgen Homeier;  Lukas Hö;  rtnagl;  Toke T. Hø;  ye;  Filip Hrbacek;  Kristoffer Hylander;  Hiroki Iwata;  Marcin Antoni Jackowicz-Korczynski;  Hervé;  Jactel;  ;  rvi Jä;  rveoja;  Szymon Jastrzę;  bowski;  Anke Jentsch;  Juan J. Jimé;  nez;  Ingibjö;  rg S. Jó;  nsdó;  ttir;  Tommaso Jucker;  Alistair S. Jump;  Radoslaw Juszczak;  ;  bert Kanka;  ;  t Kaš;  par;  George Kazakis;  Julia Kelly;  Anzar A. Khuroo;  Leif Klemedtsson;  Marcin Klisz;  Natascha Kljun;  Alexander Knohl;  Johannes Kobler;  Jozef Kollá;  r;  Martyna M. Kotowska;  Bence Ková;  cs;  Juergen Kreyling;  Andrea Lamprecht;  Simone I. Lang;  Christian Larson;  Keith Larson;  Kamil Laska;  Guerric le Maire;  Rachel I. Leihy;  Luc Lens;  Bengt Liljebladh;  Annalea Lohila;  Juan Lorite;  Benjamin Loubet;  Joshua Lynn;  Martin Macek;  Roy Mackenzie;  Enzo Magliulo;  Regine Maier;  Francesco Malfasi;  Františ;  ek Má;  liš;  Matě;  j Man;  Giovanni Manca;  Antonio Manco;  Tanguy Manise;  Paraskevi Manolaki;  Felipe Marciniak;  Radim Matula;  Ana Clara Mazzolari;  Sergiy Medinets;  Volodymyr Medinets;  Camille Meeussen;  Sonia Merinero;  Rita de Cá;  ssia Guimarã;  es Mesquita;  Katrin Meusburger;  Filip J. R. Meysman;  Sean T. Michaletz;  Ann Milbau;  Dmitry Moiseev;  Pavel Moiseev;  Andrea Mondoni;  Ruth Monfries;  Leonardo Montagnani;  Mikel Moriana-Armendariz;  Umberto Morra di Cella;  Martin Mö;  rsdorf;  Jonathan R. Mosedale;  Lena Muffler;  Miriam Muñ;  oz-Rojas;  Jonathan A. Myers;  Isla H. Myers-Smith;  Laszlo Nagy;  Marianna Nardino;  Ilona Naujokaitis-Lewis;  Emily Newling;  Lena Nicklas;  Georg Niedrist;  Armin Niessner;  Mats B. Nilsson;  Signe Normand;  Marcelo D. Nosetto;  Yann Nouvellon;  Martin A. Nuñ;  ez;  Romà;  Ogaya;  ;  ;  me Ogé;  e;  Joseph Okello;  Janusz Olejnik;  ;  rgen Eivind Olesen;  Ø;  ystein H. Opedal;  Simone Orsenigo;  Andrej Palaj;  Timo Pampuch;  Alexey V. Panov;  Meelis Pä;  rtel;  Ada Pastor;  Aní;  bal Pauchard;  Harald Pauli;  Marian Pavelka;  William D. Pearse;  Matthias Peichl;  Loï;  c Pellissier;  Rachel M. Penczykowski;  Josep Penuelas;  Matteo Petit Bon;  Alessandro Petraglia;  Shyam S. Phartyal;  Gareth K. Phoenix;  Casimiro Pio;  Andrea Pitacco;  Camille Pitteloud;  Roman Plichta;  Francesco Porro;  Miguel Portillo-Estrada;  ;  ;  me Poulenard;  Rafael Poyatos;  Anatoly S. Prokushkin;  Radoslaw Puchalka;  Mihai Puș;  caș;  Dajana Radujković;  Krystal Randall;  Amanda Ratier Backes;  Sabine Remmele;  Wolfram Remmers;  David Renault;  Anita C. Risch;  Christian Rixen;  Sharon A. Robinson;  Bjorn J. M. Robroek;  Adrian V. Rocha;  Christian Rossi;  Graziano Rossi;  Olivier Roupsard;  Alexey V. Rubtsov;  Patrick Saccone;  Clotilde Sagot;  Jhonatan Sallo Bravo;  Cinthya C. Santos;  Judith M. Sarneel;  Tobias Scharnweber;  Jonas Schmeddes;  Marius Schmidt;  Thomas Scholten;  Max Schuchardt;  Naomi Schwartz;  Tony Scott;  Julia Seeber;  Ana Cristina Segalin de Andrade;  Tim Seipel;  Philipp Semenchuk;  Rebecca A. Senior;  Josep M. Serra-Diaz;  Piotr Sewerniak;  Ankit Shekhar;  Nikita V. Sidenko;  Lukas Siebicke;  Laura Siegwart Collier;  Elizabeth Simpson;  David P. Siqueira;  Zuzana Sitková;  Johan Six;  Marko Smiljanic;  Stuart W. Smith;  Sarah Smith-Tripp;  Ben Somers;  Mia Vedel Sø;  rensen;  José;  Joã;  o L. L. Souza;  Bartolomeu Israel Souza;  Arildo Souza Dias;  Marko J. Spasojevic;  James D. M. Speed;  Fabien Spicher;  Angela Stanisci;  Klaus Steinbauer;  Rainer Steinbrecher;  Michael Steinwandter;  Michael Stemkovski;  ;  rg G. Stephan;  Christian Stiegler;  Stefan Stoll;  Martin Svá;  tek;  Miroslav Svoboda;  Torbern Tagesson;  Andrew J. Tanentzap;  Franziska Tanneberger;  Jean-Paul Theurillat;  Haydn J. D. Thomas;  Andrew D. Thomas;  Katja Tielbö;  rger;  Marcello Tomaselli;  Urs Albert Treier;  Mario Trouillier;  Pavel Dan Turtureanu;  Rosamond Tutton;  Vilna A. Tyystjä;  rvi;  Masahito Ueyama;  Karol Ujhá;  zy;  Mariana Ujhá;  zyová;  Domas Uogintas;  Anastasiya V. Urban;  Josef Urban;  Marek Urbaniak;  Tudor-Mihai Ursu;  Francesco Primo Vaccari;  Stijn Van de Vondel;  Liesbeth van den Brink;  Maarten Van Geel;  Vigdis Vandvik;  Pieter Vangansbeke;  Andrej Varlagin;  G. F. Veen;  Elmar Veenendaal;  Susanna E. Venn;  Hans Verbeeck;  Erik Verbrugggen;  Frank G. A. Verheijen;  Luis Villar;  Luca Vitale;  Pascal Vittoz;  Maria Vives-Ingla;  Jonathan von Oppen;  Josefine Walz;  Runxi Wang;  Yifeng Wang;  Robert G. Way;  Ronja E. M. Wedegä;  rtner;  Robert Weigel;  Jan Wild;  Matthew Wilkinson;  Martin Wilmking;  Lisa Wingate;  Manuela Winkler;  Sonja Wipf;  Georg Wohlfahrt;  Georgios Xenakis;  Yan Yang;  Zicheng Yu;  Kailiang Yu;  Florian Zellweger;  Jian Zhang;  Zhaochen Zhang;  Peng Zhao;  Klaudia Ziembliń;  ska;  Reiner Zimmermann;  Shengwei Zong;  Viacheslav I. Zyryanov;  Ivan Nijs;  Jonathan Lenoir
收藏  |  浏览/下载:37/0  |  提交时间:2022/02/23
Climate-smart sustainable agriculture in low-to-intermediate shade agroforests (vol 1, pg 234, 2018) 期刊论文
NATURE SUSTAINABILITY, 2020
作者:  Blaser, W. J.;  Oppong, J.;  Hart, S. P.;  Landolt, J.;  Yeboah, E.;  Six, J.
收藏  |  浏览/下载:32/0  |  提交时间:2020/08/09
Femtosecond-to-millisecond structural changes in a light-driven sodium pump 期刊论文
NATURE, 2020, 583 (7815) : 314-+
作者:  Moore, Luiza;  Leongamornlert, Daniel;  Coorens, Tim H. H.;  Sanders, Mathijs A.;  Ellis, Peter;  Dentro, Stefan C.;  Dawson, Kevin J.;  Butler, Tim;  Rahbari, Raheleh;  Mitchell, Thomas J.;  Maura, Francesco;  Nangalia, Jyoti;  Tarpey, Patrick S.;  Brunner, Simon F.;  Lee-Six, Henry;  Hooks, Yvette;  Moody, Sarah;  Mahbubani, Krishnaa T.;  Jimenez-Linan, Mercedes;  Brosens, Jan J.;  Iacobuzio-Donahue, Christine A.;  Martincorena, Inigo;  Saeb-Parsy, Kourosh;  Campbell, Peter J.;  Stratton, Michael R.
收藏  |  浏览/下载:17/0  |  提交时间:2020/07/03

Light-driven sodium pumps actively transport small cations across cellular membranes(1). These pumps are used by microorganisms to convert light into membrane potential and have become useful optogenetic tools with applications in neuroscience. Although the resting state structures of the prototypical sodium pump Krokinobacter eikastus rhodopsin 2 (KR2) have been solved(2,3), it is unclear how structural alterations overtime allow sodium to be translocated against a concentration gradient. Here, using the Swiss X-ray Free Electron Laser(4), we have collected serial crystallographic data at ten pump-probe delays from femtoseconds to milliseconds. High-resolution structural snapshots throughout the KR2 photocycle show how retinal isomerization is completed on the femtosecond timescale and changes the local structure of the binding pocket in the early nanoseconds. Subsequent rearrangements and deprotonation of the retinal Schiff base open an electrostatic gate in microseconds. Structural and spectroscopic data, in combination with quantum chemical calculations, indicate that a sodium ion bind stransiently close to the retinal within one millisecond. In the last structural intermediate, at 20 milliseconds after activation, we identified a potential second sodium-binding site close to the extracellular exit. These results provide direct molecular insight into the dynamics of active cation transport across biological membranes.


  
Live-animal imaging of native haematopoietic stem and progenitor cells 期刊论文
NATURE, 2020, 578 (7794) : 278-+
作者:  Gerstung, Moritz;  Jolly, Clemency;  Leshchiner, Ignaty;  Dentro, Stefan C.;  Gonzalez, Santiago;  Rosebrock, Daniel;  Mitchell, Thomas J.;  Rubanova, Yulia;  Anur, Pavana;  Yu, Kaixian;  Tarabichi, Maxime;  Deshwar, Amit;  Wintersinger, Jeff;  Kleinheinz, Kortine;  Vazquez-Garcia, Ignacio;  Haase, Kerstin;  Jerman, Lara;  Sengupta, Subhajit;  Macintyre, Geoff;  Malikic, Salem;  Donmez, Nilgun;  Livitz, Dimitri G.;  Cmero, Marek;  Demeulemeester, Jonas;  Schumacher, Steven;  Fan, Yu;  Yao, Xiaotong;  Lee, Juhee;  Schlesner, Matthias;  Boutros, Paul C.;  Bowtell, David D.;  Zhu, Hongtu;  Getz, Gad;  Imielinski, Marcin;  Beroukhim, Rameen;  Sahinalp, S. Cenk;  Ji, Yuan;  Peifer, Martin;  Markowetz, Florian;  Mustonen, Ville;  Yuan, Ke;  Wang, Wenyi;  Morris, Quaid D.;  Spellman, Paul T.;  Wedge, David C.;  Van Loo, Peter;  Deshwar, Amit G.;  Adams, David J.;  Campbell, Peter J.;  Cao, Shaolong;  Christie, Elizabeth L.;  Cun, Yupeng;  Dawson, Kevin J.;  Drews, Ruben M.;  Eils, Roland;  Fittall, Matthew;  Garsed, Dale W.;  Ha, Gavin;  Lee-Six, Henry;  Martincorena, Inigo;  Oesper, Layla;  Peto, Myron;  Raphael, Benjamin J.;  Salcedo, Adriana;  Shi, Ruian;  Shin, Seung Jun;  Spiro, Oliver;  Stein, Lincoln D.;  Vembu, Shankar;  Wheeler, David A.;  Yang, Tsun-Po
收藏  |  浏览/下载:15/0  |  提交时间:2020/07/03

The biology of haematopoietic stem cells (HSCs) has predominantly been studied under transplantation conditions(1,2). It has been particularly challenging to study dynamic HSC behaviour, given that the visualization of HSCs in the native niche in live animals has not, to our knowledge, been achieved. Here we describe a dual genetic strategy in mice that restricts reporter labelling to a subset of the most quiescent long-term HSCs (LT-HSCs) and that is compatible with current intravital imaging approaches in the calvarial bone marrow(3-5). We show that this subset of LT-HSCs resides close to both sinusoidal blood vessels and the endosteal surface. By contrast, multipotent progenitor cells (MPPs) show greater variation in distance from the endosteum and are more likely to be associated with transition zone vessels. LT-HSCs are not found in bone marrow niches with the deepest hypoxia and instead are found in hypoxic environments similar to those of MPPs. In vivo time-lapse imaging revealed that LT-HSCs at steady-state show limited motility. Activated LT-HSCs show heterogeneous responses, with some cells becoming highly motile and a fraction of HSCs expanding clonally within spatially restricted domains. These domains have defined characteristics, as HSC expansion is found almost exclusively in a subset of bone marrow cavities with bone-remodelling activity. By contrast, cavities with low bone-resorbing activity do not harbour expanding HSCs. These findings point to previously unknown heterogeneity within the bone marrow microenvironment, imposed by the stages of bone turnover. Our approach enables the direct visualization of HSC behaviours and dissection of heterogeneity in HSC niches.


A dual genetic strategy enables the labelling and in vivo imaging of native long-term haematopoietic stem cells in the mouse calvarial bone marrow.


  
Two conserved epigenetic regulators prevent healthy ageing 期刊论文
NATURE, 2020
作者:  Yoshida, Kenichi;  Gowers, Kate H. C.;  Lee-Six, Henry;  Chandrasekharan, Deepak P.;  Coorens, Tim;  Maughan, Elizabeth F.;  Beal, Kathryn;  Menzies, Andrew;  Millar, Fraser R.;  Anderson, Elizabeth;  Clarke, Sarah E.;  Pennycuick, Adam;  Thakrar, Ricky M.;  Butler, Colin R.;  Kakiuchi, Nobuyuki;  Hirano, Tomonori;  Hynds, Robert E.;  Stratton, Michael R.;  Martincorena, Inigo;  Janes, Sam M.;  Campbell, Peter J.
收藏  |  浏览/下载:32/0  |  提交时间:2020/07/03

It has long been assumed that lifespan and healthspan correlate strongly, yet the two can be clearly dissociated(1-6). Although there has been a global increase in human life expectancy, increasing longevity is rarely accompanied by an extended healthspan(4,7). Thus, understanding the origin of healthy behaviours in old people remains an important and challenging task. Here we report a conserved epigenetic mechanism underlying healthy ageing. Through genome-wide RNA-interference-based screening of genes that regulate behavioural deterioration in ageing Caenorhabditis elegans, we identify 59 genes as potential modulators of the rate of age-related behavioural deterioration. Among these modulators, we found that a neuronal epigenetic reader, BAZ-2, and a neuronal histone 3 lysine 9 methyltransferase, SET-6, accelerate behavioural deterioration in C. elegans by reducing mitochondrial function, repressing the expression of nuclear-encoded mitochondrial proteins. This mechanism is conserved in cultured mouse neurons and human cells. Examination of human databases(8,9) shows that expression of the human orthologues of these C. elegans regulators, BAZ2B and EHMT1, in the frontal cortex increases with age and correlates positively with the progression of Alzheimer'  s disease. Furthermore, ablation of Baz2b, the mouse orthologue of BAZ-2, attenuates age-dependent body-weight gain and prevents cognitive decline in ageing mice. Thus our genome-wide RNA-interference screen in C. elegans has unravelled conserved epigenetic negative regulators of ageing, suggesting possible ways to achieve healthy ageing.


Two epigenetic regulators-identified in an RNA interference screen in Caenhorhabditis elegans, and conserved in mammals-diminish mitochondrial function and accelerate the age-related deterioration of behaviour.


  
Bark Beetle Population Dynamics in the Anthropocene: Challenges and Solutions 期刊论文
TRENDS IN ECOLOGY & EVOLUTION, 2019, 34 (10) : 914-924
作者:  Biedermann, Peter H. W.;  Mueller, Joerg;  Gregoire, Jean-Claude;  Gruppe, Axel;  Hagge, Jonas;  Hammerbacher, Almuth;  Hofstetter, Richard W.;  Kandasamy, Dineshkumar;  Kolarik, Miroslav;  Kostovcik, Martin;  Krokene, Paal;  Salle, Aurelien;  Six, Diana L.;  Turrini, Tabea;  Vanderpool, Dan;  Wingfield, Michael J.;  Baessler, Claus
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27
Sustainable intensification of agricultural drainage 期刊论文
NATURE SUSTAINABILITY, 2019, 2 (10) : 914-921
作者:  Castellano, Michael J.;  Archontoulis, Sotirios V.;  Helmers, Matthew J.;  Poffenbarger, Hanna J.;  Six, Johan
收藏  |  浏览/下载:5/0  |  提交时间:2020/08/19
Links among warming, carbon and microbial dynamics mediated by soil mineral weathering 期刊论文
NATURE GEOSCIENCE, 2018, 11 (8) : 589-+
作者:  Doetterl, S.;  Berhe, A. A.;  Arnold, C.;  Bode, S.;  Fiener, P.;  Finke, P.;  Fuchslueger, L.;  Griepentrog, M.;  Harden, J. W.;  Nadeu, E.;  Schnecker, J.;  Six, J.;  Trumbore, S.;  Van Oost, K.;  Vogel, C.;  Boeckx, P.
收藏  |  浏览/下载:4/0  |  提交时间:2019/04/09
Climate-smart sustainable agriculture in low-to-intermediate shade agroforests 期刊论文
NATURE SUSTAINABILITY, 2018, 1 (5) : 234-239
作者:  Blaser, W. J.;  Oppong, J.;  Hart, S. P.;  Landolt, J.;  Yeboah, E.;  Six, J.
收藏  |  浏览/下载:7/0  |  提交时间:2020/08/19
Aligning agriculture and climate policy 期刊论文
NATURE CLIMATE CHANGE, 2017, 7 (5)
作者:  Chabbi, A.;  Lehmann, J.;  Ciais, P.;  Loescher, H. W.;  Cotrufo, M. F.;  Don, A.;  SanClements, M.;  Schipper, L.;  Six, J.;  Smith, P.;  Rumpel, C.
收藏  |  浏览/下载:8/0  |  提交时间:2019/04/09