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Origin of complexity in haemoglobin evolution 期刊论文
NATURE, 2020
作者:  Cheema, Suraj S.;  Kwon, Daewoong;  Shanker, Nirmaan;  dos Reis, Roberto;  Hsu, Shang-Lin;  Xiao, Jun;  Zhang, Haigang;  Wagner, Ryan;  Datar, Adhiraj;  McCarter, Margaret R.;  Serrao, Claudy R.;  Yadav, Ajay K.;  Karbasian, Golnaz;  Hsu, Cheng-Hsiang;  Tan, Ava J.;  Wang, Li-Chen;  Thakare, Vishal;  Zhang, Xiang;  Mehta, Apurva;  Karapetrova, Evguenia;  Chopdekar, Rajesh, V;  Shafer, Padraic;  Arenholz, Elke;  Hu, Chenming;  Proksch, Roger;  Ramesh, Ramamoorthy;  Ciston, Jim;  Salahuddin, Sayeef
收藏  |  浏览/下载:50/0  |  提交时间:2020/07/03

Most proteins associate into multimeric complexes with specific architectures(1,2), which often have functional properties such as cooperative ligand binding or allosteric regulation(3). No detailed knowledge is available about how any multimer and its functions arose during evolution. Here we use ancestral protein reconstruction and biophysical assays to elucidate the origins of vertebrate haemoglobin, a heterotetramer of paralogous alpha- and beta-subunits that mediates respiratory oxygen transport and exchange by cooperatively binding oxygen with moderate affinity. We show that modern haemoglobin evolved from an ancient monomer and characterize the historical '  missing link'  through which the modern tetramer evolved-a noncooperative homodimer with high oxygen affinity that existed before the gene duplication that generated distinct alpha- and beta-subunits. Reintroducing just two post-duplication historical substitutions into the ancestral protein is sufficient to cause strong tetramerization by creating favourable contacts with more ancient residues on the opposing subunit. These surface substitutions markedly reduce oxygen affinity and even confer cooperativity, because an ancient linkage between the oxygen binding site and the multimerization interface was already an intrinsic feature of the protein'  s structure. Our findings establish that evolution can produce new complex molecular structures and functions via simple genetic mechanisms that recruit existing biophysical features into higher-level architectures.


Experimental analysis of reconstructed ancestral globins reveals that haemoglobin'  s complex tetrameric structure and oxygen-binding functions evolved by simple genetic and biophysical mechanisms.


  
Ligand-induced monoubiquitination of BIK1 regulates plant immunity 期刊论文
NATURE, 2020, 581 (7807) : 199-+
作者:  Shao, Wei;  Yang, Jiajun;  He, Ming;  Yu, Xiang-Yu;  Lee, Choong Heon;  Yang, Zhaohui;  Joyner, Alexandra L.;  Anderson, Kathryn V.;  Zhang, Jiangyang;  Tsou, Meng-Fu Bryan;  Shi, Hang;  Shi, Song-Hai
收藏  |  浏览/下载:8/0  |  提交时间:2020/07/03

Recognition of microbe-associated molecular patterns (MAMPs) by pattern recognition receptors (PRRs) triggers the first line of inducible defence against invading pathogens(1-3). Receptor-like cytoplasmic kinases (RLCKs) are convergent regulators that associate with multiple PRRs in plants(4). The mechanisms that underlie the activation of RLCKs are unclear. Here we show that when MAMPs are detected, the RLCK BOTRYTIS-INDUCED KINASE 1 (BIK1) is monoubiquitinated following phosphorylation, then released from the flagellin receptor FLAGELLIN SENSING 2 (FLS2)-BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED KINASE 1 (BAK1) complex, and internalized dynamically into endocytic compartments. The Arabidopsis E3 ubiquitin ligases RING-H2 FINGER A3A (RHA3A) and RHA3B mediate the monoubiquitination of BIK1, which is essential for the subsequent release of BIK1 from the FLS2-BAK1 complex and activation of immune signalling. Ligand-induced monoubiquitination and endosomal puncta of BIK1 exhibit spatial and temporal dynamics that are distinct from those of the PRR FLS2. Our study reveals the intertwined regulation of PRR-RLCK complex activation by protein phosphorylation and ubiquitination, and shows that ligand-induced monoubiquitination contributes to the release of BIK1 family RLCKs from the PRR complex and activation of PRR signalling.


  
Stable Casimir equilibria and quantum trapping 期刊论文
SCIENCE, 2019, 364 (6444) : 984-+
作者:  Zhao, Rongkuo;  Li, Lin;  Yang, Sui;  Bao, Wei;  Xia, Yang;  Ashby, Paul;  Wang, Yuan;  Zhang, Xiang
收藏  |  浏览/下载:5/0  |  提交时间:2019/11/27
Pan-cancer genome and transcriptome analyses of 1,699 paediatric leukaemias and solid tumours 期刊论文
NATURE, 2018, 555 (7696) : 371-+
作者:  Ma, Xiaotu;  Liu, Yu;  Liu, Yanling;  Alexandrov, Ludmil B.;  Edmonson, Michael N.;  Gawad, Charles;  Zhou, Xin;  Li, Yongjin;  Rusch, Michael C.;  Easton, John;  Huether, Robert;  Gonzalez-Pena, Veronica;  Wilkinson, Mark R.;  Hermida, Leandro C.;  Davis, Sean;  Sioson, Edgar;  Pounds, Stanley;  Cao, Xueyuan;  Ries, Rhonda E.;  Wang, Zhaoming;  Chen, Xiang;  Dong, Li;  Diskin, Sharon J.;  Smith, Malcolm A.;  Auvil, Jaime M. Guidry;  Meltzer, Paul S.;  Lau, Ching C.;  Perlman, Elizabeth J.;  Maris, John M.;  Meshinchi, Soheil;  Hunger, Stephen P.;  Gerhard, Daniela S.;  Zhang, Jinghui
收藏  |  浏览/下载:15/0  |  提交时间:2019/11/27
Long-term functional maintenance of primary human hepatocytes in vitro 期刊论文
SCIENCE, 2019, 364 (6438) : 399-+
作者:  Xiang, Chengang;  Du, Yuanyuan;  Meng, Gaofan;  Yi, Liew Soon;  Sun, Shicheng;  Song, Nan;  Zhang, Xiaonan;  Xiao, Yiwei;  Wang, Jie;  Yi, Zhigang;  Liu, Yifang;  Xie, Bingqing;  Wu, Min;  Shu, Jun;  Sun, Da;  Jia, Jun;  Liang, Zhen;  Sun, Dong;  Huang, Yanxiang;  Shi, Yan;  Xu, Jun;  Lu, Fengmin;  Li, Cheng;  Xiang, Kuanhui;  Yuan, Zhenghong;  Lu, Shichun;  Deng, Hongkui
收藏  |  浏览/下载:6/0  |  提交时间:2019/11/27
Precipitation strengthening of aluminum alloys by room-temperature cyclic plasticity 期刊论文
SCIENCE, 2019, 363 (6430) : 972-+
作者:  Sun, Wenwen;  Zhu, Yuman;  Marceau, Ross;  Wang, Lingyu;  Zhang, Qi;  Gao, Xiang;  Hutchinson, Christopher
收藏  |  浏览/下载:22/0  |  提交时间:2019/11/27
Double-negative-index ceramic aerogels for thermal superinsulation 期刊论文
SCIENCE, 2019, 363 (6428) : 723-+
作者:  Xu, Xiang;  Zhang, Qiangqiang;  Hao, Menglong;  Hu, Yuan;  Lin, Zhaoyang;  Peng, Lele;  Wang, Tao;  Ren, Xuexin;  Wang, Chen;  Zhao, Zipeng;  Wan, Chengzhang;  Fei, Huilong;  Wang, Lei;  Zhu, Jian;  Sun, Hongtao;  Chen, Wenli;  Du, Tao;  Deng, Biwei;  Cheng, Gary J.;  Shakir, Imran;  Dames, Chris;  Fisher, Timothy S.;  Zhang, Xiang;  Li, Hui;  Huang, Yu;  Duan, Xiangfeng
收藏  |  浏览/下载:15/0  |  提交时间:2019/11/27
Two-dimensional magnetic crystals and emergent heterostructure devices 期刊论文
SCIENCE, 2019, 363 (6428) : 706-+
作者:  Gong, Cheng;  Zhang, Xiang
收藏  |  浏览/下载:2/0  |  提交时间:2019/11/27
Observation of chiral zero mode in inhomogeneous three-dimensional Weyl metamaterials 期刊论文
SCIENCE, 2019, 363 (6423) : 148-151
作者:  Jia, Hongwei;  Zhang, Ruixing;  Gao, Wenlong;  Guo, Qinghua;  Yang, Biao;  Hu, Jing;  Bi, Yangang;  Xiang, Yuanjiang;  Liu, Chaoxing;  Zhang, Shuang
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27
The paraventricular thalamus is a critical thalamic area for wakefulness 期刊论文
SCIENCE, 2018, 362 (6413) : 429-+
作者:  Ren, Shuancheng;  Wang, Yaling;  Yue, Faguo;  Cheng, Xiaofang;  Dang, Ruozhi;  Qiao, Qicheng;  Sun, Xueqi;  Li, Xin;  Jiang, Qian;  Yao, Jiwei;  Qin, Han;  Wang, Guanzhong;  Liao, Xiang;  Gao, Dong;  Xia, Jianxia;  Zhang, Jun;  Hu, Bo;  Yan, Junan;  Wang, Yanjiang;  Xu, Min;  Han, Yunyun;  Tang, Xiangdong;  Chen, Xiaowei;  He, Chao;  Hu, Zhian
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27