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X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease 期刊论文
Science, 2021
作者:  Sebastian Günther;  Patrick Y. A. Reinke;  Yaiza Fernández-García;  Julia Lieske;  Thomas J. Lane;  Helen M. Ginn;  Faisal H. M. Koua;  Christiane Ehrt;  Wiebke Ewert;  Dominik Oberthuer;  Oleksandr Yefanov;  Susanne Meier;  Kristina Lorenzen;  Boris Krichel;  Janine-Denise Kopicki;  Luca Gelisio;  Wolfgang Brehm;  Ilona Dunkel;  Brandon Seychell;  Henry Gieseler;  Brenna Norton-Baker;  Beatriz Escudero-Pérez;  Martin Domaracky;  Sofiane Saouane;  Alexandra Tolstikova;  Thomas A. White;  Anna Hänle;  Michael Groessler;  Holger Fleckenstein;  Fabian Trost;  Marina Galchenkova;  Yaroslav Gevorkov;  Chufeng Li;  Salah Awel;  Ariana Peck;  Miriam Barthelmess;  Frank Schlünzen;  P. Lourdu Xavier;  Nadine Werner;  Hina Andaleeb;  Najeeb Ullah;  Sven Falke;  Vasundara Srinivasan;  Bruno Alves França;  Martin Schwinzer;  Hévila Brognaro;  Cromarte Rogers;  Diogo Melo;  Joanna J. Zaitseva-Doyle;  Juraj Knoska;  Gisel E. Peña-Murillo;  Aida Rahmani Mashhour;  Vincent Hennicke;  Pontus Fischer;  Johanna Hakanpää;  Jan Meyer;  Philip Gribbon;  Bernhard Ellinger;  Maria Kuzikov;  Markus Wolf;  Andrea R. Beccari;  Gleb Bourenkov;  David von Stetten;  Guillaume Pompidor;  Isabel Bento;  Saravanan Panneerselvam;  Ivars Karpics;  Thomas R. Schneider;  Maria Marta Garcia-Alai;  Stephan Niebling;  Christian Günther;  Christina Schmidt;  Robin Schubert;  Huijong Han;  Juliane Boger;  Diana C. F. Monteiro;  Linlin Zhang;  Xinyuanyuan Sun;  Jonathan Pletzer-Zelgert;  Jan Wollenhaupt;  Christian G. Feiler;  Manfred S. Weiss;  Eike-Christian Schulz;  Pedram Mehrabi;  Katarina Karničar;  Aleksandra Usenik;  Jure Loboda;  Henning Tidow;  Ashwin Chari;  Rolf Hilgenfeld;  Charlotte Uetrecht;  Russell Cox;  Andrea Zaliani;  Tobias Beck;  Matthias Rarey;  Stephan Günther;  Dusan Turk;  Winfried Hinrichs;  Henry N. Chapman;  Arwen R. Pearson;  Christian Betzel;  Alke Meents
收藏  |  浏览/下载:13/0  |  提交时间:2021/05/14
Unearthing Neanderthal population history using nuclear and mitochondrial DNA from cave sediments 期刊论文
Science, 2021
作者:  Benjamin Vernot;  Elena I. Zavala;  Asier Gómez-Olivencia;  Zenobia Jacobs;  Viviane Slon;  Fabrizio Mafessoni;  Frédéric Romagné;  Alice Pearson;  Martin Petr;  Nohemi Sala;  Adrián Pablos;  Arantza Aranburu;  José María Bermúdez de Castro;  Eudald Carbonell;  Bo Li;  Maciej T. Krajcarz;  Andrey I. Krivoshapkin;  Kseniya A. Kolobova;  Maxim B. Kozlikin;  Michael V. Shunkov;  Anatoly P. Derevianko;  Bence Viola;  Steffi Grote;  Elena Essel;  David López Herráez;  Sarah Nagel;  Birgit Nickel;  Julia Richter;  Anna Schmidt;  Benjamin Peter;  Janet Kelso;  Richard G. Roberts;  Juan-Luis Arsuaga;  Matthias Meyer
收藏  |  浏览/下载:15/0  |  提交时间:2021/05/14
The evolutionary history of Neanderthal and Denisovan Y chromosomes 期刊论文
Science, 2020
作者:  Martin Petr;  Mateja Hajdinjak;  Qiaomei Fu;  Elena Essel;  Hélène Rougier;  Isabelle Crevecoeur;  Patrick Semal;  Liubov V. Golovanova;  Vladimir B. Doronichev;  Carles Lalueza-Fox;  Marco de la Rasilla;  Antonio Rosas;  Michael V. Shunkov;  Maxim B. Kozlikin;  Anatoli P. Derevianko;  Benjamin Vernot;  Matthias Meyer;  Janet Kelso
收藏  |  浏览/下载:9/0  |  提交时间:2020/09/30
Detection and attribution of aerosol-cloud interactions in large-domain large-eddy simulations with the ICOsahedral Non-hydrostatic model 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (9) : 5657-5678
作者:  Costa-Suros, Montserrat;  Sourdeval, Odran;  Acquistapace, Claudia;  Baars, Holger;  Henken, Cintia Carbajal;  Genz, Christa;  Hesemann, Jonas;  Jimenez, Cristofer;  Koenig, Marcel;  Kretzschmar, Jan;  Madenach, Nils;  Meyer, Catrin, I;  Schroedner, Roland;  Seifert, Patric;  Senf, Fabian;  Brueck, Matthias;  Cioni, Guido;  Engels, Jan Frederik;  Fieg, Kerstin;  Gorges, Ksenia;  Heinze, Rieke;  Siligam, Pavan Kumar;  Burkhardt, Ulrike;  Crewell, Susanne;  Hoose, Corinna;  Seifert, Axel;  Tegen, Ina;  Quaas, Johannes
收藏  |  浏览/下载:10/0  |  提交时间:2020/07/02
Late-stage oxidative C(sp(3))-H methylation 期刊论文
NATURE, 2020, 580 (7805) : 621-+
作者:  Fessler, Evelyn;  Eckl, Eva-Maria;  Schmitt, Sabine;  Mancilla, Igor Alves;  Meyer-Bender, Matthias F.;  Hanf, Monika;  Philippou-Massier, Julia;  Krebs, Stefan;  Zischka, Hans;  Jae, Lucas T.
收藏  |  浏览/下载:46/0  |  提交时间:2020/07/03

Frequently referred to as the '  magic methyl effect'  , the installation of methyl groups-especially adjacent (alpha) to heteroatoms-has been shown to dramatically increase the potency of biologically active molecules(1-3). However, existing methylation methods show limited scope and have not been demonstrated in complex settings(1). Here we report a regioselective and chemoselective oxidative C(sp(3))-H methylation method that is compatible with late-stage functionalization of drug scaffolds and natural products. This combines a highly site-selective and chemoselective C-H hydroxylation with a mild, functional-group-tolerant methylation. Using a small-molecule manganese catalyst, Mn(CF3PDP), at low loading (at a substrate/catalyst ratio of 200) affords targeted C-H hydroxylation on heterocyclic cores, while preserving electron-neutral and electron-rich aryls. Fluorine- or Lewis-acid-assisted formation of reactive iminium or oxonium intermediates enables the use of a mildly nucleophilic organoaluminium methylating reagent that preserves other electrophilic functionalities on the substrate. We show this late-stage C(sp(3))-H methylation on 41 substrates housing 16 different medicinally important cores that include electron-rich aryls, heterocycles, carbonyls and amines. Eighteen pharmacologically relevant molecules with competing sites-including drugs (for example, tedizolid) and natural products-are methylated site-selectively at the most electron rich, least sterically hindered position. We demonstrate the syntheses of two magic methyl substrates-an inverse agonist for the nuclear receptor RORc and an antagonist of the sphingosine-1-phosphate receptor-1-via late-stage methylation from the drug or its advanced precursor. We also show a remote methylation of the B-ring carbocycle of an abiraterone analogue. The ability to methylate such complex molecules at late stages will reduce synthetic effort and thereby expedite broader exploration of the magic methyl effect in pursuit of new small-molecule therapeutics and chemical probes.


A manganese-catalysed oxidative C(sp(3))-H methylation method allows a methyl group to be selectively installed into medicinally important heterocycles, providing a way to improve pharmaceuticals and better understand the '  magic methyl effect'  .


  
The ABC exporter IrtAB imports and reduces mycobacterial siderophores 期刊论文
NATURE, 2020, 580 (7803) : 413-+
作者:  Fessler, Evelyn;  Eckl, Eva-Maria;  Schmitt, Sabine;  Mancilla, Igor Alves;  Meyer-Bender, Matthias F.;  Hanf, Monika;  Philippou-Massier, Julia;  Krebs, Stefan;  Zischka, Hans;  Jae, Lucas T.
收藏  |  浏览/下载:13/0  |  提交时间:2020/07/03

Intracellular replication of the deadly pathogen Mycobacterium tuberculosis relies on the production of small organic molecules called siderophores that scavenge iron from host proteins(1). M. tuberculosis produces two classes of siderophore, lipid-bound mycobactin and water-soluble carboxymycobactin(2,3). Functional studies have revealed that iron-loaded carboxymycobactin is imported into the cytoplasm by the ATP binding cassette (ABC) transporter IrtAB(4), which features an additional cytoplasmic siderophore interaction domain(5). However, the predicted ABC exporter fold of IrtAB is seemingly contradictory to its import function. Here we show that membrane-reconstituted IrtAB is sufficient to import mycobactins, which are then reduced by the siderophore interaction domain to facilitate iron release. Structure determination by X-ray crystallography and cryo-electron microscopy not only confirms that IrtAB has an ABC exporter fold, but also reveals structural peculiarities at the transmembrane region of IrtAB that result in a partially collapsed inward-facing substrate-binding cavity. The siderophore interaction domain is positioned in close proximity to the inner membrane leaflet, enabling the reduction of membrane-inserted mycobactin. Enzymatic ATPase activity and in vivo growth assays show that IrtAB has a preference for mycobactin over carboxymycobactin as its substrate. Our study provides insights into an unusual ABC exporter that evolved as highly specialized siderophore-import machinery in mycobacteria.


  
The formation of human populations in South and Central Asia 期刊论文
SCIENCE, 2019, 365 (6457) : 999-+
作者:  Narasimhan, Vagheesh M.;  Patterson, Nick;  Moorjani, Priya;  Rohland, Nadin;  Bernardos, Rebecca;  Mallick, Swapan;  Lazaridis, Losif;  Nakatsuka, Nathan;  Olalde, Iffigo;  Lipson, Mark;  Kim, Alexander M.;  Olivieri, Luca M.;  Coppa, Alfredo;  Vidale, Massimo;  Mallory, James;  Moiseyev, Vyacheslav;  Kitov, Egor;  Monge, Janet;  Adamski, Nicole;  Alexi, Neel;  Broomandkhoshbacht, Nasreen;  Candilio, Francesca;  Callan, Kimberly;  Cheronet, Olivia;  Culleton, Brendan J.;  Ferry, Matthew;  Fernandes, Daniel;  Freilih, Suzanne;  Gamarra, Beatriz;  Gaudio, Daniel;  Hajdinjak, Mateja;  Harney, Eadaoin;  Harper, Thomas K.;  Keatin, Denise;  Lawson, Ann Marie;  Mah, Matthew;  Mandl, Kirsten;  Michel, Megan;  Novak, Mario;  Oppenheimer, Jonas;  Rai, Niraj;  Sirak, Kendra;  Slon, Viviane;  Stewardson, Kristin;  Zalzala, Fatma;  Zhang, Zhao;  Akhatov, Gaziz;  Bagashev, Anatoly N.;  Bagnera, Alessandra;  Baitanayev, Bauryzhan;  Bendezu-Sarmiento, Julio;  Bissembaev, Arman A.;  Bonora, Gian Luca;  Chargynov, Temirlan T.;  Chikisheva, Tatiana;  Dashkovskiy, Petr K.;  Derevianko, Anatoly;  Dobes, Miroslav;  Douka, Katerina;  Dubova, Nadezhda;  Duisengali, Meiram N.;  Enshin, Dmitry;  Epimakhov, Andrey;  Fribus, Alexey V.;  Fuller, Dorian;  Goryachev, Alexander;  Gromov, Andrey;  Grushin, Sergey P.;  Hanks, Bryan;  Judd, Margaret;  Kazizov, Erlan;  Khokhlov, Aleksander;  Krygin, Aleksander P.;  Kupriyanova, Elena;  Kuznetsov, Pavel;  Luiseli, Donata;  Maksudov, Farhod;  Mamedov, Asian M.;  Mamirov, Talgat B.;  Meiklejohn, Christopher;  Merrett, Deborah C.;  Micheli, Roberto;  Mochalov, Oleg;  Mustafokulov, Samariddin;  Nayak, Ayushi;  Pettener, Davide;  Potts, Richard;  Razhev, Dmitry;  Rykun, Marina;  Sarno, Stefania;  Savenkova, Tatyana M.;  Sikhymbaeva, Kulyan;  Slepchenko, Sergey M.;  Soltobaev, Oroz A.;  Stepanova, Nadezhda;  Svyatko, Svetlana;  Tabaldiev, Kubatbek;  Teschler-Nicola, Maria;  Tishkin, Alexey A.;  Tkachev, Vitaly V.;  Vasilyev, Sergey;  Veleminsky, Petr;  Voyakin, Dmitriy;  Yermolayeva, Antonina;  Zahir, Muhammad;  Zubkov, Valery S.;  Zubova, Alisa;  Shinde, Vasant S.;  Lalueza-Fox, Carles;  Meyer, Matthias;  Anthony, David;  Boivin, Nicole;  Thangaraj, Kumnarasamy;  Kennett, Douglas J.;  Frachetti, Michael;  Pinhasi, Ron;  Reich, David
收藏  |  浏览/下载:22/0  |  提交时间:2019/11/27
Pleistocene North African genomes link Near Eastern and sub-Saharan African human populations 期刊论文
SCIENCE, 2018, 360 (6388) : 548-+
作者:  van de Loosdrecht, Marieke;  Bouzouggar, Abdeljalil;  Humphrey, Louise;  Posth, Cosimo;  Barton, Nick;  Aximu-Petri, Ayinuer;  Nickel, Birgit;  Nagel, Sarah;  Talbi, El Hassan;  El Hajraoui, Mohammed Abdeljalil;  Amzazi, Saaid;  Hublin, Jean-Jacques;  Paeaebo, Svante;  Schiffels, Stephan;  Meyer, Matthias;  Haak, Wolfgang;  Jeong, Choongwon;  Krause, Johannes
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
A high-coverage Neandertal genome from Vindija Cave in Croatia 期刊论文
SCIENCE, 2017, 358 (6363) : 655-658
作者:  Pruefer, Kay;  de Filippo, Cesare;  Grote, Steffi;  Mafessoni, Fabrizio;  Korlevic, Petra;  Hajdinjak, Mateja;  Vernot, Benjamin;  Skov, Laurits;  Hsieh, Pinghsun;  Peyregne, Stephane;  Reher, David;  Hopfe, Charlotte;  Nagel, Sarah;  Maricic, Tomislav;  Fu, Qiaomei;  Theunert, Christoph;  Rogers, Rebekah;  Skoglund, Pontus;  Chintalapati, Manjusha;  Dannemann, Michael;  Nelson, Bradley J.;  Key, Felix M.;  Rudan, Pavao;  Kucan, Zeljko;  Gusic, Ivan;  Golovanova, Liubov V.;  Doronichev, Vladimir B.;  Patterson, Nick;  Reich, David;  Eichler, Evan E.;  Slatkin, Montgomery;  Schierup, Mikkel H.;  Andres, Aida M.;  Kelso, Janet;  Meyer, Matthias;  Paabo, Svante
收藏  |  浏览/下载:15/0  |  提交时间:2019/11/27
Mismatch repair deficiency predicts response of solid tumors to PD-1 blockade 期刊论文
SCIENCE, 2017, 357 (6349) : 409-413
作者:  Le, Dung T.;  Durham, Jennifer N.;  Smith, Kellie N.;  Wang, Hao;  Bartlett, Bjarne R.;  Aulakh, Laveet K.;  Lu, Steve;  Kemberling, Holly;  Wilt, Cara;  Luber, Brandon S.;  Wong, Fay;  Azad, Nilofer S.;  Rucki, Agnieszka A.;  Laheru, Dan;  Donehower, Ross;  Zaheer, Atif;  Fisher, George A.;  Crocenzi, Todd S.;  Lee, James J.;  Greten, Tim F.;  Duffy, Austin G.;  Ciombor, Kristen K.;  Eyring, Aleksandra D.;  Lam, Bao H.;  Joe, Andrew;  Kang, S. Peter;  Holdhoff, Matthias;  Danilova, Ludmila;  Cope, Leslie;  Meyer, Christian;  Zhou, Shibin;  Goldberg, Richard M.;  Armstrong, Deborah K.;  Bever, Katherine M.;  Fader, Amanda N.;  Taube, Janis;  Housseau, Franck;  Spetzler, David;  Xiao, Nianqing;  Pardoll, Drew M.;  Papadopoulos, Nickolas;  Kinzler, Kenneth W.;  Eshleman, James R.;  Vogelstein, Bert;  Anders, Robert A.;  Diaz, Luis A., Jr.
收藏  |  浏览/下载:14/0  |  提交时间:2019/11/27