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HBO1 is required for the maintenance of leukaemia stem cells 期刊论文
NATURE, 2020, 577 (7789) : 266-+
作者:  MacPherson, Laura;  Anokye, Juliana;  Yeung, Miriam M.;  Lam, Enid Y. N.;  Chan, Yih-Chih;  Weng, Chen-Fang;  Yeh, Paul;  Knezevic, Kathy;  Butler, Miriam S.;  Hoegl, Annabelle;  Chan, Kah-Lok;  Burr, Marian L.;  Gearing, Linden J.;  Willson, Tracy;  Liu, Joy;  Choi, Jarny;  Yang, Yuqing;  Bilardi, Rebecca A.;  Falk, Hendrik;  Nghi Nguyen;  Stupple, Paul A.;  Peat, Thomas S.;  Zhang, Ming;  de Silva, Melanie;  Carrasco-Pozo, Catalina;  Avery, Vicky M.;  Khoo, Poh Sim;  Dolezal, Olan;  Dennis, Matthew L.;  Nuttall, Stewart;  Surjadi, Regina;  Newman, Janet;  Ren, Bin;  Leaver, David J.;  Sun, Yuxin;  Baell, Jonathan B.;  Dovey, Oliver;  Vassiliou, George S.;  Grebien, Florian;  Dawson, Sarah-Jane;  Street, Ian P.;  Monahan, Brendon J.;  Burns, Christopher J.;  Choudhary, Chunaram;  Blewitt, Marnie E.;  Voss, Anne K.;  Thomas, Tim;  Dawson, Mark A.
收藏  |  浏览/下载:16/0  |  提交时间:2020/07/03

Acute myeloid leukaemia (AML) is a heterogeneous disease characterized by transcriptional dysregulation that results in a block in differentiation and increased malignant self-renewal. Various epigenetic therapies aimed at reversing these hallmarks of AML have progressed into clinical trials, but most show only modest efficacy owing to an inability to effectively eradicate leukaemia stem cells (LSCs)(1). Here, to specifically identify novel dependencies in LSCs, we screened a bespoke library of small hairpin RNAs that target chromatin regulators in a unique ex vivo mouse model of LSCs. We identify the MYST acetyltransferase HBO1 (also known as KAT7 or MYST2) and several known members of the HBO1 protein complex as critical regulators of LSC maintenance. Using CRISPR domain screening and quantitative mass spectrometry, we identified the histone acetyltransferase domain of HBO1 as being essential in the acetylation of histone H3 at K14. H3 acetylated at K14 (H3K14ac) facilitates the processivity of RNA polymerase II to maintain the high expression of key genes (including Hoxa9 and Hoxa10) that help to sustain the functional properties of LSCs. To leverage this dependency therapeutically, we developed a highly potent small-molecule inhibitor of HBO1 and demonstrate its mode of activity as a competitive analogue of acetyl-CoA. Inhibition of HBO1 phenocopied our genetic data and showed efficacy in a broad range of human cell lines and primary AML cells from patients. These biological, structural and chemical insights into a therapeutic target in AML will enable the clinical translation of these findings.


  
Securin-independent regulation of separase by checkpoint-induced shugoshin-MAD2 期刊论文
NATURE, 2020, 580 (7804) : 536-+
作者:  Redhai, Siamak;  Pilgrim, Clare;  Gaspar, Pedro;  van Giesen, Lena;  Lopes, Tatiana;  Riabinina, Olena;  Grenier, Theodore;  Milona, Alexandra;  Chanana, Bhavna;  Swadling, Jacob B.;  Wang, Yi-Fang;  Dahalan, Farah;  Yuan, Michaela;  Wilsch-Brauninger, Michaela;  Lin, Wei-hsiang;  Dennison, Nathan;  Capriotti, Paolo;  Lawniczak, Mara K. N.;  Baines, Richard A.;  Warnecke, Tobias;  Windbichler, Nikolai;  Leulier, Francois;  Bellono, Nicholas W.;  Miguel-Aliaga, Irene
收藏  |  浏览/下载:32/0  |  提交时间:2020/07/03

Shugoshin and MAD2 regulate separase-mediated chromosome separation during mitosis, in parallel to a previously identified mechanism involving the anaphase inhibitor securin.


Separation of eukaryotic sister chromatids during the cell cycle is timed by the spindle assembly checkpoint (SAC) and ultimately triggered when separase cleaves cohesion-mediating cohesin(1-3). Silencing of the SAC during metaphase activates the ubiquitin ligase APC/C (anaphase-promoting complex, also known as the cyclosome) and results in the proteasomal destruction of the separase inhibitor securin(1). In the absence of securin, mammalian chromosomes still segregate on schedule, but it is unclear how separase is regulated under these conditions(4,5). Here we show that human shugoshin 2 (SGO2), an essential protector of meiotic cohesin with unknown functions in the soma(6,7), is turned into a separase inhibitor upon association with SAC-activated MAD2. SGO2-MAD2 can functionally replace securin and sequesters most separase in securin-knockout cells. Acute loss of securin and SGO2, but not of either protein individually, resulted in separase deregulation associated with premature cohesin cleavage and cytotoxicity. Similar to securin(8,9), SGO2 is a competitive inhibitor that uses a pseudo-substrate sequence to block the active site of separase. APC/C-dependent ubiquitylation and action of the AAA-ATPase TRIP13 in conjunction with the MAD2-specific adaptor p31(comet) liberate separase from SGO2-MAD2 in vitro. The latter mechanism facilitates a considerable degree of sister chromatid separation in securin-knockout cells that lack APC/C activity. Thus, our results identify an unexpected function of SGO2 in mitotically dividing cells and a mechanism of separase regulation that is independent of securin but still supervised by the SAC.


  
Signatures of self-organized criticality in an ultracold atomic gas 期刊论文
NATURE, 2020, 577 (7791) : 481-+
作者:  MacPherson, Laura;  Anokye, Juliana;  Yeung, Miriam M.;  Lam, Enid Y. N.;  Chan, Yih-Chih;  Weng, Chen-Fang;  Yeh, Paul;  Knezevic, Kathy;  Butler, Miriam S.;  Hoegl, Annabelle;  Chan, Kah-Lok;  Burr, Marian L.;  Gearing, Linden J.;  Willson, Tracy;  Liu, Joy;  Choi, Jarny;  Yang, Yuqing;  Bilardi, Rebecca A.;  Falk, Hendrik;  Nghi Nguyen;  Stupple, Paul A.;  Peat, Thomas S.;  Zhang, Ming;  De Silva, Melanie;  Carrasco-Pozo, Catalina;  Avery, Vicky M.;  Khoo, Sim;  Dolezal, Olan;  Dennis, Matthew L.;  Nuttall, Stewart;  Surjadi, Regina;  Newman, Janet;  Ren, Bin;  Leaver, David J.;  Sun, Yuxin;  Baell, Jonathan B.;  Dovey, Oliver;  Vassiliou, George S.;  Grebien, Florian;  Dawson, Sarah-Jane;  Street, Ian P.;  Monahan, Brendon J.;  Burns, Christopher J.;  Choudhary, Chunaram;  Blewitt, Marnie E.;  Voss, Anne K.;  Thomas, Tim;  Dawson, Mark A.
收藏  |  浏览/下载:24/0  |  提交时间:2020/07/03

Self-organized criticality is an elegant explanation of how complex structures emerge and persist throughout nature(1), and why such structures often exhibit similar scale-invariant properties(2-9). Although self-organized criticality is sometimes captured by simple models that feature a critical point as an attractor for the dynamics(10-15), the connection to real-world systems is exceptionally hard to test quantitatively(16-21). Here we observe three key signatures of self-organized criticality in the dynamics of a driven-dissipative gas of ultracold potassium atoms: self-organization to a stationary state that is largely independent of the initial conditions  scale-invariance of the final density characterized by a unique scaling function  and large fluctuations of the number of excited atoms (avalanches) obeying a characteristic power-law distribution. This work establishes a well-controlled platform for investigating self-organization phenomena and non-equilibrium criticality, with experimental access to the underlying microscopic details of the system.


A driven-dissipative gas of ultracold potassium atoms is used to demonstrate three key signatures of self-organized criticality, and provides a system in which the phenomenon can be experimentally tested.


  
Alloy-assisted deposition of three-dimensional arrays of atomic gold catalyst for crystal growth studies 期刊论文
NATURE COMMUNICATIONS, 2017, 8
作者:  Fang, Yin;  Jiang, Yuanwen;  Cherukara, Mathew J.;  Shi, Fengyuan;  Koehler, Kelliann;  Freyermuth, George;  Isheim, Dieter;  Narayanan, Badri;  Nicholls, Alan W.;  Seidman, David N.;  Sankaranarayanan, Subramanian K. R. S.;  Tian, Bozhi
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27
Field-experiment constraints on the enhancement of the terrestrial carbon sink by CO(2 )fertilization 期刊论文
NATURE GEOSCIENCE, 2019, 12 (10) : 809-+
作者:  Liu, Yongwen;  Piao, Shilong;  Gasser, Thomas;  Ciais, Philippe;  Yang, Hui;  Wang, Han;  Keenan, Trevor F.;  Huang, Mengtian;  Wan, Shiqiang;  Song, Jian;  Wang, Kai;  Janssens, Ivan A.;  Penuelas, Josep;  Huntingford, Chris;  Wang, Xuhui;  Arain, Muhammad Altaf;  Fang, Yuanyuan;  Fisher, Joshua B.;  Huang, Maoyi;  Huntzinger, Deborah N.;  Ito, Akihiko;  Jain, Atul K.;  Mao, Jiafu;  Michalak, Anna M.;  Peng, Changhui;  Poulter, Benjamin;  Schwalm, Christopher;  Shi, Xiaoying;  Tian, Hanqin;  Wei, Yaxing;  Zeng, Ning;  Zhu, Qiuan;  Wang, Tao
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
Global vegetation biomass production efficiency constrained by models and observations 期刊论文
GLOBAL CHANGE BIOLOGY, 2019
作者:  He, Yue;  Peng, Shushi;  Liu, Yongwen;  Li, Xiangyi;  Wang, Kai;  Ciais, Philippe;  Arain, M. Altaf;  Fang, Yuanyuan;  Fisher, Joshua B.;  Goll, Daniel;  Hayes, Daniel;  Huntzinger, Deborah N.;  Ito, Akihiko;  Jain, Atul K.;  Janssens, Ivan A.;  Mao, Jiafu;  Matteo, Campioli;  Michalak, Anna M.;  Peng, Changhui;  Penuelas, Josep;  Poulter, Benjamin;  Qin, Dahe;  Ricciuto, Daniel M.;  Schaefer, Kevin;  Schwalm, Christopher R.;  Shi, Xiaoying;  Tian, Hanqin;  Vicca, Sara;  Wei, Yaxing;  Zeng, Ning;  Zhu, Qiuan
收藏  |  浏览/下载:14/0  |  提交时间:2019/11/27
biomass production  BPE  carbon sink  emergent constraint  terrestrial biosphere model  
Changes in HCFC Emissions in China During 2011-2017 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019, 46 (16) : 10034-10042
作者:  Fang, X.;  Yao, B.;  Vollmer, M. K.;  Reimann, S.;  Liu, L.;  Chen, L.;  Prinn, R. G.;  Hu, J.
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27
Whole-genome sequencing reveals novel tandem-duplication hotspots and a prognostic mutational signature in gastric cancer 期刊论文
NATURE COMMUNICATIONS, 2019, 10
作者:  Xing, Rui;  Zhou, Yong;  Yu, Jun;  Yu, Yingyan;  Nie, Yongzhan;  Luo, Wen;  Yang, Chao;  Xiong, Teng;  Wu, William K. K.;  Li, Zhongwu;  Bing, Yang;  Lin, Shuye;  Zhang, Yaping;  Hu, Yingqi;  Li, Lin;  Han, Lijuan;  Yang, Chen;  Huang, Shaogang;  Huang, Suiping;  Zhou, Rui;  Li, Jing;  Wu, Kaichun;  Fan, Daiming;  Tang, Guangbo;  Dou, Jianhua;  Zhu, Zhenggang;  Ji, Jiafu;  Fang, Xiaodong;  Lu, Youyong
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27
Characterization of organic aerosols from a Chinese megacity during winter: predominance of fossil fuel combustion 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2019, 19 (7) : 5147-5164
作者:  Haque, Md. Mozammel;  Kawamura, Kimitaka;  Deshmukh, Dhananjay K.;  Fang, Cao;  Song, Wenhuai;  Bao Mengying;  Zhang, Yan-Lin
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/26
Interactions between the atmosphere, cryosphere, and ecosystems at northern high latitudes 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2019, 19 (3) : 2015-2061
作者:  Boy, Michael;  Thomson, Erik S.;  Acosta Navarro, Juan-C.;  Arnalds, Olafur;  Batchvarova, Ekaterina;  Back, Jaana;  Berninger, Frank;  Bilde, Merete;  Brasseur, Zoe;  Dagsson-Waldhauserova, Pavla;  Castarede, Dimitri;  Dalirian, Maryam;  de Leeuw, Gerrit;  Dragosics, Monika;  Duplissy, Ella-Maria;  Duplissy, Jonathan;  Ekman, Annica M. L.;  Fang, Keyan;  Gallet, Jean-Charles;  Glasius, Marianne;  Gryning, Sven-Erik;  Grythe, Henrik;  Hansson, Hans-Christen;  Hansson, Margareta;  Isaksson, Elisabeth;  Iversen, Trond;  Jonsdottir, Ingibjorg;  Kasurinen, Ville;  Kirkevag, Alf;  Korhola, Atte;  Krejci, Radovan;  Kristjansson, Jon Egill;  Lappalainen, Hanna K.;  Lauri, Antti;  Lepparanta, Matti;  Lihavainen, Heikki;  Makkonen, Risto;  Massling, Andreas;  Meinander, Outi;  Nilsson, E. Douglas;  Olafsson, Haraldur;  Pettersson, Jan B. C.;  Prisle, Nonne L.;  Riipinen, Ilona;  Roldin, Pontus;  Ruppel, Meri;  Salter, Matthew;  Sand, Maria;  Seland, Oyvind;  Seppa, Heikki;  Skov, Henrik;  Soares, Joana;  Stohl, Andreas;  Strom, Johan;  Svensson, Jonas;  Swietlicki, Erik;  Tabakova, Ksenia;  Thorsteinsson, Throstur;  Virkkula, Aki;  Weyhenmeyer, Gesa A.;  Wu, Yusheng;  Zieger, Paul;  Kulmala, Markku
收藏  |  浏览/下载:14/0  |  提交时间:2019/04/09