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Array programming with NumPy 期刊论文
Nature, 2020
作者:  Charles R. Harris;  K. Jarrod Millman;  Sté;  fan J. van der Walt;  Ralf Gommers;  Pauli Virtanen;  David Cournapeau;  Eric Wieser;  Julian Taylor;  Sebastian Berg;  Nathaniel J. Smith;  Robert Kern;  Matti Picus;  Stephan Hoyer;  Marten H. van Kerkwijk;  Matthew Brett;  Allan Haldane;  Jaime Ferná;  ndez del Rí;  o;  Mark Wiebe;  Pearu Peterson;  Pierre Gé;  rard-Marchant;  Kevin Sheppard;  Tyler Reddy;  Warren Weckesser;  Hameer Abbasi;  Christoph Gohlke;  Travis E. Oliphant
收藏  |  浏览/下载:14/0  |  提交时间:2020/09/22
North Atlantic climate far more predictable than models imply 期刊论文
Nature, 2020
作者:  D. M. Smith;  A. A. Scaife;  R. Eade;  P. Athanasiadis;  A. Bellucci;  I. Bethke;  R. Bilbao;  L. F. Borchert;  L.-P. Caron;  F. Counillon;  G. Danabasoglu;  T. Delworth;  F. J. Doblas-Reyes;  N. J. Dunstone;  V. Estella-Perez;  S. Flavoni;  L. Hermanson;  N. Keenlyside;  V. Kharin;  M. Kimoto;  W. J. Merryfield;  J. Mignot;  T. Mochizuki;  K. Modali;  P.-A. Monerie;  W. A. Mü;  ller;  D. Nicolí;  P. Ortega;  K. Pankatz;  H. Pohlmann;  J. Robson;  P. Ruggieri;  R. Sospedra-Alfonso;  D. Swingedouw;  Y. Wang;  S. Wild;  S. Yeager;  X. Yang;  L. Zhang
收藏  |  浏览/下载:12/0  |  提交时间:2020/08/09
Megacity and local contributions to regional air pollution: an aircraft case study over London 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (12) : 7193-7216
作者:  Ashworth, Kirsti;  Bucci, Silvia;  Gallimore, Peter J.;  Lee, Junghwa;  Nelson, Beth S.;  Sanchez-Marroquin, Alberto;  Schimpf, Marina B.;  Smith, Paul D.;  Drysdale, Will S.;  Hopkins, Jim R.;  Lee, James D.;  Pitt, Joe R.;  Di Carlo, Piero;  Krejci, Radovan;  McQuaid, James B.
收藏  |  浏览/下载:17/0  |  提交时间:2020/06/29
Pharmacologic fibroblast reprogramming into photoreceptors restores vision 期刊论文
NATURE, 2020, 581 (7806) : 83-+
作者:  Jiang, Mingkai;  Medlyn, Belinda E.;  Drake, John E.;  Duursma, Remko A.;  Anderson, Ian C.;  Barton, Craig V. M.;  Boer, Matthias M.;  Carrillo, Yolima;  Castaneda-Gomez, Laura;  Collins, Luke;  Crous, Kristine Y.;  De Kauwe, Martin G.;  dos Santos, Bruna M.;  Emmerson, Kathryn M.;  Facey, Sarah L.;  Gherlenda, Andrew N.;  Gimeno, Teresa E.;  Hasegawa, Shun;  Johnson, Scott N.;  Kannaste, Astrid;  Macdonald, Catriona A.;  Mahmud, Kashif;  Moore, Ben D.;  Nazaries, Loic;  Neilson, Elizabeth H. J.;  Nielsen, Uffe N.;  Niinemets, Ulo;  Noh, Nam Jin;  Ochoa-Hueso, Raul;  Pathare, Varsha S.;  Pendall, Elise;  Pihlblad, Johanna;  Pineiro, Juan;  Powell, Jeff R.;  Power, Sally A.;  Reich, Peter B.;  Renchon, Alexandre A.;  Riegler, Markus;  Rinnan, Riikka;  Rymer, Paul D.;  Salomon, Roberto L.;  Singh, Brajesh K.;  Smith, Benjamin;  Tjoelker, Mark G.;  Walker, Jennifer K. M.;  Wujeska-Klause, Agnieszka;  Yang, Jinyan;  Zaehle, Soenke;  Ellsworth, David S.
收藏  |  浏览/下载:45/0  |  提交时间:2020/07/03

Photoreceptor loss is the final common endpoint in most retinopathies that lead to irreversible blindness, and there are no effective treatments to restore vision(1,2). Chemical reprogramming of fibroblasts offers an opportunity to reverse vision loss  however, the generation of sensory neuronal subtypes such as photoreceptors remains a challenge. Here we report that the administration of a set of five small molecules can chemically induce the transformation of fibroblasts into rod photoreceptor-like cells. The transplantation of these chemically induced photoreceptor-like cells (CiPCs) into the subretinal space of rod degeneration mice (homozygous for rd1, also known as Pde6b) leads to partial restoration of the pupil reflex and visual function. We show that mitonuclear communication is a key determining factor for the reprogramming of fibroblasts into CiPCs. Specifically, treatment with these five compounds leads to the translocation of AXIN2 to the mitochondria, which results in the production of reactive oxygen species, the activation of NF-kappa B and the upregulation of Ascl1. We anticipate that CiPCs could have therapeutic potential for restoring vision.


A set of five small molecules can induce the transformation of fibroblasts into rod photoreceptor-like cells, which can partially restore pupil reflex and visual function when transplanted into a rod degeneration mouse model.


  
REPLY TO ZHANG ET AL.: Using long-term all-available Landsat data to study water bodies over large areas represents a paradigm shift 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (12) : 6310-6311
作者:  Feng, Shuailong;  Liu, Shuguang;  Huang, Zhihong;  Jing, Lei;  Zhao, Meifang;  Peng, Xi;  Yan, Wende;  Wu, Yiping;  Lv, Yihe;  Smith, Andrew R.;  McDonald, Morag A.;  Patil, Sopan D.;  Sarkissian, Arbi J.;  Shi, Zhihua;  Xia, Jun;  Ogbodo, U. S.
收藏  |  浏览/下载:10/0  |  提交时间:2020/05/13
Early Holocene crop cultivation and landscape modification in Amazonia 期刊论文
NATURE, 2020, 581 (7807) : 190-+
作者:  Hendershot, J. Nicholas;  Smith, Jeffrey R.;  Anderson, Christopher B.;  Letten, Andrew D.;  Frishkoff, Luke O.;  Zook, Jim R.;  Fukami, Tadashi;  Daily, Gretchen C.
收藏  |  浏览/下载:32/0  |  提交时间:2020/07/03

The onset of plant cultivation is one of the most important cultural transitions in human history(1-4). Southwestern Amazonia has previously been proposed as an early centre of plant domestication, on the basis of molecular markers that show genetic similarities between domesticated plants and wild relatives(4-6). However, the nature of the early human occupation of southwestern Amazonia, and the history of plant cultivation in this region, are poorly understood. Here we document the cultivation of squash (Cucurbita sp.) at about 10,250 calibrated years before present (cal. yr bp), manioc (Manihot sp.) at about 10,350 cal. yr bp and maize (Zea mays) at about 6,850 cal. yr bp, in the Llanos de Moxos (Bolivia). We show that, starting at around 10,850 cal. yr bp, inhabitants of this region began to create a landscape that ultimately comprised approximately 4,700 artificial forest islands within a treeless, seasonally flooded savannah. Our results confirm that the Llanos de Moxos is a hotspot for early plant cultivation and demonstrate that-ever since their arrival in Amazonia-humans have markedly altered the landscape, with lasting repercussions for habitat heterogeneity and species conservation.


  
Global gene flow releases invasive plants from environmental constraints on genetic diversity 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (8) : 4218-4227
作者:  Smith, Annabel L.;  Hodkinson, Trevor R.;  Villellas, Jesus;  Catford, Jane A.;  Csergo, Anna Maria;  Blomberg, Simone P.;  Crone, Elizabeth E.;  Ehrlen, Johan;  Garcia, Maria B.;  Laine, Anna-Liisa;  Roach, Deborah A.;  Salguero-Gomez, Roberto;  Wardle, Glenda M.;  Childs, Dylan Z.;  Elderd, Bret D.;  Finn, Alain;  Munne-Bosch, Sergi;  Baudraz, Maude E. A.;  Bodis, Judit;  Brearley, Francis Q.;  Bucharova, Anna;  Caruso, Christina M.;  Duncan, Richard P.;  Dwyerh, Johnm.;  Gooden, Ben;  Groenteman, Ronny;  Hamre, Liv Norunn;  Helm, Aveliina;  Kelly, Ruth;  Laanisto, Lauri;  Lonati, Michele;  Moore, Joslin L.;  Morales, Melanie;  Olsen, Siri Lie;  Partel, Meelis;  Petry, William K.;  Ramula, Satu;  Rasmussen, Pil U.;  Enri, Simone Ravetto;  Roeder, Anna;  Roscher, Christiane;  Saastamoinen, Marjo;  Tack, Ayco J. M.;  Topper, Joachim Paul;  Vose, Gregory E.;  Wandrag, Elizabeth M.;  Wingler, Astrid;  Buckley, Yvonne M.
收藏  |  浏览/下载:5/0  |  提交时间:2020/05/13
plant invasion  adaptation  global change  population genetics  demography  
Hydrogen peroxide sensor HPCA1 is an LRR receptor kinase in Arabidopsis 期刊论文
NATURE, 2020, 578 (7796) : 577-+
作者:  Bogomilov, M.;  Tsenov, R.;  Vankova-Kirilova, G.;  Song, Y. P.;  Tang, J. Y.;  Li, Z. H.;  Bertoni, R.;  Bonesini, M.;  Chignoli, F.;  Mazza, R.;  Palladino, V;  de Bari, A.;  Orestano, D.;  Tortora, L.;  Kuno, Y.;  Sakamoto, H.;  Sato, A.;  Ishimoto, S.;  Chung, M.;  Sung, C. K.;  Filthaut, F.;  Jokovic, D.;  Maletic, D.;  Savic, M.;  Jovancevic, N.;  Nikolov, J.;  Vretenar, M.;  Ramberger, S.;  Asfandiyarov, R.;  Blondel, A.;  Drielsma, F.;  Karadzhov, Y.;  Boyd, S.;  Greis, J. R.;  Lord, T.;  Pidcott, C.;  Taylor, I;  Charnley, G.;  Collomb, N.;  Dumbell, K.;  Gallagher, A.;  Grant, A.;  Griffiths, S.;  Hartnett, T.;  Martlew, B.;  Moss, A.;  Muir, A.;  Mullacrane, I;  Oates, A.;  Owens, P.;  Stokes, G.;  Warburton, P.;  White, C.;  Adams, D.;  Bayliss, V;  Boehm, J.;  Bradshaw, T. W.;  Brown, C.;  Courthold, M.;  Govans, J.;  Hills, M.;  Lagrange, J-B;  Macwaters, C.;  Nichols, A.;  Preece, R.;  Ricciardi, S.;  Rogers, C.;  Stanley, T.;  Tarrant, J.;  Tucker, M.;  Watson, S.;  Wilson, A.;  Bayes, R.;  Nugent, J. C.;  Soler, F. J. P.;  Chatzitheodoridis, G. T.;  Dick, A. J.;  Ronald, K.;  Whyte, C. G.;  Young, A. R.;  Gamet, R.;  Cooke, P.;  Blackmore, V. J.;  Colling, D.;  Dobbs, A.;  Dornan, P.;  Franchini, P.;  Hunt, C.;  Jurj, P. B.;  Kurup, A.;  Long, K.;  Martyniak, J.;  Middleton, S.;  Pasternak, J.;  Uchida, M. A.;  Cobb, J. H.;  Booth, C. N.;  Hodgson, P.;  Langlands, J.;  Overton, E.;  Pec, V;  Smith, P. J.;  Wilbur, S.;  Ellis, M.;  Gardener, R. B. S.;  Kyberd, P.;  Nebrensky, J. J.;  DeMello, A.;  Gourlay, S.;  Lambert, A.;  Li, D.;  Luo, T.;  Prestemon, S.;  Virostek, S.;  Palmer, M.;  Witte, H.;  Adey, D.;  Bross, A. D.;  Bowring, D.;  Liu, A.;  Neuffer, D.;  Popovic, M.;  Rubinov, P.;  Freemire, B.;  Hanlet, P.;  Kaplan, D. M.;  Mohayai, T. A.;  Rajaram, D.;  Snopok, P.;  Torun, Y.;  Cremaldi, L. M.;  Sanders, D. A.;  Summers, D. J.;  Coney, L. R.;  Hanson, G. G.;  Heidt, C.
收藏  |  浏览/下载:33/0  |  提交时间:2020/07/03

Hydrogen peroxide (H2O2) is a major reactive oxygen species in unicellular and multicellular organisms, and is produced extracellularly in response to external stresses and internal cues(1-4). H2O2 enters cells through aquaporin membrane proteins and covalently modifies cytoplasmic proteins to regulate signalling and cellular processes. However, whether sensors for H2O2 also exist on the cell surface remains unknown. In plant cells, H2O2 triggers an influx of Ca2+ ions, which is thought to be involved in H2O2 sensing and signalling. Here, by using forward genetic screens based on Ca2+ imaging, we isolated hydrogen-peroxide-induced Ca(2+)increases (hpca) mutants in Arabidopsis, and identified HPCA1 as a leucine-rich-repeat receptor kinase belonging to a previously uncharacterized subfamily that features two extra pairs of cysteine residues in the extracellular domain. HPCA1 is localized to the plasma membrane and is activated by H2O2 via covalent modification of extracellular cysteine residues, which leads to autophosphorylation of HPCA1. HPCA1 mediates H2O2-induced activation of Ca2+ channels in guard cells and is required for stomatal closure. Our findings help to identify how the perception of extracellular H2O2 is integrated with responses to various external stresses and internal cues in plants, and have implications for the design of crops with enhanced fitness.


HPCA1, a member of a previously uncharacterized subfamily of leucine-rich-repeat receptor-like kinases, is the hydrogen-peroxide sensor at the plasma membrane in Arabidopsis.


  
Processive extrusion of polypeptide loops by a Hsp100 disaggregase (vol 74, pg 212, 2020) 期刊论文
NATURE, 2020
作者:  McBrien, Julia Bergild;  Mavigner, Maud;  Franchitti, Lavinia;  Smith, S. Abigail;  White, Erick;  Tharp, Gregory K.;  Walum, Hasse;  Busman-Suhay, Kathleen;  Aguilera-Sandoval, Christian R.;  Thayer, William O.;  Spagnuolo, Rae Ann;  Kovarova, Martina;  Wahl, Angela;  Cervasi, Barbara;  Margolis, David M.;  Vanderford, Thomas H.;  Carnathan, Diane G.;  Paiardini, Mirko;  Lifson, Jeffrey D.;  Lee, John H.;  Safrit, Jeffrey T.;  Bosinger, Steven E.;  Estes, Jacob D.;  Derdeyn, Cynthia A.;  Garcia, J. Victor;  Kulpa, Deanna A.;  Chahroudi, Ann;  Silvestri, Guido
收藏  |  浏览/下载:21/0  |  提交时间:2020/07/03
Accelerating exhumation in the Eocene North American Cordilleran hinterland: Implications from detrital zircon (U-Th)/(He-Pb) double dating 期刊论文
GEOLOGICAL SOCIETY OF AMERICA BULLETIN, 2020, 132 (1-2) : 198-214
作者:  Canada, Andrew S.;  Cassel, Elizabeth J.;  Stockli, Daniel F.;  Smith, M. Elliot;  Jicha, Brian R.;  Singer, Brad S.
收藏  |  浏览/下载:6/0  |  提交时间:2020/07/02