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HBO1 is required for the maintenance of leukaemia stem cells 期刊论文
NATURE, 2020, 577 (7789) : 266-+
作者:  MacPherson, Laura;  Anokye, Juliana;  Yeung, Miriam M.;  Lam, Enid Y. N.;  Chan, Yih-Chih;  Weng, Chen-Fang;  Yeh, Paul;  Knezevic, Kathy;  Butler, Miriam S.;  Hoegl, Annabelle;  Chan, Kah-Lok;  Burr, Marian L.;  Gearing, Linden J.;  Willson, Tracy;  Liu, Joy;  Choi, Jarny;  Yang, Yuqing;  Bilardi, Rebecca A.;  Falk, Hendrik;  Nghi Nguyen;  Stupple, Paul A.;  Peat, Thomas S.;  Zhang, Ming;  de Silva, Melanie;  Carrasco-Pozo, Catalina;  Avery, Vicky M.;  Khoo, Poh Sim;  Dolezal, Olan;  Dennis, Matthew L.;  Nuttall, Stewart;  Surjadi, Regina;  Newman, Janet;  Ren, Bin;  Leaver, David J.;  Sun, Yuxin;  Baell, Jonathan B.;  Dovey, Oliver;  Vassiliou, George S.;  Grebien, Florian;  Dawson, Sarah-Jane;  Street, Ian P.;  Monahan, Brendon J.;  Burns, Christopher J.;  Choudhary, Chunaram;  Blewitt, Marnie E.;  Voss, Anne K.;  Thomas, Tim;  Dawson, Mark A.
收藏  |  浏览/下载:16/0  |  提交时间:2020/07/03

Acute myeloid leukaemia (AML) is a heterogeneous disease characterized by transcriptional dysregulation that results in a block in differentiation and increased malignant self-renewal. Various epigenetic therapies aimed at reversing these hallmarks of AML have progressed into clinical trials, but most show only modest efficacy owing to an inability to effectively eradicate leukaemia stem cells (LSCs)(1). Here, to specifically identify novel dependencies in LSCs, we screened a bespoke library of small hairpin RNAs that target chromatin regulators in a unique ex vivo mouse model of LSCs. We identify the MYST acetyltransferase HBO1 (also known as KAT7 or MYST2) and several known members of the HBO1 protein complex as critical regulators of LSC maintenance. Using CRISPR domain screening and quantitative mass spectrometry, we identified the histone acetyltransferase domain of HBO1 as being essential in the acetylation of histone H3 at K14. H3 acetylated at K14 (H3K14ac) facilitates the processivity of RNA polymerase II to maintain the high expression of key genes (including Hoxa9 and Hoxa10) that help to sustain the functional properties of LSCs. To leverage this dependency therapeutically, we developed a highly potent small-molecule inhibitor of HBO1 and demonstrate its mode of activity as a competitive analogue of acetyl-CoA. Inhibition of HBO1 phenocopied our genetic data and showed efficacy in a broad range of human cell lines and primary AML cells from patients. These biological, structural and chemical insights into a therapeutic target in AML will enable the clinical translation of these findings.


  
Signatures of self-organized criticality in an ultracold atomic gas 期刊论文
NATURE, 2020, 577 (7791) : 481-+
作者:  MacPherson, Laura;  Anokye, Juliana;  Yeung, Miriam M.;  Lam, Enid Y. N.;  Chan, Yih-Chih;  Weng, Chen-Fang;  Yeh, Paul;  Knezevic, Kathy;  Butler, Miriam S.;  Hoegl, Annabelle;  Chan, Kah-Lok;  Burr, Marian L.;  Gearing, Linden J.;  Willson, Tracy;  Liu, Joy;  Choi, Jarny;  Yang, Yuqing;  Bilardi, Rebecca A.;  Falk, Hendrik;  Nghi Nguyen;  Stupple, Paul A.;  Peat, Thomas S.;  Zhang, Ming;  De Silva, Melanie;  Carrasco-Pozo, Catalina;  Avery, Vicky M.;  Khoo, Sim;  Dolezal, Olan;  Dennis, Matthew L.;  Nuttall, Stewart;  Surjadi, Regina;  Newman, Janet;  Ren, Bin;  Leaver, David J.;  Sun, Yuxin;  Baell, Jonathan B.;  Dovey, Oliver;  Vassiliou, George S.;  Grebien, Florian;  Dawson, Sarah-Jane;  Street, Ian P.;  Monahan, Brendon J.;  Burns, Christopher J.;  Choudhary, Chunaram;  Blewitt, Marnie E.;  Voss, Anne K.;  Thomas, Tim;  Dawson, Mark A.
收藏  |  浏览/下载:24/0  |  提交时间:2020/07/03

Self-organized criticality is an elegant explanation of how complex structures emerge and persist throughout nature(1), and why such structures often exhibit similar scale-invariant properties(2-9). Although self-organized criticality is sometimes captured by simple models that feature a critical point as an attractor for the dynamics(10-15), the connection to real-world systems is exceptionally hard to test quantitatively(16-21). Here we observe three key signatures of self-organized criticality in the dynamics of a driven-dissipative gas of ultracold potassium atoms: self-organization to a stationary state that is largely independent of the initial conditions  scale-invariance of the final density characterized by a unique scaling function  and large fluctuations of the number of excited atoms (avalanches) obeying a characteristic power-law distribution. This work establishes a well-controlled platform for investigating self-organization phenomena and non-equilibrium criticality, with experimental access to the underlying microscopic details of the system.


A driven-dissipative gas of ultracold potassium atoms is used to demonstrate three key signatures of self-organized criticality, and provides a system in which the phenomenon can be experimentally tested.


  
The past and future of global river ice 期刊论文
NATURE, 2020, 577 (7788) : 69-+
作者:  Yang, Xiao;  Pavelsky, Tamlin M.;  Allen, George H.
收藏  |  浏览/下载:6/0  |  提交时间:2020/05/13

More than one-third of Earth'  s landmass is drained by rivers that seasonally freeze over. Ice transforms the hydrologic(1,2), ecologic(3,4), climatic(5) and socio-economic(6-8) functions of river corridors. Although river ice extent has been shown to be declining in many regions of the world(1), the seasonality, historical change and predicted future changes in river ice extent and duration have not yet been quantified globally. Previous studies of river ice, which suggested that declines in extent and duration could be attributed to warming temperatures(9,10), were based on data from sparse locations. Furthermore, existing projections of future ice extent are based solely on the location of the 0-degrees C isotherm11. Here, using satellite observations, we show that the global extent of river ice is declining, and we project a mean decrease in seasonal ice duration of 6.10 +/- 0.08 days per 1-degrees C increase in global mean surface air temperature. We tracked the extent of river ice using over 400,000 clear-sky Landsat images spanning 1984-2018 and observed a mean decline of 2.5 percentage points globally in the past three decades. To project future changes in river ice extent, we developed an observationally calibrated and validated model, based on temperature and season, which reduced the mean bias by 87 per cent compared with the 0-degree-Celsius isotherm approach. We applied this model to future climate projections for 2080-2100: compared with 2009-2029, the average river ice duration declines by 16.7 days under Representative Concentration Pathway (RCP) 8.5, whereas under RCP 4.5 it declines on average by 7.3 days. Our results show that, globally, river ice is measurably declining and will continue to decline linearly with projected increases in surface air temperature towards the end of this century.


  
Temporal population variability in local forest communities has mixed effects on tree species richness across a latitudinal gradient 期刊论文
ECOLOGY LETTERS, 2019
作者:  Fung, Tak;  Chisholm, Ryan A.;  Anderson-Teixeira, Kristina;  Bourg, Norm;  Brockelman, Warren Y.;  Bunyavejchewin, Sarayudh;  Chang-Yang, Chia-Hao;  Chitra-Tarak, Rutuja;  Chuyong, George;  Condit, Richard;  Dattaraja, Handanakere S.;  Davies, Stuart J.;  Ewango, Corneille E. N.;  Fewless, Gary;  Fletcher, Christine;  Gunatilleke, C. V. Savitri;  Gunatilleke, I. A. U. Nimal;  Hao, Zhanqing;  Hogan, J. Aaron;  Howe, Robert;  Hsieh, Chang-Fu;  Kenfack, David;  Lin, YiChing;  Ma, Keping;  Makana, Jean-Remy;  McMahon, Sean;  McShea, William J.;  Mi, Xiangcheng;  Nathalang, Anuttara;  Ong, Perry S.;  Parker, Geoffrey;  Rau, E-Ping;  Shue, Jessica;  Su, Sheng-Hsin;  Sukumar, Raman;  Sun, I-Fang;  Suresh, Hebbalalu S.;  Tan, Sylvester;  Thomas, Duncan;  Thompson, Jill;  Valencia, Renato;  Vallejo, Martha I.;  Wang, Xugao;  Wang, Yunquan;  Wijekoon, Pushpa;  Wolf, Amy;  Yap, Sandra;  Zimmerman, Jess
收藏  |  浏览/下载:13/0  |  提交时间:2020/02/17
Biodiversity  environmental variance  extinction risk  stochastic model  storage effect  temporal niche partitioning  
Constituents of Household Air Pollution and Risk of Lung Cancer among Never-Smoking Women in Xuanwei and Fuyuan, China 期刊论文
ENVIRONMENTAL HEALTH PERSPECTIVES, 2019, 127 (9)
作者:  Vermeulen, Roel;  Downward, George S.;  Zhang, Jinming;  Hu, Wei;  Portengen, Lutzen;  Bassig, Bryan A.;  Hammond, S. Katharine;  Wong, Jason Y. Y.;  Li, Jihua;  Reiss, Boris;  He, Jun;  Tian, Linwei;  Yang, Kaiyun;  Seow, Wei Jie;  Xu, Jun;  Anderson, Kim;  Ji, Bu-Tian;  Silverman, Debra;  Chanock, Stephen;  Huang, Yunchao;  Rothman, Nathaniel;  Lan, Qing
收藏  |  浏览/下载:12/0  |  提交时间:2019/11/27
Global Reconstruction of Naturalized River Flows at 2.94 Million Reaches 期刊论文
WATER RESOURCES RESEARCH, 2019, 55 (8) : 6499-6516
作者:  Lin, Peirong;  Pan, Ming;  Beck, Hylke E.;  Yang, Yuan;  Yamazaki, Dai;  Frasson, Renato;  David, Cedric H.;  Durand, Michael;  Pavelsky, Tamlin M.;  Allen, George H.;  Gleason, Colin J.;  Wood, Eric F.
收藏  |  浏览/下载:41/0  |  提交时间:2019/11/27
Evaluation of global simulations of aerosol particle and cloud condensation nuclei number, with implications for cloud droplet formation 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2019, 19 (13) : 8591-8617
作者:  Fanourgakis, George S.;  Kanakidou, Maria;  Nenes, Athanasios;  Bauer, Susanne E.;  Bergman, Tommi;  Carslaw, Ken S.;  Grini, Alf;  Hamilton, Douglas S.;  Johnson, Jill S.;  Karydis, Vlassis A.;  Kirkevag, Alf;  Kodros, John K.;  Lohmann, Ulrike;  Luo, Gan;  Makkonen, Risto;  Matsui, Hitoshi;  Neubauer, David;  Pierce, Jeffrey R.;  Schmale, Julia;  Stier, Philip;  Tsigaridis, Kostas;  van Noije, Twan;  Wang, Hailong;  Watson-Parris, Duncan;  Westervelt, Daniel M.;  Yang, Yang;  Yoshioka, Masaru;  Daskalakis, Nikos;  Decesari, Stefano;  Gysel-Beer, Martin;  Kalivitis, Nikos;  Liu, Xiaohong;  Mahowald, Natalie M.;  Myriokefalitakis, Stelios;  Schrodner, Roland;  Sfakianaki, Maria;  Tsimpidi, Alexandra P.;  Wu, Mingxuan;  Yu, Fangqun
收藏  |  浏览/下载:20/0  |  提交时间:2019/11/27
Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders 期刊论文
NATURE COMMUNICATIONS, 2019, 10
作者:  Saffouri, George B.;  Shields-Cutler, Robin R.;  Chen, Jun;  Yang, Yi;  Lekatz, Heather R.;  Hale, Vanessa L.;  Cho, Janice M.;  Battaglioli, Eric J.;  Bhattarai, Yogesh;  Thompson, Kevin J.;  Kalari, Krishna K.;  Behera, Gaurav;  Berry, Jonathan C.;  Peters, Stephanie A.;  Patel, Robin;  Schuetz, Audrey N.;  Faith, Jeremiah J.;  Camilleri, Michael;  Sonnenburg, Justin L.;  Farrugia, Gianrico;  Swann, Jonathan R.;  Grover, Madhusudan;  Knights, Dan;  Kashyap, Purna C.
收藏  |  浏览/下载:6/0  |  提交时间:2019/11/27
Natural, incidental, and engineered nanomaterials and their impacts on the Earth system 期刊论文
SCIENCE, 2019, 363 (6434) : 1414-+
作者:  Hochella, Michael F., Jr.;  Mogk, David W.;  Ranville, James;  Allen, Irving C.;  Luther, George W.;  Marr, Linsey C.;  McGrail, B. Peter;  Murayama, Mitsu;  Qafoku, Nikolla P.;  Rosso, Kevin M.;  Sahai, Nita;  Schroeder, Paul A.;  Vikesland, Peter;  Westerhoff, Paul;  Yang, Yi
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27
Global Relationships Between River Width, Slope, Catchment Area, Meander Wavelength, Sinuosity, and Discharge 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019, 46 (6) : 3252-3262
作者:  Frasson, Renato Prata de Moraes;  Pavelsky, Tamlin M.;  Fonstad, Mark A.;  Durand, Michael T.;  Allen, George H.;  Schumann, Guy;  Lion, Christine;  Beighley, R. Edward;  Yang, Xiao
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/26
fluvial geomorphology  hydrology  remote sensing