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Coupling delay controls synchronized oscillation in the segmentation clock 期刊论文
NATURE, 2020
作者:  Yoshioka-Kobayashi, Kumiko;  Matsumiya, Marina;  Niino, Yusuke;  Isomura, Akihiro;  Kori, Hiroshi;  Miyawaki, Atsushi;  Kageyama, Ryoichiro
收藏  |  浏览/下载:19/0  |  提交时间:2020/07/03

Individual cellular activities fluctuate but are constantly coordinated at the population level via cell-cell coupling. A notable example is the somite segmentation clock, in which the expression of clock genes (such as Hes7) oscillates in synchrony between the cells that comprise the presomitic mesoderm (PSM)(1,2). This synchronization depends on the Notch signalling pathway  inhibiting this pathway desynchronizes oscillations, leading to somite fusion(3-7). However, how Notch signalling regulates the synchronicity of HES7 oscillations is unknown. Here we establish a live-imaging system using a new fluorescent reporter (Achilles), which we fuse with HES7 to monitor synchronous oscillations in HES7 expression in the mouse PSM at a single-cell resolution. Wild-type cells can rapidly correct for phase fluctuations in HES7 oscillations, whereas the absence of the Notch modulator gene lunatic fringe (Lfng) leads to a loss of synchrony between PSM cells. Furthermore, HES7 oscillations are severely dampened in individual cells of Lfng-null PSM. However, when Lfng-null PSM cells were completely dissociated, the amplitude and periodicity of HES7 oscillations were almost normal, which suggests that LFNG is involved mostly in cell-cell coupling. Mixed cultures of control and Lfng-null PSM cells, and an optogenetic Notch signalling reporter assay, revealed that LFNG delays the signal-sending process of intercellular Notch signalling transmission. These results-together with mathematical modelling-raised the possibility that Lfng-null PSM cells shorten the coupling delay, thereby approaching a condition known as the oscillation or amplitude death of coupled oscillators(8). Indeed, a small compound that lengthens the coupling delay partially rescues the amplitude and synchrony of HES7 oscillations in Lfng-null PSM cells. Our study reveals a delay control mechanism of the oscillatory networks involved in somite segmentation, and indicates that intercellular coupling with the correct delay is essential for synchronized oscillation.


Monitoring cells of the mouse presomitic mesoderm using the Achilles reporter fused to HES7 sheds light on the mechanisms that underpin synchronous oscillations in the expression of clock genes between neighbouring cells.


  
Synchronization and Delay Between Circulation Patterns and High Streamflow Events in Germany 期刊论文
WATER RESOURCES RESEARCH, 2020, 56 (4)
作者:  Conticello, Federico Rosario;  Cioffi, Francesco;  Lall, Upmanu;  Merz, Bruno
收藏  |  浏览/下载:27/0  |  提交时间:2020/07/02
streamflow  Germany  event synchronization  circulation pattern  
A network-based comparative study of extreme tropical and frontal storm rainfall over Japan 期刊论文
CLIMATE DYNAMICS, 2019, 53: 521-532
作者:  Ozturk, Ugur;  Malik, Nishant;  Cheung, Kevin;  Marwan, Norbert;  Kurths, Juergen
收藏  |  浏览/下载:27/0  |  提交时间:2019/11/27
Extreme rainfall  Baiu  Tropical storms  Event synchronization  Complex networks  
Strong but Intermittent Spatial Covariations in Tropical Land Temperature 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019, 46 (1) : 356-364
作者:  Yang, Hui;  Piao, Shilong;  Huntingford, Chris;  Peng, Shushi;  Ciais, Philippe;  Chen, Anping;  Zhou, Guiyun;  Wang, Xuhui;  Gao, Mengdi;  Zscheischler, Jakob
收藏  |  浏览/下载:22/0  |  提交时间:2019/04/09
temperature variability  El Nino-Southern Oscillation  Pacific Decadal Oscillation  synchronization  
An event synchronization method to link heavy rainfall events and large-scale atmospheric circulation features 期刊论文
INTERNATIONAL JOURNAL OF CLIMATOLOGY, 2018, 38 (3) : 1421-1437
作者:  Conticello, Federico;  Cioffi, Francesco;  Merz, Bruno;  Lall, Upmanu
收藏  |  浏览/下载:13/0  |  提交时间:2019/04/09
flood  self-organized map  event synchronization  heavy precipitation  atmospheric river  geopotential features  
Variability modes of precipitation along a Central Mediterranean area and their relations with ENSO, NAO, and other climatic patterns 期刊论文
ATMOSPHERIC RESEARCH, 2017, 198
作者:  Kalimeris, Anastasios;  Ranieri, Ezio;  Founda, Dimitra;  Norrant, Caroline
收藏  |  浏览/下载:25/0  |  提交时间:2019/04/09
Central Mediterranean  Precipitation variability  Singular Spectrum Analysis  Wavelet analysis  Synchronization  Climatic variability patterns  
Do weak global stresses synchronize earthquakes? 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2017, 44 (16)
作者:  Bendick, R.;  Bilham, R.
收藏  |  浏览/下载:15/0  |  提交时间:2019/04/09
global earthquakes  synchronization  clustering  Earth rotation  
The historical disturbance regime of mountain Norway spruce forests in the Western Carpathians and its influence on current forest structure and composition 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2017, 388
作者:  Janda, Pavel;  Trotsiuk, Volodymyr;  Mikolas, Martin;  Bace, Radek;  Nagel, Thomas A.;  Seidl, Rupert;  Seedre, Meelis;  Morrissey, Robert C.;  Kucbel, Stanislay.;  Jaloviar, Peter;  Jasik, Marian;  Vysoky, Juraj;  Samonil, Pavel;  Cada, Vojtech;  Mrhalova, Hana;  Labusova, Jana;  Novakova, Marketa H.;  Rydval, Milos;  Mateju, Lenka;  Svoboda, Miroslav
收藏  |  浏览/下载:38/0  |  提交时间:2019/04/09
Dendroecology  Forest dynamics  Landscape ecology  Disturbance synchronization  Stand structure  Spatio-temporal pattern  
Report on activities and findings under DOE grant “Collaborative research. An Interactive Multi-Model for Consensus on Climate Change” 科技报告
来源:US Department of Energy (DOE). 出版年: 2015
作者:  Duane, Gregory S.;  Tsonis, Anastasios;  Kocarev, Ljupco;  Tribbia, Joseph
收藏  |  浏览/下载:15/0  |  提交时间:2019/04/05
supermodeling  multi-model  synchronization  
Tsonis final project report 科技报告
来源:US Department of Energy (DOE). 出版年: 2014
作者:  Duane, Greg;  Tsonis, Anastasios;  Kocarev, Ljupco;  Tribbia, Joseph
收藏  |  浏览/下载:10/0  |  提交时间:2019/04/05
Climate models  synchronization  climate oscillations