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Climate and plant community diversity in space and time 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (9) : 4464-4470
作者:  Harrison, Susan;  Spasojevic, Marko J.;  Li, Daijiang
收藏  |  浏览/下载:6/0  |  提交时间:2020/05/13
aridification  climate change  drought  functional diversity  phylogenetic diversity  
A simple dynamic model explains the diversity of island birds worldwide 期刊论文
NATURE, 2020
作者:  Li, Junxue;  Wilson, C. Blake;  Cheng, Ran;  Lohmann, Mark;  Kavand, Marzieh;  Yuan, Wei;  Aldosary, Mohammed;  Agladze, Nikolay;  Wei, Peng;  Sherwin, Mark S.;  Shi, Jing
收藏  |  浏览/下载:12/0  |  提交时间:2020/07/03

Colonization, speciation and extinction are dynamic processes that influence global patterns of species richness(1-6). Island biogeography theory predicts that the contribution of these processes to the accumulation of species diversity depends on the area and isolation of the island(7,8). Notably, there has been no robust global test of this prediction for islands where speciation cannot be ignored(9), because neither the appropriate data nor the analytical tools have been available. Here we address both deficiencies to reveal, for island birds, the empirical shape of the general relationships that determine how colonization, extinction and speciation rates co-vary with the area and isolation of islands. We compiled a global molecular phylogenetic dataset of birds on islands, based on the terrestrial avifaunas of 41 oceanic archipelagos worldwide (including 596 avian taxa), and applied a new analysis method to estimate the sensitivity of island-specific rates of colonization, speciation and extinction to island features (area and isolation). Our model predicts-with high explanatory power-several global relationships. We found a decline in colonization with isolation, a decline in extinction with area and an increase in speciation with area and isolation. Combining the theoretical foundations of island biogeography(7,8) with the temporal information contained in molecular phylogenies(10) proves a powerful approach to reveal the fundamental relationships that govern variation in biodiversity across the planet.


Using a global molecular phylogenetic dataset of birds on islands, the sensitivity of island-specific rates of colonization, speciation and extinction to island features (area and isolation) is estimated.


  
Geographically divergent evolutionary and ecological legacies shape mammal biodiversity in the global tropics and subtropics 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (3) : 1559-1565
作者:  Rowan, John;  Beaudrot, Lydia;  Franklin, Janet;  Reed, Kaye E.;  Smail, Irene E.;  Zamora, Andrew;  Kamilar, Jason M.
收藏  |  浏览/下载:9/0  |  提交时间:2020/05/13
biogeography  functional ecology  human impacts  paleoclimate legacies  phylogenetic diversity  
Giant virus diversity and host interactions through global metagenomics 期刊论文
NATURE, 2020: 1-+
作者:  Su, Jie;  Morgani, Sophie M.;  David, Charles J.;  Wang, Qiong;  Er, Ekrem Emrah;  Huang, Yun-Han;  Basnet, Harihar;  Zou, Yilong;  Shu, Weiping;  Soni, Rajesh K.;  Hendrickson, Ronald C.;  Hadjantonakis, Anna-Katerina;  Massague, Joan
收藏  |  浏览/下载:20/0  |  提交时间:2020/07/03

Analysis of metagenomics data revealed that large and giant viruses are globally widely distributed and are associated with most major eukaryotic lineages.


Our current knowledge about nucleocytoplasmic large DNA viruses (NCLDVs) is largely derived from viral isolates that are co-cultivated with protists and algae. Here we reconstructed 2,074 NCLDV genomes from sampling sites across the globe by building on the rapidly increasing amount of publicly available metagenome data. This led to an 11-fold increase in phylogenetic diversity and a parallel 10-fold expansion in functional diversity. Analysis of 58,023 major capsid proteins from large and giant viruses using metagenomic data revealed the global distribution patterns and cosmopolitan nature of these viruses. The discovered viral genomes encoded a wide range of proteins with putative roles in photosynthesis and diverse substrate transport processes, indicating that host reprogramming is probably a common strategy in the NCLDVs. Furthermore, inferences of horizontal gene transfer connected viral lineages to diverse eukaryotic hosts. We anticipate that the global diversity of NCLDVs that we describe here will establish giant viruses-which are associated with most major eukaryotic lineages-as important players in ecosystems across Earth'  s biomes.


  
Structural diversity as a predictor of ecosystem function 期刊论文
ENVIRONMENTAL RESEARCH LETTERS, 2019, 14 (11)
作者:  LaRue, Elizabeth A.;  Hardiman, Brady S.;  Elliott, Jessica M.;  Fei, Songlin
收藏  |  浏览/下载:7/0  |  提交时间:2020/02/17
3D canopy structure  biodiversity  ecosystem structure  forest productivity  phylogenetic diversity  invasion  nutrients  
Complementarity effects are strengthened by competition intensity and global environmental change in the central boreal forests of Canada 期刊论文
ECOLOGY LETTERS, 2019
作者:  Searle, Eric B.;  Chen, Han Y. H.
收藏  |  浏览/下载:12/0  |  提交时间:2019/11/27
boreal forest  competition  global change  niche complementarity  phylogenetic diversity  tree growth  
Agriculture erases climate constraints on soil nematode communities across large spatial scales 期刊论文
GLOBAL CHANGE BIOLOGY, 2019
作者:  Li, Xianping;  Zhu, Huimin;  Geisen, Stefan;  Bellard, Celine;  Hu, Feng;  Li, Huixin;  Chen, Xiaoyun;  Liu, Manqiang
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
beta diversity  biotic homogenization  environmental gradient  functional traits  land conversion  phylogenetic diversity  soil biodiversity  soil nematodes  
Evolutionary response to coexistence with close relatives: increased resistance against specialist herbivores without cost for climatic-stress resistance 期刊论文
ECOLOGY LETTERS, 2019, 22 (8) : 1285-1296
作者:  Pihain, Mickael;  Gerhold, Pille;  Ducousso, Alexis;  Prinzing, Andreas
收藏  |  浏览/下载:5/0  |  提交时间:2019/11/27
Adaptation  associational resistance  climatic-stress resistance  eco-evolutionary feedback  ecomorphology and chemical ecology  galls  ectophages and miners  phylogenetic diversity  multifunctional resistance  Sessile Oak (Quercus petraea)  temperate forests  
Greater than the sum of the parts: how the species composition in different forest strata influence ecosystem function 期刊论文
ECOLOGY LETTERS, 2019, 22 (9) : 1449-1461
作者:  Luo, Ya-Huang;  Cadotte, Marc W.;  Burgess, Kevin S.;  Liu, Jie;  Tan, Shao-Lin;  Zou, Jia-Yun;  Xu, Kun;  Li, De-Zhu;  Gao, Lian-Ming
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/27
Biodiversity-ecosystem function  different forest strata  functional traits  phylogenetic diversity  species composition  
Discriminating among forest communities based on taxonomic, phylogenetic and trait distances 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 440: 40-47
作者:  Hao, Minhui;  Ganeshaiah, Kotiganahalli Narayanagowda;  Zhang, Chunyu;  Zhao, Xiuhai;  von Gadow, Klaus
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/26
Beta diversity  Community dissimilarity  Discriminating avalanche  Taxonomic distance  Trait distance  Phylogenetic distance