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Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California 期刊论文
Science, 2020
作者:  Xianding Deng;  Wei Gu;  Scot Federman;  Louis du Plessis;  Oliver G. Pybus;  Nuno R. Faria;  Candace Wang;  Guixia Yu;  Brian Bushnell;  Chao-Yang Pan;  Hugo Guevara;  Alicia Sotomayor-Gonzalez;  Kelsey Zorn;  Allan Gopez;  Venice Servellita;  Elaine Hsu;  Steve Miller;  Trevor Bedford;  Alexander L. Greninger;  Pavitra Roychoudhury;  Lea M. Starita;  Michael Famulare;  Helen Y. Chu;  Jay Shendure;  Keith R. Jerome;  Catie Anderson;  Karthik Gangavarapu;  Mark Zeller;  Emily Spencer;  Kristian G. Andersen;  Duncan MacCannell;  Clinton R. Paden;  Yan Li;  Jing Zhang;  Suxiang Tong;  Gregory Armstrong;  Scott Morrow;  Matthew Willis;  Bela T. Matyas;  Sundari Mase;  Olivia Kasirye;  Maggie Park;  Godfred Masinde;  Curtis Chan;  Alexander T. Yu;  Shua J. Chai;  Elsa Villarino;  Brandon Bonin;  Debra A. Wadford;  Charles Y. Chiu
收藏  |  浏览/下载:15/0  |  提交时间:2020/08/09
Origin of complexity in haemoglobin evolution 期刊论文
NATURE, 2020
作者:  Cheema, Suraj S.;  Kwon, Daewoong;  Shanker, Nirmaan;  dos Reis, Roberto;  Hsu, Shang-Lin;  Xiao, Jun;  Zhang, Haigang;  Wagner, Ryan;  Datar, Adhiraj;  McCarter, Margaret R.;  Serrao, Claudy R.;  Yadav, Ajay K.;  Karbasian, Golnaz;  Hsu, Cheng-Hsiang;  Tan, Ava J.;  Wang, Li-Chen;  Thakare, Vishal;  Zhang, Xiang;  Mehta, Apurva;  Karapetrova, Evguenia;  Chopdekar, Rajesh, V;  Shafer, Padraic;  Arenholz, Elke;  Hu, Chenming;  Proksch, Roger;  Ramesh, Ramamoorthy;  Ciston, Jim;  Salahuddin, Sayeef
收藏  |  浏览/下载:50/0  |  提交时间:2020/07/03

Most proteins associate into multimeric complexes with specific architectures(1,2), which often have functional properties such as cooperative ligand binding or allosteric regulation(3). No detailed knowledge is available about how any multimer and its functions arose during evolution. Here we use ancestral protein reconstruction and biophysical assays to elucidate the origins of vertebrate haemoglobin, a heterotetramer of paralogous alpha- and beta-subunits that mediates respiratory oxygen transport and exchange by cooperatively binding oxygen with moderate affinity. We show that modern haemoglobin evolved from an ancient monomer and characterize the historical '  missing link'  through which the modern tetramer evolved-a noncooperative homodimer with high oxygen affinity that existed before the gene duplication that generated distinct alpha- and beta-subunits. Reintroducing just two post-duplication historical substitutions into the ancestral protein is sufficient to cause strong tetramerization by creating favourable contacts with more ancient residues on the opposing subunit. These surface substitutions markedly reduce oxygen affinity and even confer cooperativity, because an ancient linkage between the oxygen binding site and the multimerization interface was already an intrinsic feature of the protein'  s structure. Our findings establish that evolution can produce new complex molecular structures and functions via simple genetic mechanisms that recruit existing biophysical features into higher-level architectures.


Experimental analysis of reconstructed ancestral globins reveals that haemoglobin'  s complex tetrameric structure and oxygen-binding functions evolved by simple genetic and biophysical mechanisms.


  
HO2 Generation Above Sprite-Producing Thunderstorms Derived from Low-Noise SMILES Observation Spectra 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2020, 47 (3)
作者:  Yamada, T.;  Sato, T. O.;  Adachi, T.;  Winkler, H.;  Kuribayashi, K.;  Larsson, R.;  Yoshida, N.;  Takahashi, Y.;  Sato, M.;  Chen, A. B.;  Hsu, R. R.;  Nakano, Y.;  Fujinawa, T.;  Nara, S.;  Uchiyama, Y.;  Kasai, Y.
收藏  |  浏览/下载:11/0  |  提交时间:2020/07/02
Targeted selection of HIV-specific antibody mutations by engineering B cell maturation 期刊论文
SCIENCE, 2019, 366 (6470) : 1215-+
作者:  Saunders, Kevin O.;  Wiehe, Kevin;  Tian, Ming;  Acharya, Priyamvada;  Bradley, Todd;  Alam, S. Munir;  Go, Eden P.;  Scearce, Richard;  Sutherland, Laura;  Henderson, Rory;  Hsu, Allen L.;  Borgnia, Mario J.;  Chen, Haiyan;  Lu, Xiaozhi;  Wu, Nelson R.;  Watts, Brian;  Jiang, Chuancang;  Easterhoff, David;  Cheng, Hwei-Ling;  McGovern, Kelly;  Waddicor, Peyton;  Chapdelaine-Williams, Aimee;  Eaton, Amanda;  Zhang, Jinsong;  Rountree, Wes;  Verkoczy, Laurent;  Tomai, Mark;  Lewis, Mark G.;  Desaire, Heather R.;  Edwards, Robert J.;  Cain, Derek W.;  Bonsignori, Mattia;  Montefiori, David;  Alt, Frederick W.;  Haynes, Barton F.
收藏  |  浏览/下载:12/0  |  提交时间:2020/02/17
Close Cassini flybys of Saturn's ring moons Pan, Daphnis, Atlas, Pandora, and Epimetheus 期刊论文
SCIENCE, 2019, 364 (6445) : 1053-+
作者:  Buratti, B. J.;  Thomas, P. C.;  Roussos, E.;  Howett, C.;  Seiss, M.;  Hendrix, A. R.;  Helfenstein, P.;  Brown, R. H.;  Clark, R. N.;  Denk, T.;  Filacchione, G.;  Hoffmann, H.;  Jones, G. H.;  Khawaja, N.;  Kollmann, P.;  Krupp, N.;  Lunine, J.;  Momary, T. W.;  Paranicas, C.;  Postberg, F.;  Sachse, M.;  Spahn, F.;  Spencer, J.;  Srama, R.;  Albin, T.;  Baines, K. H.;  Ciarniello, M.;  Economou, T.;  Hsu, H. -W.;  Kempf, S.;  Krimigis, S. M.;  Mitchell, D.;  Moragas-Klostermeyer, G.;  Nicholson, P. D.;  Porco, C. C.;  Rosenberg, H.;  Simolka, J.;  Soderblom, L. A.
收藏  |  浏览/下载:14/0  |  提交时间:2019/11/27
AERONET Remotely Sensed Measurements and Retrievals of Biomass Burning Aerosol Optical Properties During the 2015 Indonesian Burning Season 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2019, 124 (8) : 4722-4740
作者:  Eck, T. F.;  Holben, B. N.;  Giles, D. M.;  Slutsker, I;  Sinyuk, A.;  Schafer, J. S.;  Smirnov, A.;  Sorokin, M.;  Reid, J. S.;  Sayer, A. M.;  Hsu, N. C.;  Shi, Y. R.;  Levy, R. C.;  Lyapustin, A.;  Rahman, Muhammad Arif;  Liew, Soo-Chin;  Cortijo, Santo V. Salinas;  Li, Tan;  Kalbermatter, Daniel;  Keong, Kwoh Leong;  Yuggotomo, Muhammad Elifant;  Aditya, Fanni;  Mohamad, Maznorizan;  Mahmud, Mastura;  Chong, Tan Kok;  Lim, Hwee-San;  Choon, Yeap Eng;  Deranadyan, Gumilang;  Kusumaningtyas, Sheila D. A.;  Aldrian, Edvin
收藏  |  浏览/下载:15/0  |  提交时间:2019/11/26
Rainfall variations in central Indo-Pacific over the past 2,700 y 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2019, 116 (35) : 17201-17206
作者:  Tan, Liangcheng;  Shen, Chuan-Chou;  Lowemark, Ludvig;  Chawchai, Sakonvan;  Edwards, R. Lawrence;  Cai, Yanjun;  Breitenbach, Sebastian F. M.;  Cheng, Hai J.;  Chou, Yu-Chen;  Duerrast, Helmut;  Partin, Judson W.;  Cai, Wenju;  Chabangborn, Akkaneewut;  Gao, Yongli;  Kwiecien, Ola;  Wu, Chung-Che;  Shi, Zhengguo;  Hsu, Huang-Hsiung;  Wohlfarth, Barbara
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27
central Indo-Pacific  rainfall  ENSO  ITCZ  stalagmite  
Laboratory Investigation of Rate of Electrostatic Dust Lofting Over Time on Airless Planetary Bodies 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2018, 45 (24) : 13206-13212
作者:  Hood, N.;  Carroll, A.;  Mike, R.;  Wang, X.;  Schwan, J.;  Hsu, H. -W.;  Horanyi, M.
收藏  |  浏览/下载:9/0  |  提交时间:2019/04/09
Dominant effect of relative tropical Atlantic warming on major hurricane occurrence 期刊论文
SCIENCE, 2018, 362 (6416) : 794-+
作者:  Murakami, H.;  Levin, E.;  Delworth, T. L.;  Gudgel, R.;  Hsu, P-C.
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27
Dust Observations by the Radio and Plasma Wave Science Instrument During Cassini's Grand Finale 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2018, 45 (19) : 10101-10109
作者:  Ye, S. -Y.;  Kurth, W. S.;  Hospodarsky, G. B.;  Persoon, A. M.;  Sulaiman, A. H.;  Gurnett, D. A.;  Morooka, M.;  Wahlund, J. -E.;  Hsu, H. -W.;  Sternovsky, Z.;  Wang, X.;  Horanyi, M.;  Seiss, M.;  Srama, R.
收藏  |  浏览/下载:12/0  |  提交时间:2019/04/09