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Causes of slowing‐down seasonal CO2 amplitude at Mauna Loa 期刊论文
Global Change Biology, 2020
作者:  Kai Wang;  Yilong Wang;  Xuhui Wang;  Yue He;  Xiangyi Li;  Ralph F. Keeling;  Philippe Ciais;  Martin Heimann;  Shushi Peng;  Fré;  ;  ric Chevallier;  Pierre Friedlingstein;  Stephen Sitch;  Wolfgang Buermann;  Vivek K. Arora;  Vanessa Haverd;  Atul K. Jain;  Etsushi Kato;  Sebastian Lienert;  Danica Lombardozzi;  Julia E. M. S. Nabel;  Benjamin Poulter;  Nicolas Vuichard;  Andy Wiltshire;  Ning Zeng;  Dan Zhu;  Shilong Piao
收藏  |  浏览/下载:13/0  |  提交时间:2020/06/22
Comparison of forest above‐ground biomass from dynamic global vegetation models with spatially explicit remotely sensed observation‐based estimates 期刊论文
Global Change Biology, 2020
作者:  Hui Yang;  Philippe Ciais;  Maurizio Santoro;  Yuanyuan Huang;  Wei Li;  Yilong Wang;  Ana Bastos;  Daniel Goll;  Almut Arneth;  Peter Anthoni;  Vivek K. Arora;  Pierre Friedlingstein;  Vanessa Harverd;  Emilie Joetzjer;  Markus Kautz;  Sebastian Lienert;  Julia E. M. S. Nabel;  Michael O'Sullivan;  Stephen Sitch;  Nicolas Vuichard;  Andy Wiltshire;  Dan Zhu
收藏  |  浏览/下载:12/0  |  提交时间:2020/05/20
Bile acid metabolites control T(H)17 and T-reg cell differentiation (vol 576, pg 148, 2019) 期刊论文
NATURE, 2020, 579 (7798) : E7-E7
作者:  Su, Jie;  Morgani, Sophie M.;  David, Charles J.;  Wang, Qiong;  Er, Ekrem Emrah;  Huang, Yun-Han;  Basnet, Harihar;  Zou, Yilong;  Shu, Weiping;  Soni, Rajesh K.;  Hendrickson, Ronald C.;  Hadjantonakis, Anna-Katerina;  Massague, Joan
收藏  |  浏览/下载:11/0  |  提交时间:2020/07/03
TGF-beta orchestrates fibrogenic and developmental EMTs via the RAS effector RREB1 期刊论文
NATURE, 2020, 577 (7791) : 566-+
作者:  Su, Jie;  Morgani, Sophie M.;  David, Charles J.;  Wang, Qiong;  Er, Ekrem Emrah;  Huang, Yun-Han;  Basnet, Harihar;  Zou, Yilong;  Shu, Weiping;  Soni, Rajesh K.;  Hendrickson, Ronald C.;  Hadjantonakis, Anna-Katerina;  Massague, Joan
收藏  |  浏览/下载:7/0  |  提交时间:2020/07/03

Epithelial-to-mesenchymal transitions (EMTs) are phenotypic plasticity processes that confer migratory and invasive properties to epithelial cells during development, wound-healing, fibrosis and cancer(1-4). EMTs are driven by SNAIL, ZEB and TWIST transcription factors(5,6) together with microRNAs that balance this regulatory network(7,8). Transforming growth factor beta (TGF-beta) is a potent inducer of developmental and fibrogenic EMTs4,9,10. Aberrant TGF-beta signalling and EMT are implicated in the pathogenesis of renal fibrosis, alcoholic liver disease, non-alcoholic steatohepatitis, pulmonary fibrosis and cancer(4,11). TGF-beta depends on RAS and mitogen-activated protein kinase (MAPK) pathway inputs for the induction of EMTs12-19. Here we show how these signals coordinately trigger EMTs and integrate them with broader pathophysiological processes. We identify RAS-responsive element binding protein 1 (RREB1), a RAS transcriptional effector(20,21), as a key partner of TGF-beta-activated SMAD transcription factors in EMT. MAPK-activated RREB1 recruits TGF-beta-activated SMAD factors to SNAIL. Context-dependent chromatin accessibility dictates the ability of RREB1 and SMAD to activate additional genes that determine the nature of the resulting EMT. In carcinoma cells, TGF-beta-SMAD and RREB1 directly drive expression of SNAIL and fibrogenic factors stimulating myofibroblasts, promoting intratumoral fibrosis and supporting tumour growth. In mouse epiblast progenitors, Nodal-SMAD and RREB1 combine to induce expression of SNAIL and mesendoderm-differentiation genes that drive gastrulation. Thus, RREB1 provides a molecular link between RAS and TGF-beta pathways for coordinated induction of developmental and fibrogenic EMTs. These insights increase our understanding of the regulation of epithelial plasticity and its pathophysiological consequences in development, fibrosis and cancer.


RAS and TGF-beta pathways regulate distinct modes of epithelial-to-mesenchymal transition via RAS-responsive element binding protein 1.


  
Giant virus diversity and host interactions through global metagenomics 期刊论文
NATURE, 2020: 1-+
作者:  Su, Jie;  Morgani, Sophie M.;  David, Charles J.;  Wang, Qiong;  Er, Ekrem Emrah;  Huang, Yun-Han;  Basnet, Harihar;  Zou, Yilong;  Shu, Weiping;  Soni, Rajesh K.;  Hendrickson, Ronald C.;  Hadjantonakis, Anna-Katerina;  Massague, Joan
收藏  |  浏览/下载:20/0  |  提交时间:2020/07/03

Analysis of metagenomics data revealed that large and giant viruses are globally widely distributed and are associated with most major eukaryotic lineages.


Our current knowledge about nucleocytoplasmic large DNA viruses (NCLDVs) is largely derived from viral isolates that are co-cultivated with protists and algae. Here we reconstructed 2,074 NCLDV genomes from sampling sites across the globe by building on the rapidly increasing amount of publicly available metagenome data. This led to an 11-fold increase in phylogenetic diversity and a parallel 10-fold expansion in functional diversity. Analysis of 58,023 major capsid proteins from large and giant viruses using metagenomic data revealed the global distribution patterns and cosmopolitan nature of these viruses. The discovered viral genomes encoded a wide range of proteins with putative roles in photosynthesis and diverse substrate transport processes, indicating that host reprogramming is probably a common strategy in the NCLDVs. Furthermore, inferences of horizontal gene transfer connected viral lineages to diverse eukaryotic hosts. We anticipate that the global diversity of NCLDVs that we describe here will establish giant viruses-which are associated with most major eukaryotic lineages-as important players in ecosystems across Earth'  s biomes.


  
Divergent response of seasonally dry tropical vegetation to climatic variations in dry and wet seasons 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (10) : 4709-4717
作者:  Wang, Xuhui;  Ciais, Philippe;  Wang, Yilong;  Zhu, Dan
收藏  |  浏览/下载:8/0  |  提交时间:2019/04/09
climate sensitivity  dry season  gross primary productivity  NDVI  tropical vegetation  wet season  
Temporal response of soil organic carbon after grassland-related land-use change 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (10) : 4731-4746
作者:  Li, Wei;  Ciais, Philippe;  Guenet, Bertrand;  Peng, Shushi;  Chang, Jinfeng;  Chaplot, Vincent;  Khudyaev, Sergey;  Peregon, Anna;  Piao, Shilong;  Wang, Yilong;  Yue, Chao
收藏  |  浏览/下载:12/0  |  提交时间:2019/04/09
land-use and land-cover change  NPP  soil carbon response curve  soil organic carbon  temporal change  
On the causes of trends in the seasonal amplitude of atmospheric CO2 期刊论文
GLOBAL CHANGE BIOLOGY, 2018, 24 (2) : 608-616
作者:  Piao, Shilong;  Liu, Zhuo;  Wang, Yilong;  Ciais, Philippe;  Yao, Yitong;  Peng, Shushi;  Chevallier, Frederic;  Friedlingstein, Pierre;  Janssens, Ivan A.;  Penuelas, Josep;  Sitch, Stephen;  Wang, Tao
收藏  |  浏览/下载:7/0  |  提交时间:2019/04/09
amplitude of atmospheric CO2  attribution  climate change  CO2 fertilization effect  detection  land-use change