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Future projections of daily haze-conducive and clear weather conditions over the North China Plain using a perturbed parameter ensemble 期刊论文
Atmospheric Chemistry and Physics, 2022
作者:  Shipra Jain, Ruth M. Doherty, David Sexton, Steven Turnock, Chaofan Li, Zixuan Jia, Zongbo Shi, and Lin Pei
收藏  |  浏览/下载:14/0  |  提交时间:2022/06/24
The age distribution of global soil carbon inferred from radiocarbon measurements 期刊论文
NATURE GEOSCIENCE, 2020
作者:  Shi, Zheng;  Allison, Steven D.;  He, Yujie;  Levine, Paul A.;  Hoyt, Alison M.;  Beem-Miller, Jeffrey;  Zhu, Qing;  Wieder, William R.;  Trumbore, Susan;  Randerson, James T.
收藏  |  浏览/下载:18/0  |  提交时间:2020/07/06
The acidity of atmospheric particles and clouds 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (8) : 4809-4888
作者:  Pye, Havala O. T.;  Nenes, Athanasios;  Alexander, Becky;  Ault, Andrew P.;  Barth, Mary C.;  Clegg, Simon L.;  Collett, Jeffrey L., Jr.;  Fahey, Kathleen M.;  Hennigan, Christopher J.;  Herrmann, Hartmut;  Kanakidou, Maria;  Kelly, James T.;  Ku, I-Ting;  McNeill, V. Faye;  Riemer, Nicole;  Schaefer, Thomas;  Shi, Guoliang;  Tilgner, Andreas;  Walker, John T.;  Wang, Tao;  Weber, Rodney;  Xing, Jia;  Zaveri, Rahul A.;  Zuend, Andreas
收藏  |  浏览/下载:15/0  |  提交时间:2020/07/02
Feedback generates a second receptive field in neurons of the visual cortex 期刊论文
NATURE, 2020
作者:  Shi, Enzheng;  Yuan, Biao;  Shiring, Stephen B.;  Gao, Yao;  Akriti;  Guo, Yunfan;  Su, Cong;  Lai, Minliang;  Yang, Peidong;  Kong, Jing;  Savoie, Brett M.;  Yu, Yi;  Dou, Letian
收藏  |  浏览/下载:44/0  |  提交时间:2020/07/03

Animals sense the environment through pathways that link sensory organs to the brain. In the visual system, these feedforward pathways define the classical feedforward receptive field (ffRF), the area in space in which visual stimuli excite a neuron(1). The visual system also uses visual context-the visual scene surrounding a stimulus-to predict the content of the stimulus(2), and accordingly, neurons have been identified that are excited by stimuli outside their ffRF(3-8). However, the mechanisms that generate excitation to stimuli outside the ffRF are unclear. Here we show that feedback projections onto excitatory neurons in the mouse primary visual cortex generate a second receptive field that is driven by stimuli outside the ffRF. The stimulation of this feedback receptive field (fbRF) elicits responses that are slower and are delayed in comparison with those resulting from the stimulation of the ffRF. These responses are preferentially reduced by anaesthesia and by silencing higher visual areas. Feedback inputs from higher visual areas have scattered receptive fields relative to their putative targets in the primary visual cortex, which enables the generation of the fbRF. Neurons with fbRFs are located in cortical layers that receive strong feedback projections and are absent in the main input layer, which is consistent with a laminar processing hierarchy. The observation that large, uniform stimuli-which cover both the fbRF and the ffRF-suppress these responses indicates that the fbRF and the ffRF are mutually antagonistic. Whereas somatostatin-expressing inhibitory neurons are driven by these large stimuli, inhibitory neurons that express parvalbumin and vasoactive intestinal peptide have mutually antagonistic fbRF and ffRF, similar to excitatory neurons. Feedback projections may therefore enable neurons to use context to estimate information that is missing from the ffRF and to report differences in stimulus features across visual space, regardless of whether excitation occurs inside or outside the ffRF. By complementing the ffRF, the fbRF that we identify here could contribute to predictive processing.


Feedback projections onto neurons of the mouse primary visual cortex generate a second excitatory receptive field that is driven by stimuli outside of the classical feedforward receptive field, with responses mediated by higher visual areas.


  
Street-scale air quality modelling for Beijing during a winter 2016 measurement campaign 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (5) : 2755-2780
作者:  Biggart, Michael;  Stocker, Jenny;  Doherty, Ruth M.;  Wild, Oliver;  Hollaway, Michael;  Carruthers, David;  Li, Jie;  Zhang, Qiang;  Wu, Ruili;  Kotthaus, Simone;  Grimmond, Sue;  Squires, Freya A.;  Lee, James;  Shi, Zongbo
收藏  |  浏览/下载:9/0  |  提交时间:2020/07/02
Live-animal imaging of native haematopoietic stem and progenitor cells 期刊论文
NATURE, 2020, 578 (7794) : 278-+
作者:  Gerstung, Moritz;  Jolly, Clemency;  Leshchiner, Ignaty;  Dentro, Stefan C.;  Gonzalez, Santiago;  Rosebrock, Daniel;  Mitchell, Thomas J.;  Rubanova, Yulia;  Anur, Pavana;  Yu, Kaixian;  Tarabichi, Maxime;  Deshwar, Amit;  Wintersinger, Jeff;  Kleinheinz, Kortine;  Vazquez-Garcia, Ignacio;  Haase, Kerstin;  Jerman, Lara;  Sengupta, Subhajit;  Macintyre, Geoff;  Malikic, Salem;  Donmez, Nilgun;  Livitz, Dimitri G.;  Cmero, Marek;  Demeulemeester, Jonas;  Schumacher, Steven;  Fan, Yu;  Yao, Xiaotong;  Lee, Juhee;  Schlesner, Matthias;  Boutros, Paul C.;  Bowtell, David D.;  Zhu, Hongtu;  Getz, Gad;  Imielinski, Marcin;  Beroukhim, Rameen;  Sahinalp, S. Cenk;  Ji, Yuan;  Peifer, Martin;  Markowetz, Florian;  Mustonen, Ville;  Yuan, Ke;  Wang, Wenyi;  Morris, Quaid D.;  Spellman, Paul T.;  Wedge, David C.;  Van Loo, Peter;  Deshwar, Amit G.;  Adams, David J.;  Campbell, Peter J.;  Cao, Shaolong;  Christie, Elizabeth L.;  Cun, Yupeng;  Dawson, Kevin J.;  Drews, Ruben M.;  Eils, Roland;  Fittall, Matthew;  Garsed, Dale W.;  Ha, Gavin;  Lee-Six, Henry;  Martincorena, Inigo;  Oesper, Layla;  Peto, Myron;  Raphael, Benjamin J.;  Salcedo, Adriana;  Shi, Ruian;  Shin, Seung Jun;  Spiro, Oliver;  Stein, Lincoln D.;  Vembu, Shankar;  Wheeler, David A.;  Yang, Tsun-Po
收藏  |  浏览/下载:15/0  |  提交时间:2020/07/03

The biology of haematopoietic stem cells (HSCs) has predominantly been studied under transplantation conditions(1,2). It has been particularly challenging to study dynamic HSC behaviour, given that the visualization of HSCs in the native niche in live animals has not, to our knowledge, been achieved. Here we describe a dual genetic strategy in mice that restricts reporter labelling to a subset of the most quiescent long-term HSCs (LT-HSCs) and that is compatible with current intravital imaging approaches in the calvarial bone marrow(3-5). We show that this subset of LT-HSCs resides close to both sinusoidal blood vessels and the endosteal surface. By contrast, multipotent progenitor cells (MPPs) show greater variation in distance from the endosteum and are more likely to be associated with transition zone vessels. LT-HSCs are not found in bone marrow niches with the deepest hypoxia and instead are found in hypoxic environments similar to those of MPPs. In vivo time-lapse imaging revealed that LT-HSCs at steady-state show limited motility. Activated LT-HSCs show heterogeneous responses, with some cells becoming highly motile and a fraction of HSCs expanding clonally within spatially restricted domains. These domains have defined characteristics, as HSC expansion is found almost exclusively in a subset of bone marrow cavities with bone-remodelling activity. By contrast, cavities with low bone-resorbing activity do not harbour expanding HSCs. These findings point to previously unknown heterogeneity within the bone marrow microenvironment, imposed by the stages of bone turnover. Our approach enables the direct visualization of HSC behaviours and dissection of heterogeneity in HSC niches.


A dual genetic strategy enables the labelling and in vivo imaging of native long-term haematopoietic stem cells in the mouse calvarial bone marrow.


  
Evaluating Errors in Gamma-Function Representations of the Raindrop Size Distribution: A Method for Determining the Optimal Parameter Set for Use in Bulk Microphysics Schemes 期刊论文
JOURNAL OF THE ATMOSPHERIC SCIENCES, 2020, 77 (2) : 513-529
作者:  Shan, Yunpeng;  Wilcox, Eric M.;  Gao, Lan;  Lin, Lin;  Mitchell, David L.;  Yin, Yan;  Zhao, Tianliang;  Zhang, Lei;  Shi, Hongrong;  Gao, Meng
收藏  |  浏览/下载:9/0  |  提交时间:2020/07/02
Cloud parameterizations  Cloud resolving models  Clouds  
Field-experiment constraints on the enhancement of the terrestrial carbon sink by CO(2 )fertilization 期刊论文
NATURE GEOSCIENCE, 2019, 12 (10) : 809-+
作者:  Liu, Yongwen;  Piao, Shilong;  Gasser, Thomas;  Ciais, Philippe;  Yang, Hui;  Wang, Han;  Keenan, Trevor F.;  Huang, Mengtian;  Wan, Shiqiang;  Song, Jian;  Wang, Kai;  Janssens, Ivan A.;  Penuelas, Josep;  Huntingford, Chris;  Wang, Xuhui;  Arain, Muhammad Altaf;  Fang, Yuanyuan;  Fisher, Joshua B.;  Huang, Maoyi;  Huntzinger, Deborah N.;  Ito, Akihiko;  Jain, Atul K.;  Mao, Jiafu;  Michalak, Anna M.;  Peng, Changhui;  Poulter, Benjamin;  Schwalm, Christopher;  Shi, Xiaoying;  Tian, Hanqin;  Wei, Yaxing;  Zeng, Ning;  Zhu, Qiuan;  Wang, Tao
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
Assessing the impact of clean air action on air quality trends in Beijing using a machine learning technique 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2019, 19 (17) : 11303-11314
作者:  Vu, Tuan V.;  Shi, Zongbo;  Cheng, Jing;  Zhang, Qiang;  He, Kebin;  Wang, Shuxiao;  Harrison, Roy M.
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27
Insight into the composition of organic compounds (>= C-6) in PM2.5 in wintertime in Beijing, China 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2019, 19 (16) : 10865-10881
作者:  Lyu, Ruihe;  Shi, Zongbo;  Alam, Mohammed Salim;  Wu, Xuefang;  Liu, Di;  Vu, Tuan V.;  Stark, Christopher;  Fu, Pingqing;  Feng, Yinchang;  Harrison, Roy M.
收藏  |  浏览/下载:16/0  |  提交时间:2019/11/27