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Large-scale mass wasting in the western Indian Ocean constrains onset of East African rifting 期刊论文
NATURE COMMUNICATIONS, 2020, 11 (1)
作者:  Maselli, Vittorio;  Iacopini, David;  Ebinger, Cynthia J.;  Tewari, Sugandha;  de Haas, Henk;  Wade, Bridget S.;  Pearson, Paul N.;  Francis, Malcom;  van Vliet, Arjan;  Richards, Bill;  Kroon, Dick
收藏  |  浏览/下载:8/0  |  提交时间:2020/07/14
Extreme climate after massive eruption of Alaska's Okmok volcano in 43 BCE and effects on the late Roman Republic and Ptolemaic Kingdom 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (27) : 15443-15449
作者:  McConnell, Joseph R.;  Sigl, Michael;  Plunkett, Gill;  Burke, Andrea;  Kim, Woon Mi;  Raible, Christoph C.;  Wilson, Andrew, I;  Manning, Joseph G.;  Ludlow, Francis;  Chellman, Nathan J.;  Innes, Helen M.;  Yang, Zhen;  Larsen, Jessica F.;  Schaefer, Janet R.;  Kipfstuhl, Sepp;  Mojtabavi, Seyedhamidreza;  Wilhelms, Frank;  Opel, Thomas;  Meyer, Hanno;  Steffensen, Jorgen Peder
收藏  |  浏览/下载:17/0  |  提交时间:2020/06/29
ice core  volcano  Okmok  Rome  climate forcing  
Evidence for a hot start and early ocean formation on Pluto 期刊论文
NATURE GEOSCIENCE, 2020, 13 (7) : 468-+
作者:  Bierson, Carver J.;  Nimmo, Francis;  Stern, S. Alan
收藏  |  浏览/下载:10/0  |  提交时间:2020/06/29
Nitrous acid (HONO) emissions under real-world driving conditions from vehicles in a UK road tunnel 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (9) : 5231-5248
作者:  Kramer, Louisa J.;  Crilley, Leigh R.;  Adams, Thomas J.;  Ball, Stephen M.;  Pope, Francis D.;  Bloss, William J.
收藏  |  浏览/下载:10/0  |  提交时间:2020/05/13
Multiple early-formed water reservoirs in the interior of Mars 期刊论文
NATURE GEOSCIENCE, 2020, 13 (4) : 260-+
作者:  Barnes, Jessica J.;  McCubbin, Francis M.;  Santos, Alison R.;  Day, James M. D.;  Boyce, Jeremy W.;  Schwenzer, Susanne P.;  Ott, Ulrich;  Franchi, Ian A.;  Messenger, Scott;  Anand, Mahesh;  Agee, Carl B.
收藏  |  浏览/下载:6/0  |  提交时间:2020/05/13
Intraplate volcanism originating from upwelling hydrous mantle transition zone 期刊论文
NATURE, 2020
作者:  Calabrese, Claudia;  Davidson, Natalie R.;  Demircioglu, Deniz;  Fonseca, Nuno A.;  He, Yao;  Kahles, Andre;  Kjong-Van Lehmann;  Liu, Fenglin;  Shiraishi, Yuichi;  Soulette, Cameron M.;  Urban, Lara;  Greger, Liliana;  Li, Siliang;  Liu, Dongbing;  Perry, Marc D.;  Xiang, Qian;  Zhang, Fan;  Zhang, Junjun;  Bailey, Peter;  Erkek, Serap;  Hoadley, Katherine A.;  Hou, Yong;  Huska, Matthew R.;  Kilpinen, Helena;  Korbel, Jan O.;  Marin, Maximillian G.;  Markowski, Julia;  Nandi, Tannistha;  Pan-Hammarstrom, Qiang;  Pedamallu, Chandra Sekhar;  Siebert, Reiner;  Stark, Stefan G.;  Su, Hong;  Tan, Patrick;  Waszak, Sebastian M.;  Yung, Christina;  Zhu, Shida;  Awadalla, Philip;  Creighton, Chad J.;  Meyerson, Matthew;  Ouellette, B. F. Francis;  Wu, Kui;  Yang, Huanming;  Brazma, Alvis;  Brooks, Angela N.;  Goke, Jonathan;  Raetsch, Gunnar;  Schwarz, Roland F.;  Stegle, Oliver;  Zhang, Zemin
收藏  |  浏览/下载:71/0  |  提交时间:2020/05/13

Most magmatism occurring on Earth is conventionally attributed to passive mantle upwelling at mid-ocean ridges, to slab devolatilization at subduction zones, or to mantle plumes. However, the widespread Cenozoic intraplate volcanism in northeast China(1-3) and the young petit-spot volcanoes(4-7) offshore of the Japan Trench cannot readily be associated with any of these mechanisms. In addition, the mantle beneath these types of volcanism is characterized by zones of anomalously low seismic velocity above and below the transition zone(8-12) (a mantle level located at depths between 410 and 660 kilometres). A comprehensive interpretation of these phenomena is lacking. Here we show that most (or possibly all) of the intraplate and petit-spot volcanism and low-velocity zones around the Japanese subduction zone can be explained by the Cenozoic interaction of the subducting Pacific slab with a hydrous mantle transition zone. Numerical modelling indicates that 0.2 to 0.3 weight per cent of water dissolved in mantle minerals that are driven out from the transition zone in response to subduction and retreat of a tectonic plate is sufficient to reproduce the observations. This suggests that a critical amount of water may have accumulated in the transition zone around this subduction zone, as well as in others of the Tethyan tectonic belt(13) that are characterized by intraplate or petit-spot volcanism and low-velocity zones in the underlying mantle.


The widespread intraplate volcanism in northeast China and the unusual '  petit-spot'  volcanoes offshore Japan could have resulted from the interaction of the subducting Pacific slab with a hydrous mantle transition zone.


  
Global gene flow releases invasive plants from environmental constraints on genetic diversity 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (8) : 4218-4227
作者:  Smith, Annabel L.;  Hodkinson, Trevor R.;  Villellas, Jesus;  Catford, Jane A.;  Csergo, Anna Maria;  Blomberg, Simone P.;  Crone, Elizabeth E.;  Ehrlen, Johan;  Garcia, Maria B.;  Laine, Anna-Liisa;  Roach, Deborah A.;  Salguero-Gomez, Roberto;  Wardle, Glenda M.;  Childs, Dylan Z.;  Elderd, Bret D.;  Finn, Alain;  Munne-Bosch, Sergi;  Baudraz, Maude E. A.;  Bodis, Judit;  Brearley, Francis Q.;  Bucharova, Anna;  Caruso, Christina M.;  Duncan, Richard P.;  Dwyerh, Johnm.;  Gooden, Ben;  Groenteman, Ronny;  Hamre, Liv Norunn;  Helm, Aveliina;  Kelly, Ruth;  Laanisto, Lauri;  Lonati, Michele;  Moore, Joslin L.;  Morales, Melanie;  Olsen, Siri Lie;  Partel, Meelis;  Petry, William K.;  Ramula, Satu;  Rasmussen, Pil U.;  Enri, Simone Ravetto;  Roeder, Anna;  Roscher, Christiane;  Saastamoinen, Marjo;  Tack, Ayco J. M.;  Topper, Joachim Paul;  Vose, Gregory E.;  Wandrag, Elizabeth M.;  Wingler, Astrid;  Buckley, Yvonne M.
收藏  |  浏览/下载:6/0  |  提交时间:2020/05/13
plant invasion  adaptation  global change  population genetics  demography  
SLC19A1 transports immunoreactive cyclic dinucleotides (vol 75, pg 372, 2019) 期刊论文
NATURE, 2020, 579 (7800) : E12-E12
作者:  Coscia, Francesca;  39;Reilly, Francis J.
收藏  |  浏览/下载:1/0  |  提交时间:2020/07/03

An amendment to this paper has been published and can be accessed via a link at the top of the paper.


  
The molecular basis for sugar import in malaria parasites 期刊论文
NATURE, 2020, 578 (7794) : 321-+
作者:  Zhao, Peishen;  Liang, Yi-Lynn;  Belousoff, Matthew J.;  Deganutti, Giuseppe;  Fletcher, Madeleine M.;  Willard, Francis S.;  Bell, Michael G.;  Christe, Michael E.;  Sloop, Kyle W.;  Inoue, Asuka;  Truong, Tin T.;  Clydesdale, Lachlan;  Furness, Sebastian G. B.;  Christopoulos, Arthur;  Wang, Ming-Wei;  Miller, Laurence J.;  Reynolds, Christopher A.;  Danev, Radostin;  Sexton, Patrick M.;  Wootten, Denise
收藏  |  浏览/下载:18/0  |  提交时间:2020/07/03

Elucidating the mechanism of sugar import requires a molecular understanding of how transporters couple sugar binding and gating events. Whereas mammalian glucose transporters (GLUTs) are specialists(1), the hexose transporter from the malaria parasite Plasmodium falciparum PfHT1(2,3) has acquired the ability to transport both glucose and fructose sugars as efficiently as the dedicated glucose (GLUT3) and fructose (GLUT5) transporters. Here, to establish the molecular basis of sugar promiscuity in malaria parasites, we determined the crystal structure of PfHT1 in complex with d-glucose at a resolution of 3.6 angstrom. We found that the sugar-binding site in PfHT1 is very similar to those of the distantly related GLUT3 and GLUT5 structures(4,5). Nevertheless, engineered PfHT1 mutations made to match GLUT sugar-binding sites did not shift sugar preferences. The extracellular substrate-gating helix TM7b in PfHT1 was positioned in a fully occluded conformation, providing a unique glimpse into how sugar binding and gating are coupled. We determined that polar contacts between TM7b and TM1 (located about 15 angstrom from d-glucose) are just as critical for transport as the residues that directly coordinate d-glucose, which demonstrates a strong allosteric coupling between sugar binding and gating. We conclude that PfHT1 has achieved substrate promiscuity not by modifying its sugar-binding site, but instead by evolving substrate-gating dynamics.


Crystal structure of the Plasmodium falciparum hexose transporter PfHT1 reveals the molecular basis of its ability to transport multiple types of sugar as efficiently as the dedicated mammalian glucose and fructose transporters.


  
Processive extrusion of polypeptide loops by a Hsp100 disaggregase 期刊论文
NATURE, 2020, 578 (7794) : 317-+
作者:  Zhao, Peishen;  Liang, Yi-Lynn;  Belousoff, Matthew J.;  Deganutti, Giuseppe;  Fletcher, Madeleine M.;  Willard, Francis S.;  Bell, Michael G.;  Christe, Michael E.;  Sloop, Kyle W.;  Inoue, Asuka;  Truong, Tin T.;  Clydesdale, Lachlan;  Furness, Sebastian G. B.;  Christopoulos, Arthur;  Wang, Ming-Wei;  Miller, Laurence J.;  Reynolds, Christopher A.;  Danev, Radostin;  Sexton, Patrick M.;  Wootten, Denise
收藏  |  浏览/下载:17/0  |  提交时间:2020/07/03

The ability to reverse protein aggregation is vital to cells(1,2). Hsp100 disaggregases such as ClpB and Hsp104 are proposed to catalyse this reaction by translocating polypeptide loops through their central pore(3,4). This model of disaggregation is appealing, as it could explain how polypeptides entangled within aggregates can be extracted and subsequently refolded with the assistance of Hsp70(4,5). However, the model is also controversial, as the necessary motor activity has not been identified(6-8) and recent findings indicate non-processive mechanisms such as entropic pulling or Brownian ratcheting(9,10). How loop formation would be accomplished is also obscure. Indeed, cryo-electron microscopy studies consistently show single polypeptide strands in the Hsp100 pore(11,12). Here, by following individual ClpB-substrate complexes in real time, we unambiguously demonstrate processive translocation of looped polypeptides. We integrate optical tweezers with fluorescent-particle tracking to show that ClpB translocates both arms of the loop simultaneously and switches to single-arm translocation when encountering obstacles. ClpB is notably powerful and rapid  it exerts forces of more than 50 pN at speeds of more than 500 residues per second in bursts of up to 28 residues. Remarkably, substrates refold while exiting the pore, analogous to co-translational folding. Our findings have implications for protein-processing phenomena including ubiquitin-mediated remodelling by Cdc48 (or its mammalian orthologue p97)(13) and degradation by the 26S proteasome(14).


A combination of optical tweezers and fluorescent-particle tracking is used to dissect the dynamics of the Hsp100 disaggregase ClpB, and show that the processive extrusion of polypeptide loops is the mechanistic basis of its activity.