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Abundant nitrite-oxidizing metalloenzymes in the mesopelagic zone of the tropical Pacific Ocean 期刊论文
NATURE GEOSCIENCE, 2020, 13 (5)
作者:  Saito, Mak A.;  McIlvin, Matthew R.;  Moran, Dawn M.;  Santoro, Alyson E.;  Dupont, Chris L.;  Rafter, Patrick A.;  Saunders, Jaclyn K.;  Kaul, Drishti;  Lamborg, Carl H.;  Westley, Marian;  Valois, Frederica;  Waterbury, John B.
收藏  |  浏览/下载:8/0  |  提交时间:2020/05/13
On the Ubiquity of Magnetic Reconnection Inside Flux Transfer Event-Like Structures at the Earth's Magnetopause 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2020, 47 (6)
作者:  Fargette, N.;  Lavraud, B.;  Oieroset, M.;  Phan, T. D.;  Toledo-Redondo, S.;  Kieokaew, R.;  Jacquey, C.;  Fuselier, S. A.;  Trattner, K. J.;  Petrinec, S.;  Hasegawa, H.;  Garnier, P.;  Genot, V;  Lenouvel, Q.;  Fadanelli, S.;  Penou, E.;  Sauvaud, J. A.;  Avanov, D. L. A.;  Burch, J.;  Chandler, M. O.;  Coffey, V. N.;  Dorelli, J.;  Eastwood, J. P.;  Farrugia, C. J.;  Gershman, D. J.;  Giles, B. L.;  Grigorenko, E.;  Moore, T. E.;  Paterson, W. R.;  Pollock, C.;  Saito, Y.;  Schiff, C.;  Smith, S. E.
收藏  |  浏览/下载:13/0  |  提交时间:2020/07/02
Isolation of an archaeon at the prokaryote-eukaryote interface 期刊论文
NATURE, 2020, 577 (7791) : 519-+
作者:  Imachi, Hiroyuki;  Nobu, Masaru K.;  Nakahara, Nozomi;  Morono, Yuki;  Ogawara, Miyuki;  Takaki, Yoshihiro;  Takano, Yoshinori;  Uematsu, Katsuyuki;  Ikuta, Tetsuro;  Ito, Motoo;  Matsui, Yohei;  Miyazaki, Masayuki;  Murata, Kazuyoshi;  Saito, Yumi;  Sakai, Sanae;  Song, Chihong;  Tasumi, Eiji;  Yamanaka, Yuko;  Yamaguchi, Takashi;  Kamagata, Yoichi;  Tamaki, Hideyuki;  Takai, Ken
收藏  |  浏览/下载:9/0  |  提交时间:2020/07/03

The origin of eukaryotes remains unclear(1-4). Current data suggest that eukaryotes may have emerged from an archaeal lineage known as '  Asgard'  archaea(5,6). Despite the eukaryote-like genomic features that are found in these archaea, the evolutionary transition from archaea to eukaryotes remains unclear, owing to the lack of cultured representatives and corresponding physiological insights. Here we report the decade-long isolation of an Asgard archaeon related to Lokiarchaeota from deep marine sediment. The archaeon-'  Candidatus Prometheoarchaeum syntrophicum'  strain MK-D1-is an anaerobic, extremely slow-growing, small coccus (around 550 nm in diameter) that degrades amino acids through syntrophy. Although eukaryote-like intracellular complexes have been proposed for Asgard archaea(6), the isolate has no visible organelle-like structure. Instead, Ca. P. syntrophicum is morphologically complex and has unique protrusions that are long and often branching. On the basis of the available data obtained from cultivation and genomics, and reasoned interpretations of the existing literature, we propose a hypothetical model for eukaryogenesis, termed the entangle-engulf-endogenize (also known as E-3) model.


Isolation and characterization of an archaeon that is most closely related to eukaryotes reveals insights into how eukaryotes may have evolved from prokaryotes.


  
Phase separation organizes the site of autophagosome formation 期刊论文
NATURE, 2020, 578 (7794) : 301-+
作者:  Imachi, Hiroyuki;  Nobu, Masaru K.;  Nakahara, Nozomi;  Morono, Yuki;  Ogawara, Miyuki;  Takaki, Yoshihiro;  Takano, Yoshinori;  Uematsu, Katsuyuki;  Ikuta, Tetsuro;  Ito, Motoo;  Matsui, Yohei;  Miyazaki, Masayuki;  Murata, Kazuyoshi;  Saito, Yumi;  Sakai, Sanae;  Song, Chihong;  Tasumi, Eiji;  Yamanaka, Yuko;  Yamaguchi, Takashi;  Kamagata, Yoichi;  Tamaki, Hideyuki;  Takai, Ken
收藏  |  浏览/下载:30/0  |  提交时间:2020/07/03

The pre-autophagosomal structure in yeast is a liquid-like condensate of Atg proteins whose phase separation may have a critical, active role in autophagy.


Many biomolecules undergo liquid-liquid phase separation to form liquid-like condensates that mediate diverse cellular functions(1,2). Autophagy is able to degrade such condensates using autophagosomes-double-membrane structures that are synthesized de novo at the pre-autophagosomal structure (PAS) in yeast(3-5). Whereas Atg proteins that associate with the PAS have been characterized, the physicochemical and functional properties of the PAS remain unclear owing to its small size and fragility. Here we show that the PAS is in fact a liquid-like condensate of Atg proteins. The autophagy-initiating Atg1 complex undergoes phase separation to form liquid droplets in vitro, and point mutations or phosphorylation that inhibit phase separation impair PAS formation in vivo. In vitro experiments show that Atg1-complex droplets can be tethered to membranes via specific protein-protein interactions, explaining the vacuolar membrane localization of the PAS in vivo. We propose that phase separation has a critical, active role in autophagy, whereby it organizes the autophagy machinery at the PAS.


  
Statistical Study on Electron and Ion Temperatures in the Near-Earth Reconnection and Magnetic Pileup Regions 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019
作者:  Watanabe, K.;  Keika, K.;  Hoshino, M.;  Kitamura, N.;  Saito, Y.;  Giles, B. L.;  Paterson, W. R.
收藏  |  浏览/下载:12/0  |  提交时间:2020/02/17
The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight 期刊论文
SCIENCE, 2019, 364 (6436) : 144-+
作者:  Garrett-Bakelman, Francine E.;  Darshi, Manjula;  Green, Stefan J.;  Gur, Ruben C.;  Lin, Ling;  Macias, Brandon R.;  McKenna, Miles J.;  Meydan, Cem;  Mishra, Tejaswini;  Nasrini, Jad;  Piening, Brian D.;  Rizzardi, Lindsay F.;  Sharma, Kumar;  Siamwala, Jamila H.;  Taylor, Lynn;  Vitaterna, Martha Hotz;  Afkarian, Maryam;  Afshinnekoo, Ebrahim;  Ahadi, Sara;  Ambati, Aditya;  Arya, Maneesh;  Bezdan, Daniela;  Callahan, Colin M.;  Chen, Songjie;  Choi, Augustine M. K.;  Chlipala, George E.;  Contrepois, Kevin;  Covington, Marisa;  Crucian, Brian E.;  De Vivo, Immaculata;  Dinges, David F.;  Ebert, Douglas J.;  Feinberg, Jason I.;  Gandara, Jorge A.;  George, Kerry A.;  Goutsias, John;  Grills, George S.;  Hargens, Alan R.;  Heer, Martina;  Hillary, Ryan P.;  Hoofnagle, Andrew N.;  Hook, Vivian Y. H.;  Jenkinson, Garrett;  Jiang, Peng;  Keshavarzian, Ali;  Laurie, Steven S.;  Lee-McMullen, Brittany;  Lumpkins, Sarah B.;  MacKay, Matthew;  Maienschein-Cline, Mark G.;  Melnick, Ari M.;  Moore, Tyler M.;  Nakahira, Kiichi;  Patel, Hemal H.;  Pietrzyk, Robert;  Rao, Varsha;  Saito, Rintaro;  Salins, Denis N.;  Schilling, Jan M.;  Sears, Dorothy D.;  Sheridan, Caroline K.;  Stenger, Michael B.;  Tryggvadottir, Rakel;  Urban, Alexander E.;  Vaisar, Tomas;  Van Espen, Benjamin;  Zhang, Jing;  Ziegler, Michael G.;  Zwart, Sara R.;  Charles, John B.;  Kundrot, Craig E.;  Scott, Graham B. I.;  Bailey, Susan M.;  Basner, Mathias;  Feinberg, Andrew P.;  Lee, Stuart M. C.;  Mason, Christopher E.;  Mignot, Emmanuel;  Rana, Brinda K.;  Smith, Scott M.;  Snyder, Michael P.;  Turek, Fred W.
收藏  |  浏览/下载:38/0  |  提交时间:2019/11/27
Electron-scale dynamics of the diffusion region during symmetric magnetic reconnection in space 期刊论文
SCIENCE, 2018, 362 (6421) : 1391-+
作者:  Torbert, R. B.;  Burch, J. L.;  Phan, T. D.;  Hesse, M.;  Argall, M. R.;  Shuster, J.;  Ergun, R. E.;  Alm, L.;  Nakamura, R.;  Genestreti, K. J.;  Gershman, D. J.;  Paterson, W. R.;  Turner, D. L.;  Cohen, I.;  Giles, B. L.;  Pollock, C. J.;  Wang, S.;  Chen, L. -J.;  Stawarz, J. E.;  Eastwood, J. P.;  Hwang, K. J.;  Farrugia, C.;  Dors, I.;  Vaith, H.;  Mouikis, C.;  Ardakani, A.;  Mauk, B. H.;  Fuselier, S. A.;  Russell, C. T.;  Strangeway, R. J.;  Moore, T. E.;  Drake, J. F.;  Shay, M. A.;  Khotyaintsev, Yuri V.;  Lindqvist, P. -A.;  Baumjohann, W.;  Wilder, F. D.;  Ahmadi, N.;  Dorelli, J. C.;  Avanov, L. A.;  Oka, M.;  Baker, D. N.;  Fennell, J. F.;  Blake, J. B.;  Jaynes, A. N.;  Le Contel, O.;  Petrinec, S. M.;  Lavraud, B.;  Saito, Y.
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
Atmospheric Modeling of Cs-137 Plumes From the Fukushima Daiichi Nuclear Power Plant-Evaluation of the Model Intercomparison Data of the Science Council of Japan 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2018, 123 (14) : 7754-7770
作者:  Kitayama, K.;  Morino, Y.;  Takigawa, M.;  Nakajima, T.;  Hayami, H.;  Nagai, H.;  Terada, H.;  Saito, K.;  Shimbori, T.;  Kajino, M.;  Sekiyama, T. T.;  Didier, D.;  Mathieu, A.;  Quelo, D.;  Ohara, T.;  Tsuruta, H.;  Dura, Y.;  Ebihara, M.;  Moriguchi, Y.;  Shibata, T.
收藏  |  浏览/下载:4/0  |  提交时间:2019/04/09
Gamma Ray Showers Observed at Ground Level in Coincidence With Downward Lightning Leaders 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2018, 123 (13) : 6864-6879
作者:  Abbasi, R. U.;  Abu-Zayyad, T.;  Allen, M.;  Barcikowski, E.;  Belz, J. W.;  Bergman, D. R.;  Blake, S. A.;  Byrne, M.;  Cady, R.;  Cheon, B. G.;  Chiba, J.;  Chikawa, M.;  Fujii, T.;  Fukushima, M.;  Furlich, G.;  Goto, T.;  Hanlon, W.;  Hayashi, Y.;  Hayashida, N.;  Hibino, K.;  Honda, K.;  Ikeda, D.;  Inoue, N.;  Ishii, T.;  Ito, H.;  Ivanov, D.;  Jeong, S.;  Jui, C. C. H.;  Kadota, K.;  Kakimoto, F.;  Kalashev, O.;  Kasahara, K.;  Kawai, H.;  Kawakami, S.;  Kawata, K.;  Kido, E.;  Kim, H. B.;  Kim, J. H.;  Kim, J. H.;  Kishigami, S. S.;  Krehbiel, P. R.;  Kuzmin, V.;  Kwon, Y. J.;  Lan, J.;  LeVon, R.;  Lundquist, J. P.;  Machida, K.;  Martens, K.;  Matuyama, T.;  Matthews, J. N.;  Minamino, M.;  Mukai, K.;  Myers, I.;  Nagataki, S.;  Nakamura, R.;  Nakamura, T.;  Nonaka, T.;  Ogio, S.;  Ohnishi, M.;  Ohoka, H.;  Oki, K.;  Okuda, T.;  Ono, M.;  Onogi, R.;  Oshima, A.;  Ozawa, S.;  Park, I. H.;  Pshirkov, M. S.;  Remington, J.;  Rison, W.;  Rodeheffer, D.;  Rodriguez, D. C.;  Rubtsov, G.;  Ryu, D.;  Sagawa, H.;  Saito, K.;  Sakaki, N.;  Sakurai, N.;  Seki, T.;  Sekino, K.;  Shah, P. D.;  Shibata, F.;  Shibata, T.;  Shimodaira, H.;  Shin, B. K.;  Shin, H. S.;  Smith, J. D.;  Sokolsky, P.;  Springer, R. W.;  Stokes, B. T.;  Stroman, T. A.;  Takai, H.;  Takeda, M.;  Takeishi, R.;  Taketa, A.;  Takita, M.;  Tameda, Y.;  Tanaka, H.;  Tanaka, K.;  Tanaka, M.;  Thomas, R. J.;  Thomas, S. B.;  Thomson, G. B.;  Tinyakov, P.;  Tkachev, I.;  Tokuno, H.;  Tomida, T.;  Troitsky, S.;  Tsunesada, Y.;  Uchihori, Y.;  Udo, S.;  Urban, F.;  Vasiloff, G.;  Wong, T.;  Yamamoto, M.;  Yamane, R.;  Yamaoka, H.;  Yamazaki, K.;  Yang, J.;  Yashiro, K.;  Yoneda, Y.;  Yoshida, S.;  Yoshii, H.;  Zundel, Z.
收藏  |  浏览/下载:10/0  |  提交时间:2019/04/09
A Statistical Study of Slow-Mode Shocks Observed by MMS in the Dayside Magnetopause 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2018, 45 (10) : 4675-4684
作者:  Walia, N. K.;  Seki, K.;  Hoshino, M.;  Amano, T.;  Kitamura, N.;  Saito, Y.;  Yokota, S.;  Pollock, C. J.;  Giles, B. L.;  Moore, T. E.;  Torbert, R. B.;  Russell, C. T.;  Burch, J. L.
收藏  |  浏览/下载:10/0  |  提交时间:2019/04/09
magnetic reconnection  dayside magnetopause  slow-mode shocks  MMS