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Observations of Greenhouse Gas Changes Across Summer Frontal Boundaries in the Eastern United States 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2020, 125 (5)
作者:  Pal, Sandip;  Davis, Kenneth J.;  Lauvaux, Thomas;  Browell, Edward, V;  Gaudet, Brian J.;  Stauffer, David R.;  Obland, Michael D.;  Choi, Yonghoon;  DiGangi, Josh P.;  Feng, Sha;  Lin, Bing;  Miles, Natasha L.;  Pauly, Rebecca M.;  Richardson, Scott J.;  Zhang, Fuqing
收藏  |  浏览/下载:6/0  |  提交时间:2020/07/02
atmospheric boundary layer  airborne atmospheric measurements  cold front  free troposphere  greenhouse gases  midlatitude cyclone  
Neuronal programming by microbiota regulates intestinal physiology 期刊论文
NATURE, 2020, 578 (7794) : 284-+
作者:  Li, Yilong;  Roberts, Nicola D.;  Wala, Jeremiah A.;  Shapira, Ofer;  Schumacher, Steven E.;  Kumar, Kiran;  Khurana, Ekta;  Waszak, Sebastian;  Korbel, Jan O.;  Haber, James E.;  Imielinski, Marcin;  Weischenfeldt, Joachim;  Beroukhim, Rameen;  Campbell, Peter J.;  Akdemir, Kadir C.;  Alvarez, Eva G.;  Baez-Ortega, Adrian;  Boutros, Paul C.;  Bowtell, David D. L.;  Brors, Benedikt;  Burns, Kathleen H.;  Chan, Kin;  Chen, Ken;  Cortes-Ciriano, Isidro;  Dueso-Barroso, Ana;  Dunford, Andrew J.;  Edwards, Paul A.;  Estivill, Xavier;  Etemadmoghadam, Dariush;  Feuerbach, Lars;  Fink, J. Lynn;  Frenkel-Morgenstern, Milana;  Garsed, Dale W.;  Gerstein, Mark;  Gordenin, Dmitry A.;  Haan, David;  Hess, Julian M.;  Hutter, Barbara;  Jones, David T. W.;  Ju, Young Seok;  Kazanov, Marat D.;  Klimczak, Leszek J.;  Koh, Youngil;  Lee, Eunjung Alice;  Lee, Jake June-Koo;  Lynch, Andy G.;  Macintyre, Geoff;  Markowetz, Florian;  Martincorena, Inigo;  Martinez-Fundichely, Alexander;  Meyerson, Matthew;  Miyano, Satoru;  Nakagawa, Hidewaki;  Navarro, Fabio C. P.;  Ossowski, Stephan;  Park, Peter J.;  Pearson, John, V;  Puiggros, Montserrat;  Rippe, Karsten;  Roberts, Steven A.;  Rodriguez-Martin, Bernardo;  Scully, Ralph;  Shackleton, Mark;  Sidiropoulos, Nikos;  Sieverling, Lina;  Stewart, Chip;  Torrents, David;  Tubio, Jose M. C.;  Villasante, Izar;  Waddell, Nicola;  Yang, Lixing;  Yao, Xiaotong;  Yoon, Sung-Soo;  Zamora, Jorge;  Zhang, Cheng-Zhong
收藏  |  浏览/下载:38/0  |  提交时间:2020/07/03

Neural control of the function of visceral organs is essential for homeostasis and health. Intestinal peristalsis is critical for digestive physiology and host defence, and is often dysregulated in gastrointestinal disorders(1). Luminal factors, such as diet and microbiota, regulate neurogenic programs of gut motility(2-5), but the underlying molecular mechanisms remain unclear. Here we show that the transcription factor aryl hydrocarbon receptor (AHR) functions as a biosensor in intestinal neural circuits, linking their functional output to the microbial environment of the gut lumen. Using nuclear RNA sequencing of mouse enteric neurons that represent distinct intestinal segments and microbiota states, we demonstrate that the intrinsic neural networks of the colon exhibit unique transcriptional profiles that are controlled by the combined effects of host genetic programs and microbial colonization. Microbiota-induced expression of AHR in neurons of the distal gastrointestinal tract enables these neurons to respond to the luminal environment and to induce expression of neuron-specific effector mechanisms. Neuron-specific deletion of Ahr, or constitutive overexpression of its negative feedback regulator CYP1A1, results in reduced peristaltic activity of the colon, similar to that observed in microbiota-depleted mice. Finally, expression of Ahr in the enteric neurons of mice treated with antibiotics partially restores intestinal motility. Together, our experiments identify AHR signalling in enteric neurons as a regulatory node that integrates the luminal environment with the physiological output of intestinal neural circuits to maintain gut homeostasis and health.


In a mouse model, aryl hydrocarbon receptor signalling in enteric neurons is revealed as a mechanism that helps to maintain gut homeostasis by integrating the luminal environment with the physiology of intestinal neural circuits.


  
Investigation of the fine structure of antihydrogen 期刊论文
NATURE, 2020, 578 (7795) : 375-+
作者:  Zhang, Bing;  Ma, Sai;  Rachmin, Inbal;  He, Megan;  Baral, Pankaj;  Choi, Sekyu;  Goncalves, William A.;  Shwartz, Yulia;  Fast, Eva M.;  Su, Yiqun;  Zon, Leonard I.;  Regev, Aviv;  Buenrostro, Jason D.;  Cunha, Thiago M.;  Chiu, Isaac M.;  Fisher, David E.;  Hsu, Ya-Chieh
收藏  |  浏览/下载:25/0  |  提交时间:2020/07/03

At the historic Shelter Island Conference on the Foundations of Quantum Mechanics in 1947, Willis Lamb reported an unexpected feature in the fine structure of atomic hydrogen: a separation of the 2S(1/2) and 2P(1/2) states(1). The observation of this separation, now known as the Lamb shift, marked an important event in the evolution of modern physics, inspiring others to develop the theory of quantum electrodynamics(2-5). Quantum electrodynamics also describes antimatter, but it has only recently become possible to synthesize and trap atomic antimatter to probe its structure. Mirroring the historical development of quantum atomic physics in the twentieth century, modern measurements on anti-atoms represent a unique approach for testing quantum electrodynamics and the foundational symmetries of the standard model. Here we report measurements of the fine structure in the n = 2 states of antihydrogen, the antimatter counterpart of the hydrogen atom. Using optical excitation of the 1S-2P Lyman-alpha transitions in antihydrogen(6), we determine their frequencies in a magnetic field of 1 tesla to a precision of 16 parts per billion. Assuming the standard Zeeman and hyperfine interactions, we infer the zero-field fine-structure splitting (2P(1/2)-2P(3/2)) in antihydrogen. The resulting value is consistent with the predictions of quantum electrodynamics to a precision of 2 per cent. Using our previously measured value of the 1S-2S transition frequency(6,7), we find that the classic Lamb shift in antihydrogen (2S(1/2)-2P(1/2) splitting at zero field) is consistent with theory at a level of 11 per cent. Our observations represent an important step towards precision measurements of the fine structure and the Lamb shift in the antihydrogen spectrum as tests of the charge-parity-time symmetry(8) and towards the determination of other fundamental quantities, such as the antiproton charge radius(9,10), in this antimatter system.


Precision measurements of the 1S-2P transition in antihydrogen that take into account the standard Zeeman and hyperfine effects confirm the predictions of quantum electrodynamics.


  
Single-cell and spatial transcriptomics reveal somitogenesis in gastruloids 期刊论文
NATURE, 2020
作者:  Nixon, Christopher C.;  Mavigner, Maud;  Sampey, Gavin C.;  Brooks, Alyssa D.;  Spagnuolo, Rae Ann;  Irlbeck, David M.;  Mattingly, Cameron;  Ho, Phong T.;  Schoof, Nils;  Cammon, Corinne G.;  Tharp, Greg K.;  Kanke, Matthew;  Wang, Zhang;  Cleary, Rachel A.;  Upadhyay, Amit A.;  De, Chandrav;  Wills, Saintedym R.;  Falcinelli, Shane D.;  Galardi, Cristin;  Walum, Hasse;  Schramm, Nathaniel J.;  Deutsch, Jennifer;  Lifson, Jeffrey D.;  Fennessey, Christine M.;  Keele, Brandon F.;  Jean, Sherrie;  Maguire, Sean;  Liao, Baolin;  Browne, Edward P.;  Ferris, Robert G.;  Brehm, Jessica H.;  Favre, David;  Vanderford, Thomas H.;  Bosinger, Steven E.;  Jones, Corbin D.;  Routy, Jean-Pierre;  Archin, Nancie M.;  Margolis, David M.;  Wahl, Angela;  Dunham, Richard M.;  Silvestri, Guido;  Chahroudi, Ann;  Garcia, J. Victor
收藏  |  浏览/下载:34/0  |  提交时间:2020/07/03

Single-cell RNA sequencing and spatial transcriptomics reveal that the somitogenesis clock is active in mouse gastruloids, which can be induced to generate somites with the correct rostral-caudal patterning.


Gastruloids are three-dimensional aggregates of embryonic stem cells that display key features of mammalian development after implantation, including germ-layer specification and axial organization(1-3). To date, the expression pattern of only a small number of genes in gastruloids has been explored with microscopy, and the extent to which genome-wide expression patterns in gastruloids mimic those in embryos is unclear. Here we compare mouse gastruloids with mouse embryos using single-cell RNA sequencing and spatial transcriptomics. We identify various embryonic cell types that were not previously known to be present in gastruloids, and show that key regulators of somitogenesis are expressed similarly between embryos and gastruloids. Using live imaging, we show that the somitogenesis clock is active in gastruloids and has dynamics that resemble those in vivo. Because gastruloids can be grown in large quantities, we performed a small screen that revealed how reduced FGF signalling induces a short-tail phenotype in embryos. Finally, we demonstrate that embedding in Matrigel induces gastruloids to generate somites with the correct rostral-caudal patterning, which appear sequentially in an anterior-to-posterior direction over time. This study thus shows the power of gastruloids as a model system for exploring development and somitogenesis in vitro in a high-throughput manner.


  
Reversible epitaxial electrodeposition of metals in battery anodes 期刊论文
SCIENCE, 2019, 366 (6465) : 645-+
作者:  Zheng, Jingxu;  Zhao, Qing;  Tang, Tian;  Yin, Jiefu;  Quilty, Calvin D.;  Renderos, Genesis D.;  Liu, Xiaotun;  Deng, Yue;  Wang, Lei;  Bock, David C.;  Jaye, Cherno;  Zhang, Duhan;  Takeuchi, Esther S.;  Takeuchi, Kenneth J.;  Marschilok, Amy C.;  Archer, Lynden A.
收藏  |  浏览/下载:18/0  |  提交时间:2020/02/17
Large loss of CO2 in winter observed across the northern permafrost region 期刊论文
NATURE CLIMATE CHANGE, 2019, 9 (11) : 852-+
作者:  Natali, Susan M.;  Watts, Jennifer D.;  Rogers, Brendan M.;  Potter, Stefano;  Ludwig, Sarah M.;  Selbmann, Anne-Katrin;  Sullivan, Patrick F.;  Abbott, Benjamin W.;  Arndt, Kyle A.;  Birch, Leah;  Bjorkman, Mats P.;  Bloom, A. Anthony;  Celis, Gerardo;  Christensen, Torben R.;  Christiansen, Casper T.;  Commane, Roisin;  Cooper, Elisabeth J.;  Crill, Patrick;  Czimczik, Claudia;  Davydov, Sergey;  Du, Jinyang;  Egan, Jocelyn E.;  Elberling, Bo;  Euskirchen, Eugenie S.;  Friborg, Thomas;  Genet, Helene;  Goeckede, Mathias;  Goodrich, Jordan P.;  Grogan, Paul;  Helbig, Manuel;  Jafarov, Elchin E.;  Jastrow, Julie D.;  Kalhori, Aram A. M.;  Kim, Yongwon;  Kimball, John S.;  Kutzbach, Lars;  Lara, Mark J.;  Larsen, Klaus S.;  Lee, Bang-Yong;  Liu, Zhihua;  Loranty, Michael M.;  Lund, Magnus;  Lupascu, Massimo;  Madani, Nima;  Malhotra, Avni;  Matamala, Roser;  McFarland, Jack;  McGuire, A. David;  Michelsen, Anders;  Minions, Christina;  Oechel, Walter C.;  Olefeldt, David;  Parmentier, Frans-Jan W.;  Pirk, Norbert;  Poulter, Ben;  Quinton, William;  Rezanezhad, Fereidoun;  Risk, David;  Sachs, Torsten;  Schaefer, Kevin;  Schmidt, Niels M.;  Schuur, Edward A. G.;  Semenchuk, Philipp R.;  Shaver, Gaius;  Sonnentag, Oliver;  Starr, Gregory;  Treat, Claire C.;  Waldrop, Mark P.;  Wang, Yihui;  Welker, Jeffrey;  Wille, Christian;  Xu, Xiaofeng;  Zhang, Zhen;  Zhuang, Qianlai;  Zona, Donatella
收藏  |  浏览/下载:18/0  |  提交时间:2019/11/27
Asymmetry in above- and belowground productivity responses to N addition in a semi-arid temperate steppe 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (9) : 2958-2969
作者:  Wang, Jing;  Gao, Yingzhi;  Zhang, Yunhai;  Yang, Junjie;  Smith, Melinda D.;  Knapp, Alan K.;  Eissenstat, David M.;  Han, Xingguo
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
aboveground net primary productivity  belowground net primary productivity  N deposition  N response efficiency  root fraction  
Identification of a T follicular helper cell subset that drives anaphylactic IgE 期刊论文
SCIENCE, 2019, 365 (6456) : 883-+
作者:  Gowthaman, Uthaman;  Chen, Jennifer S.;  Zhang, Biyan;  Flynn, William F.;  Lu, Yisi;  Song, Wenzhi;  Joseph, Julie;  Gertie, Jake A.;  Xu, Lan;  Collet, Magalie A.;  Grassmann, Jessica D. S.;  Simoneau, Tregony;  Chiang, David;  Berin, M. Cecilia;  Craft, Joseph E.;  Weinstein, Jason S.;  Williams, Adam;  Eisenbarth, Stephanie C.
收藏  |  浏览/下载:6/0  |  提交时间:2019/11/27
The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight 期刊论文
SCIENCE, 2019, 364 (6436) : 144-+
作者:  Garrett-Bakelman, Francine E.;  Darshi, Manjula;  Green, Stefan J.;  Gur, Ruben C.;  Lin, Ling;  Macias, Brandon R.;  McKenna, Miles J.;  Meydan, Cem;  Mishra, Tejaswini;  Nasrini, Jad;  Piening, Brian D.;  Rizzardi, Lindsay F.;  Sharma, Kumar;  Siamwala, Jamila H.;  Taylor, Lynn;  Vitaterna, Martha Hotz;  Afkarian, Maryam;  Afshinnekoo, Ebrahim;  Ahadi, Sara;  Ambati, Aditya;  Arya, Maneesh;  Bezdan, Daniela;  Callahan, Colin M.;  Chen, Songjie;  Choi, Augustine M. K.;  Chlipala, George E.;  Contrepois, Kevin;  Covington, Marisa;  Crucian, Brian E.;  De Vivo, Immaculata;  Dinges, David F.;  Ebert, Douglas J.;  Feinberg, Jason I.;  Gandara, Jorge A.;  George, Kerry A.;  Goutsias, John;  Grills, George S.;  Hargens, Alan R.;  Heer, Martina;  Hillary, Ryan P.;  Hoofnagle, Andrew N.;  Hook, Vivian Y. H.;  Jenkinson, Garrett;  Jiang, Peng;  Keshavarzian, Ali;  Laurie, Steven S.;  Lee-McMullen, Brittany;  Lumpkins, Sarah B.;  MacKay, Matthew;  Maienschein-Cline, Mark G.;  Melnick, Ari M.;  Moore, Tyler M.;  Nakahira, Kiichi;  Patel, Hemal H.;  Pietrzyk, Robert;  Rao, Varsha;  Saito, Rintaro;  Salins, Denis N.;  Schilling, Jan M.;  Sears, Dorothy D.;  Sheridan, Caroline K.;  Stenger, Michael B.;  Tryggvadottir, Rakel;  Urban, Alexander E.;  Vaisar, Tomas;  Van Espen, Benjamin;  Zhang, Jing;  Ziegler, Michael G.;  Zwart, Sara R.;  Charles, John B.;  Kundrot, Craig E.;  Scott, Graham B. I.;  Bailey, Susan M.;  Basner, Mathias;  Feinberg, Andrew P.;  Lee, Stuart M. C.;  Mason, Christopher E.;  Mignot, Emmanuel;  Rana, Brinda K.;  Smith, Scott M.;  Snyder, Michael P.;  Turek, Fred W.
收藏  |  浏览/下载:38/0  |  提交时间:2019/11/27
Deciphering Human Contributions to Yellow River Flow Reductions and Downstream Drying Using Centuries-Long Tree Ring Records 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019, 46 (2) : 898-905
作者:  Li, Jinbao;  Xie, Shang-Ping;  Cook, Edward R.;  Chen, Fahu;  Shi, Jiangfeng;  Zhang, David D.;  Fang, Keyan;  Gou, Xiaohua;  Li, Teng;  Peng, Jianfeng;  Shi, Shiyuan;  Zhao, Yesi
收藏  |  浏览/下载:7/0  |  提交时间:2019/04/09