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Extant timetrees are consistent with a myriad of diversification histories 期刊论文
NATURE, 2020, 580 (7804) : 502-+
作者:  Bhaskar, M. K.;  Riedinger, R.;  Machielse, B.;  Levonian, D. S.;  Nguyen, C. T.;  Knall, E. N.;  Park, H.;  Englund, D.;  Loncar, M.;  Sukachev, D. D.;  Lukin, M. D.
收藏  |  浏览/下载:19/0  |  提交时间:2020/07/03

An infinite number of alternative diversification scenarios-which may have markedly different, but equally plausible, dynamics-can underpin a given time-calibrated phylogeny of extant species, suggesting many previous studies have over-interpreted phylogenetic evidence.


Time-calibrated phylogenies of extant species (referred to here as '  extant timetrees'  ) are widely used for estimating diversification dynamics(1). However, there has been considerable debate surrounding the reliability of these inferences(2-5) and, to date, this critical question remains unresolved. Here we clarify the precise information that can be extracted from extant timetrees under the generalized birth-death model, which underlies most existing methods of estimation. We prove that, for any diversification scenario, there exists an infinite number of alternative diversification scenarios that are equally likely to have generated any given extant timetree. These '  congruent'  scenarios cannot possibly be distinguished using extant timetrees alone, even in the presence of infinite data. Importantly, congruent diversification scenarios can exhibit markedly different and yet similarly plausible dynamics, which suggests that many previous studies may have over-interpreted phylogenetic evidence. We introduce identifiable and easily interpretable variables that contain all available information about past diversification dynamics, and demonstrate that these can be estimated from extant timetrees. We suggest that measuring and modelling these identifiable variables offers a more robust way to study historical diversification dynamics. Our findings also make it clear that palaeontological data will continue to be crucial for answering some macroevolutionary questions.


  
The wide-binary origin of (2014) MU69-like Kuiper belt contact binaries 期刊论文
NATURE, 2020, 580 (7804) : 463-+
作者:  Jiao, Lin;  Howard, Sean;  Ran, Sheng;  Wang, Zhenyu;  Rodriguez, Jorge Olivares;  Sigrist, Manfred;  Wang, Ziqiang;  Butch, Nicholas P.;  Madhavan, Vidya
收藏  |  浏览/下载:71/0  |  提交时间:2020/07/03

Following its flyby and first imaging of the Pluto-Charon binary, the New Horizons spacecraft visited the Kuiper belt object (KBO) 2014 MU69 (also known as (486958) Arrokoth). The imaging showed MU69 to be a contact binary that rotates at a low spin period (15.92 hours), is made of two individual lobes connected by a narrow neck and has a high obliquity (about 98 degrees)(1), properties that are similar to those of other KBO contact binaries inferred through photometric observations(2). However, all scenarios suggested so far for the origins of such configurations(3-5) have failed to reproduce these properties and their probable frequent occurrence in the Kuiper belt. Here we show that semi-secular perturbations(6,7) operating on only ultrawide KBO binaries close to their stability limit can robustly lead to gentle, slow binary mergers at arbitrarily high obliquities but low rotational velocities, reproducing the characteristics of MU69 and other similar oblique contact binaries. Using N-body simulations, we find that approximately 15 per cent of all ultrawide binaries with a cosine-uniform inclination distribution(5,9) are likely to merge through this process. Moreover, we find that such mergers are sufficiently gentle to deform the shape of the KBO only slightly. The semi-secular contact binary formation channel not only explains the observed properties of MU69, but may also apply to other Kuiper belt or asteroid belt binaries and in the Solar System and extra-solar moon systems.


The high obliquity and low rotation period of the Kuiper belt object (2014) MU69 and other similar contact binaries is successfully reproduced from the collision and post-collision characteristics of initially wide binaries.


  
Synthesis of rare sugar isomers through site-selective epimerization 期刊论文
NATURE, 2020: 403-+
作者:  Jackson, Hartland W.;  Fischer, Jana R.;  Zanotelli, Vito R. T.;  Ali, H. Raza;  Mechera, Robert;  Soysal, Savas D.;  Moch, Holger;  Muenst, Simone;  Varga, Zsuzsanna;  Weber, Walter P.;  Bodenmiller, Bernd
收藏  |  浏览/下载:15/0  |  提交时间:2020/07/03

Glycans have diverse physiological functions, ranging from energy storage and structural integrity to cell signalling and the regulation of intracellular processes(1). Although biomass-derived carbohydrates (such as d-glucose, d-xylose and d-galactose) are extracted on commercial scales, and serve as renewable chemical feedstocks and building blocks(2,3), there are hundreds of distinct monosaccharides that typically cannot be isolated from their natural sources and must instead be prepared through multistep chemical or enzymatic syntheses(4,5). These '  rare'  sugars feature prominently in bioactive natural products and pharmaceuticals, including antiviral, antibacterial, anticancer and cardiac drugs(6,7). Here we report the preparation of rare sugar isomers directly from biomass carbohydrates through site-selective epimerization reactions. Mechanistic studies establish that these reactions proceed under kinetic control, through sequential steps of hydrogen-atom abstraction and hydrogen-atom donation mediated by two distinct catalysts. This synthetic strategy provides concise and potentially extensive access to this valuable class of natural compounds.


Various rare sugars that cannot be isolated from natural sources are synthesized using light-driven epimerization, a process which may find application in other synthetic scenarios.


  
Winter climate change and the poleward range expansion of a tropical invasive tree (Brazilian pepper-Schinus terebinthifolius) 期刊论文
GLOBAL CHANGE BIOLOGY, 2019
作者:  Osland, Michael J.;  Feher, Laura C.
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27
Brazilian pepper  climate change  freezing  invasive plant  range expansion  Schinus terebinthifolius  temperature threshold  tropicalization  
Global modeling of nature's contributions to people 期刊论文
SCIENCE, 2019, 366 (6462) : 255-+
作者:  Chaplin-Kramer, Rebecca;  Sharp, Richard P.;  Weill, Charlotte;  Bennett, Elena M.;  Pascual, Unai;  Arkema, Katie K.;  Brauman, Kate A.;  Bryant, Benjamin P.;  Guerry, Anne D.;  Haddad, Nick M.;  Hamann, Maike;  Hamel, Perrine;  Johnson, Justin A.;  Mandle, Lisa;  Pereira, Henrique M.;  Polasky, Stephen;  Ruckelshaus, Mary;  Rebecca Shaw, M.;  Silver, Jessica M.;  Vogl, Adrian L.;  Daily, Gretchen C.
收藏  |  浏览/下载:12/0  |  提交时间:2019/11/27
Effects of 21st-century climate, land use, and disturbances on ecosystem carbon balance in California 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (10) : 3334-3353
作者:  Sleeter, Benjamin M.;  Marvin, David C.;  Cameron, D. Richard;  Selmants, Paul C.;  Westerline, A. LeRoy;  Kreitler, Jason;  Daniel, Colin J.;  Liu, Jinxun;  Wilson, Tamara S.
收藏  |  浏览/下载:6/0  |  提交时间:2019/11/27
California  carbon balance  climate change  disturbance  land use  scenarios  
Global warming promotes biological invasion of a honey bee pest 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (11) : 3642-3655
作者:  Cornelissen, Bram;  Neumann, Peter;  Schweiger, Oliver
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27
Aethina tumida  Apis mellifera  biological invasion  climate change  honey bees  invasive species  small hive beetles  
A global risk assessment of primates under climate and land use/cover scenarios 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (9) : 3163-3178
作者:  Carvalho, Joana S.;  Graham, Bruce;  Rebelo, Hugo;  Bocksberger, Gaelle;  Meyer, Christoph F. J.;  Wich, Serge;  Kuehl, Hjalmar S.
收藏  |  浏览/下载:16/0  |  提交时间:2019/11/27
climate change  exposure  extinction risk  hazard  land use  cover change  primate conservation  primate hotspots  species ranges  
Impacts of intensifying or expanding cereal cropping in sub-Saharan Africa on greenhouse gas emissions and food security 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (11) : 3720-3730
作者:  van Loon, Marloes P.;  Hijbeek, Renske;  ten Berge, Hein F. M.;  De Sy, Veronique;  ten Broeke, Guus A.;  Solomon, Dawit;  van Ittersum, Martin K.
收藏  |  浏览/下载:18/0  |  提交时间:2019/11/27
fertilizer  food self-sufficiency  intensification  land use conversion  nitrogen  nutrient use efficiency  yield gaps  
Back home? Uncertainties for returning seized animals to the source-areas under climate change 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (10) : 3242-3253
作者:  Gomes Destro, Guilherme Fernando;  de Fernandes, Virginia;  Alves de Andrade, Andre Felipe;  De Marco, Paulo;  Terribile, Levi Carina
收藏  |  浏览/下载:6/0  |  提交时间:2019/11/27
animal trafficking  Ecological Niche Modeling (ENM)  global warming  passerine  population restoration  reinforcement  reintroduction