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Structure and catalytic mechanism of a human triacylglycerol-synthesis enzyme 期刊论文
NATURE, 2020, 581 (7808) : 323-+
作者:  Nikoo, Mohammad Samizadeh;  Jafari, Armin;  Perera, Nirmana;  Zhu, Minghua;  Santoruvo, Giovanni;  Matioli, Elison
收藏  |  浏览/下载:20/0  |  提交时间:2020/07/03

Triacylglycerols store metabolic energy in organisms and have industrial uses as foods and fuels. Excessive accumulation of triacylglycerols in humans causes obesity and is associated with metabolic diseases(1). Triacylglycerol synthesis is catalysed by acyl-CoA diacylglycerol acyltransferase (DGAT) enzymes(2-4), the structures and catalytic mechanisms of which remain unknown. Here we determined the structure of dimeric human DGAT1, a member of the membrane-bound O-acyltransferase (MBOAT) family, by cryo-electron microscopy at approximately 3.0 angstrom resolution. DGAT1 forms a homodimer through N-terminal segments and a hydrophobic interface, with putative active sites within the membrane region. A structure obtained with oleoyl-CoA substrate resolved at approximately 3.2 angstrom shows that the CoA moiety binds DGAT1 on the cytosolic side and the acyl group lies deep within a hydrophobic channel, positioning the acyl-CoA thioester bond near an invariant catalytic histidine residue. The reaction centre is located inside a large cavity, which opens laterally to the membrane bilayer, providing lipid access to the active site. A lipid-like density-possibly representing an acyl-acceptor molecule-is located within the reaction centre, orthogonal to acyl-CoA. Insights provided by the DGAT1 structures, together with mutagenesis and functional studies, provide the basis for a model of the catalysis of triacylglycerol synthesis by DGAT.


Cryo-electron microscopy structures and functional and mutagenesis studies provide insights into the catalysis of triacylglycerol synthesis by human acyl-CoA diacylglycerol acyltransferase at its intramembrane active site.


  
Structure and mechanism of the ER-based glucosyltransferase ALG6 期刊论文
NATURE, 2020, 579 (7799) : 443-+
作者:  van Veen, Sarah;  Martin, Shaun;  Van den Haute, Chris;  Benoy, Veronick;  Lyons, Joseph;  Vanhoutte, Roeland;  Kahler, Jan Pascal;  Decuypere, Jean-Paul;  Gelders, Geraldine;  Lambie, Eric;  Zielich, Jeffrey;  Swinnen, Johannes V.;  Annaert, Wim;  Agostinis, Patrizia;  Ghesquiere, Bart;  Verhelst, Steven;  Baekelandt, Veerle;  Eggermont, Jan;  Vangheluwe, Peter
收藏  |  浏览/下载:14/0  |  提交时间:2020/07/03

Analyses reveal a previously undescribed transmembrane protein fold in the endoplasmic reticulum-based glucosyltransferase ALG6 and provide a structural basis for understanding the glucose transfer mechanism.


In eukaryotic protein N-glycosylation, a series of glycosyltransferases catalyse the biosynthesis of a dolichylpyrophosphate-linked oligosaccharide before its transfer onto acceptor proteins(1). The final seven steps occur in the lumen of the endoplasmic reticulum (ER) and require dolichylphosphate-activated mannose and glucose as donor substrates(2). The responsible enzymes-ALG3, ALG9, ALG12, ALG6, ALG8 and ALG10-are glycosyltransferases of the C-superfamily (GT-Cs), which are loosely defined as containing membrane-spanning helices and processing an isoprenoid-linked carbohydrate donor substrate(3,4). Here we present the cryo-electron microscopy structure of yeast ALG6 at 3.0 angstrom resolution, which reveals a previously undescribed transmembrane protein fold. Comparison with reported GT-C structures suggests that GT-C enzymes contain a modular architecture with a conserved module and a variable module, each with distinct functional roles. We used synthetic analogues of dolichylphosphate-linked and dolichylpyrophosphate-linked sugars and enzymatic glycan extension to generate donor and acceptor substrates using purified enzymes of the ALG pathway to recapitulate the activity of ALG6 in vitro. A second cryo-electron microscopy structure of ALG6 bound to an analogue of dolichylphosphate-glucose at 3.9 angstrom resolution revealed the active site of the enzyme. Functional analysis of ALG6 variants identified a catalytic aspartate residue that probably acts as a general base. This residue is conserved in the GT-C superfamily. Our results define the architecture of ER-luminal GT-C enzymes and provide a structural basis for understanding their catalytic mechanisms.


  
Double PIK3CA mutations in cis increase oncogenicity and sensitivity to PI3K alpha inhibitors 期刊论文
SCIENCE, 2019, 366 (6466) : 714-+
作者:  Vasan, Neil;  Razavi, Pedram;  Johnson, Jared L.;  Shao, Hong;  Shah, Hardik;  Antoine, Alesia;  Ladewig, Erik;  Gorelick, Alexander;  Lin, Ting-Yu;  Toska, Eneda;  Xu, Guotai;  Kazmi, Abiha;  Chang, Matthew T.;  Taylor, Barry S.;  Dickler, Maura N.;  Jhaveri, Komal;  Chandarlapaty, Sarat;  Rabadan, Raul;  Reznik, Ed;  Smith, Melissa L.;  Sebra, Robert;  Schimmoller, Frauke;  Wilson, Timothy R.;  Friedman, Lori S.;  Cantley, Lewis C.;  Scaltriti, Maurizio;  Baselga, Jose
收藏  |  浏览/下载:15/0  |  提交时间:2020/02/17
Low-barrier hydrogen bonds in enzyme cooperativity 期刊论文
NATURE, 2019, 573 (7775) : 609-+
作者:  Dai, Shaobo;  Funk, Lisa-Marie;  von Pappenheim, Fabian Rabe;  Sautner, Viktor;  Paulikat, Mirko;  Schroder, Benjamin;  Uranga, Jon;  Mata, Ricardo A.;  Tittmann, Kai
收藏  |  浏览/下载:5/0  |  提交时间:2019/11/27
Synthesis of a copper-supported triplet nitrene complex pertinent to copper-catalyzed amination 期刊论文
SCIENCE, 2019, 365 (6458) : 1138-+
作者:  Carsch, Kurtis M.;  DiMucci, Ida M.;  Iovan, Diana A.;  Li, Alex;  Zheng, Shao-Liang;  Titus, Charles J.;  Lee, Sang Jun;  Irwin, Kent D.;  Nordlund, Dennis;  Lancaster, Kyle M.;  Betley, Theodore A.
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/27
TIR domains of plant immune receptors are NAD(+)-cleaving enzymes that promote cell death 期刊论文
SCIENCE, 2019, 365 (6455) : 799-+
作者:  Wan, Li;  Essuman, Kow;  Anderson, Ryan G.;  Sasaki, Yo;  Monteiro, Freddy;  Chung, Eui-Hwan;  Nishimura, Erin Osborne;  DiAntonio, Aaron;  Milbrandt, Jeffrey;  Dangl, Jeffery L.;  Nishimura, Marc T.
收藏  |  浏览/下载:5/0  |  提交时间:2019/11/27
Structure of the activated Edc1-Dcp1-Dcp2-Edc3 mRNA decapping complex with substrate analog poised for catalysis 期刊论文
NATURE COMMUNICATIONS, 2018, 9
作者:  Mugridge, Jeffrey S.;  Tibble, Ryan W.;  Ziemniak, Marcin;  Jemielity, Jacek;  Gross, John D.
收藏  |  浏览/下载:1/0  |  提交时间:2019/11/27
Molecular architecture of the multifunctional collagen lysyl hydroxylase and glycosyltransferase LH3 期刊论文
NATURE COMMUNICATIONS, 2018, 9
作者:  Scietti, Luigi;  Chiapparino, Antonella;  De Giorgi, Francesca;  Fumagalli, Marco;  Khoriauli, Lela;  Nergadze, Solomon;  Basu, Shibom;  Olieric, Vincent;  Cucca, Lucia;  Banushi, Blerida;  Profumo, Antonella;  Giulotto, Elena;  Gissen, Paul;  Forneris, Federico
收藏  |  浏览/下载:1/0  |  提交时间:2019/11/27
ORGANIC CHEMISTRY Copper's rapid ascent in visible-light photoredox catalysis 期刊论文
SCIENCE, 2019, 364 (6439) : 450-+
作者:  Hossain, Asik;  Bhattacharyya, Aditya;  Reiser, Oliver
收藏  |  浏览/下载:1/0  |  提交时间:2019/11/27
HuR regulates telomerase activity through TERC methylation 期刊论文
NATURE COMMUNICATIONS, 2018, 9
作者:  Tang, Hao;  Wang, Hu;  Cheng, Xiaolei;  Fan, Xiuqin;  Yang, Fan;  Zhang, Mengmeng;  Chen, Yanlian;  Tian, Yuyang;  Liu, Cihang;  Shao, Dongxing;  Jiang, Bin;  Dou, Yali;  Cong, Yusheng;  Xing, Junyue;  Zhang, Xiaotian;  Yi, Xia;  Zhou Songyang;  Ma, Wenbin;  Zhao, Yong;  Wang, Xian;  Ma, Jinbiao;  Gorospe, Myriam;  Ju, Zhenyu;  Wang, Wengong
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27