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Stress- and ubiquitylation-dependent phase separation of the proteasome 期刊论文
NATURE, 2020, 578 (7794) : 296-+
作者:  Jewell, Jessica;  Emmerling, Johannes;  Vinichenko, Vadim;  Bertram, Christoph;  Berger, Loic;  Daly, Hannah E.;  Keppo, Ilkka;  Krey, Volker;  Gernaat, David E. H. J.;  Fragkiadakis, Kostas;  McCollum, David;  Paroussas, Leonidas;  Riahi, Keywan;  Tavoni, Massimo;  van Vuuren, Detlef
收藏  |  浏览/下载:22/0  |  提交时间:2020/07/03

The proteasome is a major proteolytic machine that regulates cellular proteostasis through selective degradation of ubiquitylated proteins(1,2). A number of ubiquitin-related molecules have recently been found to be involved in the regulation of biomolecular condensates or membraneless organelles, which arise by liquid-liquid phase separation of specific biomolecules, including stress granules, nuclear speckles and autophagosomes(3-8), but it remains unclear whether the proteasome also participates in such regulation. Here we reveal that proteasome-containing nuclear foci form under acute hyperosmotic stress. These foci are transient structures that contain ubiquitylated proteins, p97 (also known as valosin-containing protein (VCP)) and multiple proteasome-interacting proteins, which collectively constitute a proteolytic centre. The major substrates for degradation by these foci were ribosomal proteins that failed to properly assemble. Notably, the proteasome foci exhibited properties of liquid droplets. RAD23B, a substrate-shuttling factor for the proteasome, and ubiquitylated proteins were necessary for formation of proteasome foci. In mechanistic terms, a liquid-liquid phase separation was triggered by multivalent interactions of two ubiquitin-associated domains of RAD23B and ubiquitin chains consisting of four or more ubiquitin molecules. Collectively, our results suggest that ubiquitin-chain-dependent phase separation induces the formation of a nuclear proteolytic compartment that promotes proteasomal degradation.


Hyperosmotic stress leads to a phase separation of the proteasome, triggered by interactions between RAD23B and ubiquitylated proteins, which bring together p97 and proteasome-associated proteins into nuclear proteolytic foci.


  
Will DNA barcoding meet taxonomic needs? 期刊论文
SCIENCE, 2019, 365 (6456) : 873-874
作者:  Pinheiro, H. T.;  Moreau, C. S.;  Daly, M.;  Rocha, L. A.
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27
Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent 期刊论文
SCIENCE, 2019, 365 (6449) : 173-+
作者:  Verdugo, Marta Pereira;  Mullin, Victoria E.;  Scheu, Amelie;  Mattiangeli, Valeria;  Daly, Kevin G.;  Delser, Pierpaolo Maisano;  Hare, Andrew J.;  Burger, Joachim;  Collins, Matthew J.;  Kehati, Ron;  Hesse, Paula;  Fulton, Deirdre;  Sauer, Eberhard W.;  Mohaseb, Fatemeh A.;  Davoudi, Hossein;  Khazaeli, Roya;  Lhuillier, Johanna;  Rapin, Claude;  Ebrahimi, Saeed;  Khasanov, Mutalib;  Vahidi, S. M. Farhad;  MacHugh, David E.;  Ertugrul, Okan;  Koukouli-Chrysanthaki, Chaido;  Sampson, Adamantios;  Kazantzis, George;  Kontopoulos, Ioannis;  Bulatovic, Jelena;  Stojanovic, Ivana;  Mikdad, Abdesalam;  Benecke, Norbert;  Linstaedter, Joerg;  Sablin, Mikhail;  Bendrey, Robin;  Gourichon, Lionel;  Arbuckle, Benjamin S.;  Mashkour, Marjan;  Orton, David;  Horwitz, Liora Kolska;  Teasdale, Matthew D.;  Bradley, Daniel G.
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27
Craters, boulders and regolith of (101955) Bennu indicative of an old and dynamic surface (vol 12, pg 242, 2019) 期刊论文
NATURE GEOSCIENCE, 2019, 12 (5) : 399-399
作者:  Walsh, K. J.;  Jawin, E. R.;  Ballouz, R. -L.;  Barnouin, O. S.;  Bierhaus, E. B.;  Connolly, H. C., Jr.;  Molaro, J. L.;  McCoy, T. J.;  Delbo, M.;  Hartzell, C. M.;  Pajola, M.;  Schwartz, S. R.;  Trang, D.;  Asphaug, E.;  Becker, K. J.;  Beddingfield, C. B.;  Bennett, C. A.;  Bottke, W. F.;  Burke, K. N.;  Clark, B. C.;  Daly, M. G.;  DellaGiustina, D. N.;  Dworkin, J. P.;  Elder, C. M.;  Golish, D. R.;  Hildebrand, A. R.;  Malhotra, R.;  Marshall, J.;  Michel, P.;  Nolan, M. C.;  Perry, M. E.;  Rizk, B.;  Ryan, A.;  Sandford, S. A.;  Scheeres, D. J.;  Susorney, H. C. M.;  Thuillet, F.;  Lauretta, D. S.
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/26
Strain-specific antibody therapy prevents cytomegalovirus reactivation after transplantation 期刊论文
SCIENCE, 2019, 363 (6424) : 288-+
作者:  Martins, Jose Paulo;  Andoniou, Christopher E.;  Fleming, Peter;  Kuns, Rachel D.;  Schuster, Iona S.;  Voigt, Valentina;  Daly, Sheridan;  Varelias, Antiopi;  Tey, Siok-Keen;  Degli-Esposti, Mariapia A.;  Hill, Geoffrey R.
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27
Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder 期刊论文
SCIENCE, 2018, 362 (6420) : 1270-+
作者:  An, Joon-Yong;  Lin, Kevin;  Zhu, Lingxue;  Werling, Donna M.;  Dong, Shan;  Brand, Harrison;  Wang, Harold Z.;  Zhao, Xuefang;  Schwartz, Grace B.;  Collins, Ryan L.;  Currall, Benjamin B.;  Dastmalchi, Claudia;  Dea, Jeanselle;  Duhn, Clif;  Gilson, Michael C.;  Klei, Lambertus;  Liang, Lindsay;  Markenscoff-Papadimitriou, Eirene;  Pochareddy, Sirisha;  Ahituv, Nadav;  Buxbaum, Joseph D.;  Coon, Hilary;  Daly, Mark J.;  Kim, Young Shin;  Marth, Gabor T.;  Neale, Benjamin M.;  Quinlan, Aaron R.;  Rubenstein, John L.;  Sestan, Nenad;  State, Matthew W.;  Willsey, A. Jeremy;  Talkowski, Michael E.;  Devlin, Bernie;  Roeder, Kathryn;  Sanders, Stephan J.
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/27
Venoms to the rescue 期刊论文
SCIENCE, 2018, 361 (6405) : 842-844
作者:  Holford, Mande;  Daly, Marymegan;  King, Glenn F.;  Norton, Raymond S.
收藏  |  浏览/下载:0/0  |  提交时间:2019/11/27
Ancient goat genomes reveal mosaic domestication in the Fertile Crescent 期刊论文
SCIENCE, 2018, 361 (6397) : 85-87
作者:  Daly, Kevin G.;  Delser, Pierpaolo Maisano;  Mullin, Victoria E.;  Scheu, Amelie;  Mattiangeli, Valeria;  Teasdale, Matthew D.;  Hare, Andrew J.;  Burger, Joachim;  Verdugo, Marta Pereira;  Collins, Matthew J.;  Kehati, Ron;  Erek, Cevdet Merih;  Bar-Oz, Guy;  Pompanon, Francois;  Cumer, Tristan;  Cakirlar, Canan;  Mohaseb, Azadeh Fatemeh;  Decruyenaere, Delphine;  Davoudi, Hossein;  Cevik, Ozlem;  Rollefson, Gary;  Vigne, Jean-Denis;  Khazaeli, Roya;  Fathi, Homa;  Doost, Sanaz Beizaee;  Sorkhani, Roghayeh Rahimi;  Vahdati, Ali Akbar;  Sauer, Eberhard W.;  Kharanaghi, Hossein Azizi;  Maziar, Sepideh;  Gasparian, Boris;  Pinhasi, Ron;  Martin, Louise;  Orton, David;  Arbuckle, Benjamin S.;  Benecke, Norbert;  Manica, Andrea;  Horwitz, Liora Kolska;  Mashkour, Marjan;  Bradley, Daniel G.
收藏  |  浏览/下载:12/0  |  提交时间:2019/11/27
Optimizing the impact of low-efficacy influenza vaccines 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2018, 115 (20) : 5151-5156
作者:  Sah, Pratha;  Medlock, Jan;  Fitzpatrick, Meagan C.;  Singer, Burton H.;  Galvani, Alison P.
收藏  |  浏览/下载:4/0  |  提交时间:2019/11/27
mathematical model  age structured  vaccination  DALY  hospitalization  
C1orf106 is a colitis risk gene that regulates stability of epithelial adherens junctions 期刊论文
SCIENCE, 2018, 359 (6380) : 1161-+
作者:  Mohanan, Vishnu;  Nakata, Toru;  Desch, A. Nicole;  Levesque, Chloe;  Boroughs, Angela;  Guzman, Gaelen;  Cao, Zhifang;  Creasey, Elizabeth;  Yao, Junmei;  Boucher, Gabrielle;  Charron, Guy;  Bhan, Atul K.;  Schenone, Monica;  Carr, Steven A.;  Reinecker, Hans-Christian;  Daly, Mark J.;  Rioux, John D.;  Lassen, Kara G.;  Xavier, Ramnik J.
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27