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DOI10.1038/s41467-019-10842-5
Structure of the activated Edc1-Dcp1-Dcp2-Edc3 mRNA decapping complex with substrate analog poised for catalysis
Mugridge, Jeffrey S.1; Tibble, Ryan W.1,2; Ziemniak, Marcin3,4,5; Jemielity, Jacek4; Gross, John D.1,2
2019-07-22
发表期刊NATURE COMMUNICATIONS
ISSN2041-1723
出版年2018
卷号9
文章类型Article
语种英语
国家USA; Poland
英文摘要

The conserved decapping enzyme Dcp2 recognizes and removes the 5' eukaryotic cap from mRNA transcripts in a critical step of many cellular RNA decay pathways. Dcp2 is a dynamic enzyme that functions in concert with the essential activator Dcp1 and a diverse set of coactivators to selectively and efficiently decap target mRNAs in the cell. Here we present a 2.84 angstrom crystal structure of K. lactis Dcp1-Dcp2 in complex with coactivators Edc1 and Edc3, and with substrate analog bound to the Dcp2 active site. Our structure shows how Dcp2 recognizes cap substrate in the catalytically active conformation of the enzyme, and how coactivator Edc1 forms a three-way interface that bridges the domains of Dcp2 to consolidate the active conformation. Kinetic data reveal Dcp2 has selectivity for the first transcribed nucleotide during the catalytic step. The heterotetrameric Edc1-Dcp1-Dcp2-Edc3 structure shows how coactivators Edc1 and Edc3 can act simultaneously to activate decapping catalysis.


领域资源环境
收录类别SCI-E
WOS记录号WOS:000427907900012
WOS关键词GENOME-WIDE ANALYSIS ; PROTEIN COMPLEXES ; CAP RECOGNITION ; ENZYME DCP2 ; DEGRADATION ; IDENTIFICATION ; SURVEILLANCE ; MECHANISMS ; DYNAMICS ; POMBE
WOS类目Multidisciplinary Sciences
WOS研究方向Science & Technology - Other Topics
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文献类型期刊论文
条目标识符http://119.78.100.173/C666/handle/2XK7JSWQ/204461
专题资源环境科学
作者单位1.Univ Calif San Francisco, Dept Pharmaceut Chem, San Francisco, CA 94158 USA;
2.Univ Calif San Francisco, Program Chem & Chem Biol, San Francisco, CA 94158 USA;
3.Univ Warsaw, Fac Phys, Inst Expt Phys, Div Biophys, PL-02089 Warsaw, Poland;
4.Univ Warsaw, Ctr New Technol, PL-02097 Warsaw, Poland;
5.Univ Warsaw, Dept Chem, Biol & Chem Res Ctr, PL-02089 Warsaw, Poland
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Mugridge, Jeffrey S.,Tibble, Ryan W.,Ziemniak, Marcin,et al. Structure of the activated Edc1-Dcp1-Dcp2-Edc3 mRNA decapping complex with substrate analog poised for catalysis[J]. NATURE COMMUNICATIONS,2019,9.
APA Mugridge, Jeffrey S.,Tibble, Ryan W.,Ziemniak, Marcin,Jemielity, Jacek,&Gross, John D..(2019).Structure of the activated Edc1-Dcp1-Dcp2-Edc3 mRNA decapping complex with substrate analog poised for catalysis.NATURE COMMUNICATIONS,9.
MLA Mugridge, Jeffrey S.,et al."Structure of the activated Edc1-Dcp1-Dcp2-Edc3 mRNA decapping complex with substrate analog poised for catalysis".NATURE COMMUNICATIONS 9(2019).
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