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Biofuel burning and human respiration bias on satellite estimates of fossil fuel CO(2)emissions 期刊论文
ENVIRONMENTAL RESEARCH LETTERS, 2020, 15 (7)
作者:  Ciais, P.;  Wang, Y.;  Andrew, R.;  Breon, F. M.;  Chevallier, F.;  Broquet, G.;  Nabuurs, G. J.;  Peters, G.;  McGrath, M.;  Meng, W.;  Zheng, B.;  Tao, S.
收藏  |  浏览/下载:11/0  |  提交时间:2020/08/18
fossil fuel emissions  satellites  biofuels  
Updraft and Downdraft Core Size and Intensity as Revealed by Radar Wind Profilers: MCS Observations and Idealized Model Comparisons 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2020, 125 (11)
作者:  Wang, Die;  Giangrande, Scott E.;  Feng, Zhe;  Hardin, Joseph C.;  Prein, Andreas F.
收藏  |  浏览/下载:16/0  |  提交时间:2020/08/18
mesoscale convective system  radar wind profiler  vertical velocity  Weather Research and Forecasting model  mass flux  convective draft  
Atmospheric Research Over the Western North Atlantic Ocean Region and North American East Coast: A Review of Past Work and Challenges Ahead 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2020, 125 (6)
作者:  Sorooshian, Armin;  Corral, Andrea F.;  Braun, Rachel A.;  Cairns, Brian;  Crosbie, Ewan;  Ferrare, Richard;  Hair, Johnathan;  Kleb, Mary M.;  Mardi, Ali Hossein;  Maring, Hal;  McComiskey, Allison;  Moore, Richard;  Painemal, David;  Scarino, Amy Jo;  Schlosser, Joseph;  Shingler, Taylor;  Shook, Michael;  Wang, Hailong;  Zeng, Xubin;  Ziemba, Luke;  Zuidema, Paquita
收藏  |  浏览/下载:8/0  |  提交时间:2020/07/02
Atlantic Ocean  Aerosol  Gas  Deposition  Cloud  ACTIVATE  
Action of a minimal contractile bactericidal nanomachine 期刊论文
NATURE, 2020, 580 (7805) : 658-+
作者:  Peng, Ruchao;  Xu, Xin;  Jing, Jiamei;  Wang, Min;  Peng, Qi;  Liu, Sheng;  Wu, Ying;  Bao, Xichen;  Wang, Peiyi;  Qi, Jianxun;  Gao, George F.;  Shi, Yi
收藏  |  浏览/下载:13/0  |  提交时间:2020/07/03

The authors report near-atomic resolution structures of the R-type bacteriocin from Pseudomonas aeruginosa in the pre-contraction and post-contraction states, and these structures provide insight into the mechanism of action of molecular syringes.


R-type bacteriocins are minimal contractile nanomachines that hold promise as precision antibiotics(1-4). Each bactericidal complex uses a collar to bridge a hollow tube with a contractile sheath loaded in a metastable state by a baseplate scaffold(1,2). Fine-tuning of such nucleic acid-free protein machines for precision medicine calls for an atomic description of the entire complex and contraction mechanism, which is not available from baseplate structures of the (DNA-containing) T4 bacteriophage(5). Here we report the atomic model of the complete R2 pyocin in its pre-contraction and post-contraction states, each containing 384 subunits of 11 unique atomic models of 10 gene products. Comparison of these structures suggests the following sequence of events during pyocin contraction: tail fibres trigger lateral dissociation of baseplate triplexes  the dissociation then initiates a cascade of events leading to sheath contraction  and this contraction converts chemical energy into mechanical force to drive the iron-tipped tube across the bacterial cell surface, killing the bacterium.


  
New Generation of Climate Models Track Recent Unprecedented Changes in Earth's Radiation Budget Observed by CERES 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2020, 47 (5)
作者:  Loeb, Norman G.;  Wang, Hailan;  Allan, Richard P.;  Andrews, Timothy;  Armour, Kyle;  Cole, Jason N. S.;  Dufresne, Jean-Louis;  Forster, Piers;  Gettelman, Andrew;  Guo, Huan;  Mauritsen, Thorsten;  Ming, Yi;  Paynter, David;  Proistosescu, Cristian;  Stuecker, Malte F.;  Willen, Ulrika;  Wyser, Klaus
收藏  |  浏览/下载:15/0  |  提交时间:2020/07/02
Evaluation of sea salt aerosols in climate systems: global climate modeling and observation-based analyses* 期刊论文
ENVIRONMENTAL RESEARCH LETTERS, 2020, 15 (3)
作者:  Chen, Yi-Chun;  Li, Jui-Lin F.;  Lee, Wei-Liang;  Diner, David J.;  Garay, Michael J.;  Jiang, Jonathan H.;  Wang, Yi-Hui;  Yu, Jia-Yuh;  Kalashnikova, Olga, V
收藏  |  浏览/下载:18/0  |  提交时间:2020/07/02
global climate modeling  aerosols  sea salt  falling ice radiative effects  
Thiolated arsenic species observed in rice paddy pore waters 期刊论文
NATURE GEOSCIENCE, 2020, 13 (4) : 282-+
作者:  Wang, Jiajia;  Kerl, Carolin F.;  Hu, Pengjie;  Martin, Maria;  Mu, Tingting;  Brueggenwirth, Lena;  Wu, Guangmei;  Said-Pullicino, Daniel;  Romani, Marco;  Wu, Longhua;  Planer-Friedrich, Britta
收藏  |  浏览/下载:5/0  |  提交时间:2020/05/13
Mechanical regulation of glycolysis via cytoskeleton architecture 期刊论文
NATURE, 2020, 578 (7796) : 621-+
作者:  Faivre, Emily J.;  McDaniel, Keith F.;  Albert, Daniel H.;  Mantena, Srinivasa R.;  Plotnik, Joshua P.;  Wilcox, Denise;  Zhang, Lu;  Bui, Mai H.;  Sheppard, George S.;  Wang, Le;  Sehgal, Vasudha;  Lin, Xiaoyu;  Huang, Xiaoli;  Lu, Xin;  Uziel, Tamar;  Hessler, Paul;  Lam, Lloyd T.;  Bellin, Richard J.;  Mehta, Gaurav;  Fidanze, Steve;  Pratt, John K.;  Liu, Dachun;  Hasvold, Lisa A.;  Sun, Chaohong;  Panchal, Sanjay C.;  Nicolette, John J.;  Fossey, Stacey L.;  Park, Chang H.;  Longenecker, Kenton;  Bigelow, Lance;  Torrent, Maricel;  Rosenberg, Saul H.;  Kati, Warren M.;  Shen, Yu
收藏  |  浏览/下载:15/0  |  提交时间:2020/07/03

The mechanics of the cellular microenvironment continuously modulates cell functions such as growth, survival, apoptosis, differentiation and morphogenesis via cytoskeletal remodelling and actomyosin contractility(1-3). Although all of these processes consume energy(4,5), it is unknown whether and how cells adapt their metabolic activity to variable mechanical cues. Here we report that the transfer of human bronchial epithelial cells from stiff to soft substrates causes a downregulation of glycolysis via proteasomal degradation of the rate-limiting metabolic enzyme phosphofructokinase (PFK). PFK degradation is triggered by the disassembly of stress fibres, which releases the PFK-targeting E3 ubiquitin ligase tripartite motif (TRIM)-containing protein 21 (TRIM21). Transformed non-small-cell lung cancer cells, which maintain high glycolytic rates regardless of changing environmental mechanics, retain PFK expression by downregulating TRIM21, and by sequestering residual TRIM21 on a stress-fibre subset that is insensitive to substrate stiffness. Our data reveal a mechanism by which glycolysis responds to architectural features of the actomyosin cytoskeleton, thus coupling cell metabolism to the mechanical properties of the surrounding tissue. These processes enable normal cells to tune energy production in variable microenvironments, whereas the resistance of the cytoskeleton in response to mechanical cues enables the persistence of high glycolytic rates in cancer cells despite constant alterations of the tumour tissue.


Glycolysis in normal epithelial cells responds to microenvironmental mechanics via the modulation of actin bundles that sequester the phosphofructokinase-targeting ubiquitin ligase TRIM21, a process superseded by persistent actin bundles in cancer cells.


  
Single-cell and spatial transcriptomics reveal somitogenesis in gastruloids 期刊论文
NATURE, 2020
作者:  Nixon, Christopher C.;  Mavigner, Maud;  Sampey, Gavin C.;  Brooks, Alyssa D.;  Spagnuolo, Rae Ann;  Irlbeck, David M.;  Mattingly, Cameron;  Ho, Phong T.;  Schoof, Nils;  Cammon, Corinne G.;  Tharp, Greg K.;  Kanke, Matthew;  Wang, Zhang;  Cleary, Rachel A.;  Upadhyay, Amit A.;  De, Chandrav;  Wills, Saintedym R.;  Falcinelli, Shane D.;  Galardi, Cristin;  Walum, Hasse;  Schramm, Nathaniel J.;  Deutsch, Jennifer;  Lifson, Jeffrey D.;  Fennessey, Christine M.;  Keele, Brandon F.;  Jean, Sherrie;  Maguire, Sean;  Liao, Baolin;  Browne, Edward P.;  Ferris, Robert G.;  Brehm, Jessica H.;  Favre, David;  Vanderford, Thomas H.;  Bosinger, Steven E.;  Jones, Corbin D.;  Routy, Jean-Pierre;  Archin, Nancie M.;  Margolis, David M.;  Wahl, Angela;  Dunham, Richard M.;  Silvestri, Guido;  Chahroudi, Ann;  Garcia, J. Victor
收藏  |  浏览/下载:34/0  |  提交时间:2020/07/03

Single-cell RNA sequencing and spatial transcriptomics reveal that the somitogenesis clock is active in mouse gastruloids, which can be induced to generate somites with the correct rostral-caudal patterning.


Gastruloids are three-dimensional aggregates of embryonic stem cells that display key features of mammalian development after implantation, including germ-layer specification and axial organization(1-3). To date, the expression pattern of only a small number of genes in gastruloids has been explored with microscopy, and the extent to which genome-wide expression patterns in gastruloids mimic those in embryos is unclear. Here we compare mouse gastruloids with mouse embryos using single-cell RNA sequencing and spatial transcriptomics. We identify various embryonic cell types that were not previously known to be present in gastruloids, and show that key regulators of somitogenesis are expressed similarly between embryos and gastruloids. Using live imaging, we show that the somitogenesis clock is active in gastruloids and has dynamics that resemble those in vivo. Because gastruloids can be grown in large quantities, we performed a small screen that revealed how reduced FGF signalling induces a short-tail phenotype in embryos. Finally, we demonstrate that embedding in Matrigel induces gastruloids to generate somites with the correct rostral-caudal patterning, which appear sequentially in an anterior-to-posterior direction over time. This study thus shows the power of gastruloids as a model system for exploring development and somitogenesis in vitro in a high-throughput manner.


  
Climate-forced sea-level lowstands in the Indian Ocean during the last two millennia 期刊论文
NATURE GEOSCIENCE, 2020, 13 (1) : 61-+
作者:  Kench, Paul S.;  McLean, Roger F.;  Owen, Susan D.;  Ryan, Emma;  Morgan, Kyle M.;  Ke, Lin;  Wang, Xianfeng;  Roy, Keven
收藏  |  浏览/下载:5/0  |  提交时间:2020/07/02