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Early Holocene crop cultivation and landscape modification in Amazonia 期刊论文
NATURE, 2020, 581 (7807) : 190-+
作者:  Hendershot, J. Nicholas;  Smith, Jeffrey R.;  Anderson, Christopher B.;  Letten, Andrew D.;  Frishkoff, Luke O.;  Zook, Jim R.;  Fukami, Tadashi;  Daily, Gretchen C.
收藏  |  浏览/下载:32/0  |  提交时间:2020/07/03

The onset of plant cultivation is one of the most important cultural transitions in human history(1-4). Southwestern Amazonia has previously been proposed as an early centre of plant domestication, on the basis of molecular markers that show genetic similarities between domesticated plants and wild relatives(4-6). However, the nature of the early human occupation of southwestern Amazonia, and the history of plant cultivation in this region, are poorly understood. Here we document the cultivation of squash (Cucurbita sp.) at about 10,250 calibrated years before present (cal. yr bp), manioc (Manihot sp.) at about 10,350 cal. yr bp and maize (Zea mays) at about 6,850 cal. yr bp, in the Llanos de Moxos (Bolivia). We show that, starting at around 10,850 cal. yr bp, inhabitants of this region began to create a landscape that ultimately comprised approximately 4,700 artificial forest islands within a treeless, seasonally flooded savannah. Our results confirm that the Llanos de Moxos is a hotspot for early plant cultivation and demonstrate that-ever since their arrival in Amazonia-humans have markedly altered the landscape, with lasting repercussions for habitat heterogeneity and species conservation.


  
Construction of a human cell landscape at single-cell level 期刊论文
NATURE, 2020, 581 (7808) : 303-+
作者:  Han, Yan;  Reyes, Alexis A.;  Malik, Sara;  He, Yuan
收藏  |  浏览/下载:12/0  |  提交时间:2020/07/03

Single-cell analysis is a valuable tool for dissecting cellular heterogeneity in complex systems(1). However, a comprehensive single-cell atlas has not been achieved for humans. Here we use single-cell mRNA sequencing to determine the cell-type composition of all major human organs and construct a scheme for the human cell landscape (HCL). We have uncovered a single-cell hierarchy for many tissues that have not been well characterized. We established a '  single-cell HCL analysis'  pipeline that helps to define human cell identity. Finally, we performed a single-cell comparative analysis of landscapes from human and mouse to identify conserved genetic networks. We found that stem and progenitor cells exhibit strong transcriptomic stochasticity, whereas differentiated cells are more distinct. Our results provide a useful resource for the study of human biology.


Single-cell RNA sequencing is used to generate a dataset covering all major human organs in both adult and fetal stages, enabling comparison with similar datasets for mouse tissues.


  
Trait plasticity alters the range of possible coexistence conditions in a competition-colonisation trade-off 期刊论文
ECOLOGY LETTERS, 2020, 23 (5) : 791-799
作者:  Muthukrishnan, Ranjan;  Sullivan, Lauren L.;  Shaw, Allison K.;  Forester, James D.
收藏  |  浏览/下载:7/0  |  提交时间:2020/07/02
Dispersal  landscape heterogeneity  niche stabilisation  seed size  simulation model  trait plasticity  
Effects of disturbance type and microhabitat on species and functional diversity relationship in stream-bank plant communities 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 432: 812-822
作者:  Biswas, Shekhar R.;  Mallik, Azim U.;  Braithwaite, Nicholas T.;  Biswas, Prity L.
收藏  |  浏览/下载:6/0  |  提交时间:2019/04/09
Clearcut  Evenness  Landscape heterogeneity  Mixed-effect modeling  Riparian plant community  Wildfire  
Intermediate-scale horizontal isoprene concentrations in the near-canopy forest atmosphere and implications for emission heterogeneity 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2019, 116 (39) : 19318-19323
作者:  Batista, Carla E.;  Ye, Jianhuai;  Ribeiro, Igor O.;  Guimaraes, Patricia C.;  Medeiros, Adan S. S.;  Barbosa, Rafael G.;  Oliveira, Rafael L.;  Duvoisin, Sergio, Jr.;  Jardine, Kolby J.;  Gu, Dasa;  Guenther, Alex B.;  McKinney, Karena A.;  Martins, Leila D.;  Souza, Rodrigo A. F.;  Martin, Scot T.
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
isoprene emissions  landscape heterogeneity  intermediate horizontal scales  Amazon tropical forest  UAV measurements  
Are disturbance gradients in neotropical ecosystems detected using rove beetles? A case study in the Brazilian Amazon 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2017, 405
作者:  Cajaiba, Reinaldo L.;  Perico, Eduardo;  Caron, Edilson;  Dalzochio, Marina S.;  Silva, Wully B.;  Santos, Mario
收藏  |  浏览/下载:16/0  |  提交时间:2019/04/09
Biodiversity  Disturbance indicators  Landscape heterogeneity  Neotropical forests  Insect  Brazilian Amazon  
Negative impacts of felling in exotic spruce plantations on moth diversity mitigated by remnants of deciduous tree cover 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2017, 404
作者:  Kirkpatrick, Lucinda;  Bailey, Sallie;  Park, Kirsty J.
收藏  |  浏览/下载:12/0  |  提交时间:2019/04/09
Moth  Lepidoptera  Abundance  Species richness  Plantation management  Landscape heterogeneity  
Vegetation change during 40 years of repeated managed wildfires in the Sierra Nevada, California 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2017, 402
作者:  Boisrame, Gabrielle F. S.;  Thompson, Sally E.;  Kelly, Maggi;  Cavalli, Julia;  Wilkin, Kate M.;  Stephens, Scott L.
收藏  |  浏览/下载:6/0  |  提交时间:2019/04/09
Wildfire  Heterogeneity  Landscape evolution  Mixed conifer  Yosemite  Landscape metrics  
Interacting effects of fire severity, time since fire and topography on vegetation structure after wildfire 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2017, 396
作者:  Bassett, Michelle;  Leonard, Steven W. J.;  Chia, Evelyn K.;  Clarke, Michael F.;  Bennett, Andrew F.
收藏  |  浏览/下载:5/0  |  提交时间:2019/04/09
Fire regime  Gully  Slope  Regeneration  Refuge  Landscape heterogeneity