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Ensuring meiotic DNA break formation in the mouse pseudoautosomal region 期刊论文
NATURE, 2020
作者:  Schuessler, R. X.;  Bekker, H.;  Brass, M.;  Cakir, H.;  Crespo Lopez-Urrutia, J. R.;  Door, M.;  Filianin, P.;  Harman, Z.;  Haverkort, M. W.;  Huang, W. J.;  Indelicato, P.;  Keitel, C. H.;  Koenig, C. M.;  Kromer, K.;  Mueller, M.;  Novikov, Y. N.;  Rischka, A.;  Schweiger, C.;  Sturm, S.;  Ulmer, S.;  Eliseev, S.;  Blaum, K.
收藏  |  浏览/下载:17/0  |  提交时间:2020/07/03

In mice, the pseudoautosomal region of the sex chromosomes undergoes a dynamic structural rearrangement to promote a high rate of DNA double-strand breaks and to ensure X-Y recombination.


Sex chromosomes in males of most eutherian mammals share only a small homologous segment, the pseudoautosomal region (PAR), in which the formation of double-strand breaks (DSBs), pairing and crossing over must occur for correct meiotic segregation(1,2). How cells ensure that recombination occurs in the PAR is unknown. Here we present a dynamic ultrastructure of the PAR and identify controlling cis- and trans-acting factors that make the PAR the hottest segment for DSB formation in the male mouse genome. Before break formation, multiple DSB-promoting factors hyperaccumulate in the PAR, its chromosome axes elongate and the sister chromatids separate. These processes are linked to heterochromatic mo-2 minisatellite arrays, and require MEI4 and ANKRD31 proteins but not the axis components REC8 or HORMAD1. We propose that the repetitive DNA sequence of the PAR confers unique chromatin and higher-order structures that are crucial for recombination. Chromosome synapsis triggers collapse of the elongated PAR structure and, notably, oocytes can be reprogrammed to exhibit spermatocyte-like levels of DSBs in the PAR simply by delaying or preventing synapsis. Thus, the sexually dimorphic behaviour of the PAR is in part a result of kinetic differences between the sexes in a race between the maturation of the PAR structure, formation of DSBs and completion of pairing and synapsis. Our findings establish a mechanistic paradigm for the recombination of sex chromosomes during meiosis.


  
Preparation of cyclohexene isotopologues and stereoisotopomers from benzene 期刊论文
NATURE, 2020, 581 (7808) : 288-+
作者:  Shimazaki, Yuya;  Schwartz, Ido;  Watanabe, Kenji;  Taniguchi, Takashi;  Kroner, Martin;  Imamoglu, Atac
收藏  |  浏览/下载:12/0  |  提交时间:2020/07/03

The hydrogen isotopes deuterium (D) and tritium (T) have become essential tools in chemistry, biology and medicine(1). Beyond their widespread use in spectroscopy, mass spectrometry and mechanistic and pharmacokinetic studies, there has been considerable interest in incorporating deuterium into drug molecules(1). Deutetrabenazine, a deuterated drug that is promising for the treatment of Huntington'  s disease(2), was recently approved by the United States'  Food and Drug Administration. The deuterium kinetic isotope effect, which compares the rate of a chemical reaction for a compound with that for its deuterated counterpart, can be substantial(1,3,4). The strategic replacement of hydrogen with deuterium can affect both the rate of metabolism and the distribution of metabolites for a compound(5), improving the efficacy and safety of a drug. The pharmacokinetics of a deuterated compound depends on the location(s) of deuterium. Although methods are available for deuterium incorporation at both early and late stages of the synthesis of a drug(6,7), these processes are often unselective and the stereoisotopic purity can be difficult to measure(7,8). Here we describe the preparation of stereoselectively deuterated building blocks for pharmaceutical research. As a proof of concept, we demonstrate a four-step conversion of benzene to cyclohexene with varying degrees of deuterium incorporation, via binding to a tungsten complex. Using different combinations of deuterated and proteated acid and hydride reagents, the deuterated positions on the cyclohexene ring can be controlled precisely. In total, 52 unique stereoisotopomers of cyclohexene are available, in the form of ten different isotopologues. This concept can be extended to prepare discrete stereoisotopomers of functionalized cyclohexenes. Such systematic methods for the preparation of pharmacologically active compounds as discrete stereoisotopomers could improve the pharmacological and toxicological properties of drugs and provide mechanistic information related to their distribution and metabolism in the body.


Cyclohexene isotopologues and stereoisotopomers with varying degrees of deuteration are formed by binding a tungsten complex to benzene, which facilitates the selective incorporation of deuterium into any position on the ring.


  
Quantifying Geochemical Processes of Arsenic Mobility in Groundwater From an Inland Basin Using a Reactive Transport Model 期刊论文
WATER RESOURCES RESEARCH, 2020, 56 (2)
作者:  Gao, Z. P.;  Jia, Y. F.;  Guo, H. M.;  Zhang, D.;  Zhao, B.
收藏  |  浏览/下载:9/0  |  提交时间:2020/07/02
arsenic  desorption  Hetao Basin  kinetic  organic matter  reductive dissolution  
Selective loading and processing of prespacers for precise CRISPR adaptation 期刊论文
NATURE, 2020
作者:  Liu, Guoxia;  Papa, Arianne;  Katchman, Alexander N.;  Zakharov, Sergey I.;  Roybal, Daniel;  Hennessey, Jessica A.;  Kushner, Jared;  Yang, Lin;  Chen, Bi-Xing;  Kushnir, Alexander;  Dangas, Katerina;  Gygi, Steven P.;  Pitt, Geoffrey S.;  Colecraft, Henry M.;  Ben-Johny, Manu;  Kalocsay, Marian;  Marx, Steven O.
收藏  |  浏览/下载:6/0  |  提交时间:2020/07/03

CRISPR-Cas immunity protects prokaryotes against invading genetic elements(1). It uses the highly conserved Cas1-Cas2 complex to establish inheritable memory (spacers)(2-5). How Cas1-Cas2 acquires spacers from foreign DNA fragments (prespacers) and integrates them into the CRISPR locus in the correct orientation is unclear(6,7). Here, using the high spatiotemporal resolution of single-molecule fluorescence, we show that Cas1-Cas2 selects precursors of prespacers from DNA in various forms-including single-stranded DNA and partial duplexes-in a manner that depends on both the length of the DNA strand and the presence of a protospacer adjacent motif (PAM) sequence. We also identify DnaQ exonucleases as enzymes that process the Cas1-Cas2-loaded prespacer precursors into mature prespacers of a suitable size for integration. Cas1-Cas2 protects the PAM sequence from maturation, which results in the production of asymmetrically trimmed prespacers and the subsequent integration of spacers in the correct orientation. Our results demonstrate the kinetic coordination of prespacer precursor selection and PAM trimming, providing insight into the mechanisms that underlie the integration of functional spacers in the CRISPR loci.


Cas1-Cas2 selects precursor prespacers from DNA fragments in a length- and PAM-sequence-dependent manner, and these precursors are trimmed by DnaQ exonucleases to enable integration into the CRISPR locus in the correct orientation.


  
Pacific Modulation of the North Atlantic Storm Track Response to Sudden Stratospheric Warming Events 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2020, 47 (2)
作者:  Afargan-Gerstman, Hilla;  Domeisen, Daniela I. V.
收藏  |  浏览/下载:7/0  |  提交时间:2020/07/02
sudden stratospheric warmings  storm track  downward impact  eddy kinetic energy  
Synthesis of rare sugar isomers through site-selective epimerization 期刊论文
NATURE, 2020: 403-+
作者:  Jackson, Hartland W.;  Fischer, Jana R.;  Zanotelli, Vito R. T.;  Ali, H. Raza;  Mechera, Robert;  Soysal, Savas D.;  Moch, Holger;  Muenst, Simone;  Varga, Zsuzsanna;  Weber, Walter P.;  Bodenmiller, Bernd
收藏  |  浏览/下载:15/0  |  提交时间:2020/07/03

Glycans have diverse physiological functions, ranging from energy storage and structural integrity to cell signalling and the regulation of intracellular processes(1). Although biomass-derived carbohydrates (such as d-glucose, d-xylose and d-galactose) are extracted on commercial scales, and serve as renewable chemical feedstocks and building blocks(2,3), there are hundreds of distinct monosaccharides that typically cannot be isolated from their natural sources and must instead be prepared through multistep chemical or enzymatic syntheses(4,5). These '  rare'  sugars feature prominently in bioactive natural products and pharmaceuticals, including antiviral, antibacterial, anticancer and cardiac drugs(6,7). Here we report the preparation of rare sugar isomers directly from biomass carbohydrates through site-selective epimerization reactions. Mechanistic studies establish that these reactions proceed under kinetic control, through sequential steps of hydrogen-atom abstraction and hydrogen-atom donation mediated by two distinct catalysts. This synthetic strategy provides concise and potentially extensive access to this valuable class of natural compounds.


Various rare sugars that cannot be isolated from natural sources are synthesized using light-driven epimerization, a process which may find application in other synthetic scenarios.


  
Midwinter Suppression of Storm Tracks in an Idealized Zonally Symmetric Setting 期刊论文
JOURNAL OF THE ATMOSPHERIC SCIENCES, 2020, 77 (1) : 297-313
作者:  Novak, Lenka;  Schneider, Tapio;  Ait-Chaalal, Farid
收藏  |  浏览/下载:6/0  |  提交时间:2020/07/02
Baroclinic flows  Eddies  Large-scale motions  Kinetic energy  Storm environments  General circulation models  
Periodical Dipolarization Processes in Earth's Magnetotail 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019, 46 (23) : 13640-13648
作者:  Huang, S. Y.;  Jiang, K.;  Fu, H. S.;  Yuan, Z. G.;  Deng, X. H.;  Li, H. M.;  Xu, S. B.;  He, L. H.;  Wei, Y. Y.;  Zhang, J.;  Zhang, Z. H.
收藏  |  浏览/下载:12/0  |  提交时间:2020/02/17
periodical dipolarization process  substorm  electron acceleration  kinetic effect  whistler wave  
Identifying STEVE's Magnetospheric Driver Using Conjugate Observations in the Magnetosphere and on the Ground 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019, 46 (22) : 12665-12674
作者:  Chu, Xiangning;  Malaspina, David;  Gallardo-Lacourt, Bea;  Liang, Jun;  Andersson, Laila;  Ma, Qianli;  Artemyev, Anton;  Liu, Jiang;  Ergun, Robert E.;  Thaller, Scott;  Akbari, Hassanali;  Zhao, Hong;  Larsen, Brian;  Reeves, Geoffrey;  Wygant, John;  Breneman, Aaron;  Tian, Sheng;  Connors, Martin;  Donovan, Eric;  Archer, William;  MacDonald, Elizabeth A.
收藏  |  浏览/下载:12/0  |  提交时间:2020/02/17
STEVE  subauroral ion drift  stable red auroral arc  plasmapause  aurora  kinetic Alfven wave  
Episodic Extrema of Surface Stress Energy Input to the Western Arctic Ocean Contributed to Step Changes of Freshwater Content in the Beaufort Gyre 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019, 46 (21) : 12173-12182
作者:  Zhong, Wenli;  Zhang, Jinlun;  Steele, Michael;  Zhao, Jinping;  Wang, Tao
收藏  |  浏览/下载:8/0  |  提交时间:2020/02/17
Beaufort Gyre  surface stress energy input  freshwater content  mechanical energy partition  potential energy  kinetic energy