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A plant genetic network for preventing dysbiosis in the phyllosphere 期刊论文
NATURE, 2020, 580 (7805) : 653-+
作者:  van den Brink, Susanne C.;  Alemany, Anna;  van Batenburg, Vincent;  Moris, Naomi;  Blotenburg, Marloes;  Vivie, Judith;  Baillie-Johnson, Peter;  Nichols, Jennifer;  Sonnen, Katharina F.;  Martinez Arias, Alfonso;  van Oudenaarden, Alexander
收藏  |  浏览/下载:59/0  |  提交时间:2020/07/03

Mutations in genes involved in immune signalling and vesicle trafficking cause defects in the leaf microbiome of Arabidopsis thaliana that result in damage to leaf tissues, suggesting mechanisms by which terrestrial plants control the level and diversity of endophytic phyllosphere microbiota.


The aboveground parts of terrestrial plants, collectively called the phyllosphere, have a key role in the global balance of atmospheric carbon dioxide and oxygen. The phyllosphere represents one of the most abundant habitats for microbiota colonization. Whether and how plants control phyllosphere microbiota to ensure plant health is not well understood. Here we show that the Arabidopsis quadruple mutant (min7 fls2 efr cerk1  hereafter, mfec)(1), simultaneously defective in pattern-triggered immunity and the MIN7 vesicle-trafficking pathway, or a constitutively activated cell death1 (cad1) mutant, carrying a S205F mutation in a membrane-attack-complex/perforin (MACPF)-domain protein, harbour altered endophytic phyllosphere microbiota and display leaf-tissue damage associated with dysbiosis. The Shannon diversity index and the relative abundance of Firmicutes were markedly reduced, whereas Proteobacteria were enriched in the mfec and cad1(S205F) mutants, bearing cross-kingdom resemblance to some aspects of the dysbiosis that occurs in human inflammatory bowel disease. Bacterial community transplantation experiments demonstrated a causal role of a properly assembled leaf bacterial community in phyllosphere health. Pattern-triggered immune signalling, MIN7 and CAD1 are found in major land plant lineages and are probably key components of a genetic network through which terrestrial plants control the level and nurture the diversity of endophytic phyllosphere microbiota for survival and health in a microorganism-rich environment.


  
No consistent effects of humans on animal genetic diversity worldwide 期刊论文
ECOLOGY LETTERS, 2019
作者:  Millette, Katie L.;  Fugere, Vincent;  Debyser, Chloe;  Greiner, Ariel;  Chain, Frederic J. J.;  Gonzalez, Andrew
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
Anthropocene  cytochrome c oxidase subunit I (COI)  human density  intraspecific genetic diversity  land use  nucleotide diversity  spatial scale  
Investigating the origin and genetic diversity of improved Eucalyptus grandis populations in Brazil 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 448: 130-138
作者:  Miranda, Aline C.;  da Silva, Paulo H. M.;  Moraes, Mario L. T.;  Lee, David J.;  Sebbenn, Alexandre M.
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27
Genetic diversity  Heritability  Inbreeding  Mating system  Tree breeding  
Genetic drift in range expansions is very sensitive to density dependence in dispersal and growth 期刊论文
ECOLOGY LETTERS, 2019, 22 (11) : 1817-1827
作者:  Gabriel Birzu;  Matin, Sakib;  Hallatschek, Oskar;  Korolev, Kirill S.
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27
Allee effect  demographic fluctuations  density dependence  diversity loss  founder effect  genetic drift  population pressure  pulled invasions  pushed invasions  reaction-diffusion  
Plant domestication disrupts biodiversity effects across major crop types 期刊论文
ECOLOGY LETTERS, 2019, 22 (9) : 1472-1482
作者:  Chacon-Labella, Julia;  Garcia Palacios, Pablo;  Matesanz, Silvia;  Schob, Christian;  Milla, Ruben
收藏  |  浏览/下载:5/0  |  提交时间:2019/11/27
Biodiversity-ecosystem functioning  complementarity effects  crop ecology  diversity-productivity relationship  evolution  functional traits  genetic variation  over-yielding  polycultures  selection effects  
A genome-wide search for local adaptation in a terrestrial-breeding frog reveals vulnerability to climate change 期刊论文
GLOBAL CHANGE BIOLOGY, 2019, 25 (9) : 3151-3162
作者:  Cummins, Deanne;  Kennington, W. Jason;  Rudin-Bitterli, Tabitha;  Mitchell, Nicola J.
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
amphibian  climate change  genetic diversity  genome-wide  local adaptation  Pseudophryne guentheri  SNP  
Habitat fragmentation reduces plant progeny quality: a global synthesis 期刊论文
ECOLOGY LETTERS, 2019, 22 (7) : 1163-1173
作者:  Aguilar, Ramiro;  Jacob Cristobal-Perez, Edson;  Balvino-Olvera, Francisco Javier;  Aguilar-Aguilar, Maria de Jesus;  Aguirre-Acosta, Natalia;  Ashworth, Lorena;  Lobo, Jorge A.;  Marten-Rodriguez, Silvana;  Fuchs, Eric J.;  Sanchez-Montoya, Gumersindo;  Bernardello, Gabriel;  Quesada, Mauricio
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27
Genetic diversity  germination  growth  inbreeding  mating patterns  offspring performance  plant-pollination interactions  progeny vigour  seedling  sexual plant reproduction  survival  
Framework of multidimensional macrobenthos biodiversity to evaluate ecological restoration in wetlands 期刊论文
ENVIRONMENTAL RESEARCH LETTERS, 2019, 14 (5)
作者:  Li, Xiaoxiao;  Yang, Wei;  Sun, Tao;  Su, Liya
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/26
multidimensional index  macrobenthos biodiversity  ecological restoration  holistic biodiversity  genetic diversity  taxonomic diversity  functional diversity  
Guidelines for seed collection of Araucaria angustifolia (Bertol.) Kuntze: A genetic, demographic and geographic approach 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 438: 10-17
作者:  Montagna, Tiago;  Lauterjung, Miguel Busarello;  Freitas da Costa, Newton Clovis;  Bernardi, Alison Paulo;  Candido-Ribeiro, Rafael;  dos Reis, Mauricio Sedrez
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/26
Araucaria forest  Effective population size  Fragmentation  Genetic diversity  Restoration  
Population dynamics and geographical distribution of the gypsy moth, Lymantria dispar, in Japan 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 434: 154-164
作者:  Inoue, Maki N.;  Suzuki-Ohno, Yukari;  Haga, Yuri;  Aarai, Hiroshi;  Sano, Tomoya;  Martemyanov, Vyacheslav V.;  Kunimi, Yasuhisa
收藏  |  浏览/下载:4/0  |  提交时间:2019/04/09
Genetic diversity  Gypsy moth  Mitochondria DNA  Maxent  Outbreak  Population dynamics