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The arms race between bacteria and their phage foes 期刊论文
NATURE, 2020, 577 (7790) : 327-336
作者:  Hirschey, Matthew
收藏  |  浏览/下载:20/0  |  提交时间:2020/07/03

Bacteria are under immense evolutionary pressure from their viral invaders-bacteriophages. Bacteria have evolved numerous immune mechanisms, both innate and adaptive, to cope with this pressure. The discovery and exploitation of CRISPR-Cas systems have stimulated a resurgence in the identification and characterization of anti-phage mechanisms. Bacteriophages use an extensive battery of counter-defence strategies to co-exist in the presence of these diverse phage defence mechanisms. Understanding the dynamics of the interactions between these microorganisms has implications for phage-based therapies, microbial ecology and evolution, and the development of new biotechnological tools. Here we review the spectrum of anti-phage systems and highlight their evasion by bacteriophages.


  
Late Cretaceous neornithine from Europe illuminates the origins of crown birds 期刊论文
NATURE, 2020, 579 (7799) : 397-+
作者:  Shao, Zhengping;  Flynn, Ryan A.;  Crowe, Jennifer L.;  Zhu, Yimeng;  Liang, Jialiang;  Jiang, Wenxia;  Aryan, Fardin;  Aoude, Patrick;  Bertozzi, Carolyn R.;  Estes, Verna M.;  Lee, Brian J.;  Bhagat, Govind;  Zha, Shan;  Calo, Eliezer
收藏  |  浏览/下载:15/0  |  提交时间:2020/05/13

Our understanding of the earliest stages of crown bird evolution is hindered by an exceedingly sparse avian fossil record from the Mesozoic era. The most ancient phylogenetic divergences among crown birds are known to have occurred in the Cretaceous period(1-3), but stem-lineage representatives of the deepest subclades of crown birds-Palaeognathae (ostriches and kin), Galloanserae (landfowl and waterfowl) and Neoaves (all other extant birds)-are unknown from the Mesozoic era. As a result, key questions related to the ecology(4,5), biogeography(3,6,7) and divergence times(1,8-10) of ancestral crown birds remain unanswered. Here we report a new Mesozoic fossil that occupies a position close to the last common ancestor of Galloanserae and fills a key phylogenetic gap in the early evolutionary history of crown birds(10,11). Asteriornis maastrichtensis, gen. et sp. nov., from the Maastrichtian age of Belgium (66.8-66.7 million years ago), is represented by a nearly complete, three-dimensionally preserved skull and associated postcranial elements. The fossil represents one of the only well-supported crown birds from the Mesozoic era(12), and is the first Mesozoic crown bird with well-represented cranial remains. Asteriornis maastrichtensis exhibits a previously undocumented combination of galliform (landfowl)-like and anseriform (waterfowl)-like features, and its presence alongside a previously reported Ichthyornis-like taxon from the same locality(13) provides direct evidence of the co-occurrence of crown birds and avialan stem birds. Its occurrence in the Northern Hemisphere challenges biogeographical hypotheses of a Gondwanan origin of crown birds(3), and its relatively small size and possible littoral ecology may corroborate proposed ecological filters(4,5,9) that influenced the persistence of crown birds through the end-Cretaceous mass extinction.


A newly discovered fossil from the Cretaceous of Belgium is the oldest modern bird ever found, showing a unique combination of features and suggesting attributes shared by avian survivors of the end-Cretaceous extinction.


  
Evolutionary temperature compensation of carbon fixation in marine phytoplankton 期刊论文
ECOLOGY LETTERS, 2020, 23 (4) : 722-733
作者:  Barton, Samuel;  Jenkins, James;  Buckling, Angus;  Schaum, C. -Elisa;  Smirnoff, Nicholas;  Raven, John A.;  Yvon-Durocher, Gabriel
收藏  |  浏览/下载:11/0  |  提交时间:2020/07/02
climate change  evolutionary ecology  metabolism  phytoplankton physiology  thermal performance curves  
Non-consumptive effects of predation: does perceived risk strengthen the genetic integration of behaviour and morphology in stickleback? 期刊论文
ECOLOGY LETTERS, 2019
作者:  Dingemanse, Niels J.;  Barber, Iain;  Dochtermann, Ned A.
收藏  |  浏览/下载:4/0  |  提交时间:2019/11/27
Behavioural ecology  evolutionary characters  functional integration  G-matrix evolution  gene-environment interactions  modularity  morphology  personality  plasticity integration  predation  
Size-abundance rules? Evolution changes scaling relationships between size, metabolism and demography 期刊论文
ECOLOGY LETTERS, 2019, 22 (9) : 1407-1416
作者:  Malerba, Martino E.;  Marshall, Dustin J.
收藏  |  浏览/下载:4/0  |  提交时间:2019/11/27
Allometry  artificial selection  Centre for Geometric Biology  demographic parameters  evolutionary size-shift  experimental evolution  metabolic ecology  metabolic energy  scaling  
Evolutionary response to coexistence with close relatives: increased resistance against specialist herbivores without cost for climatic-stress resistance 期刊论文
ECOLOGY LETTERS, 2019, 22 (8) : 1285-1296
作者:  Pihain, Mickael;  Gerhold, Pille;  Ducousso, Alexis;  Prinzing, Andreas
收藏  |  浏览/下载:5/0  |  提交时间:2019/11/27
Adaptation  associational resistance  climatic-stress resistance  eco-evolutionary feedback  ecomorphology and chemical ecology  galls  ectophages and miners  phylogenetic diversity  multifunctional resistance  Sessile Oak (Quercus petraea)  temperate forests  
The measurement of coevolution in the wild 期刊论文
ECOLOGY LETTERS, 2019, 22 (4) : 717-725
作者:  BobWeek;  Nuismer, Scott L.
收藏  |  浏览/下载:1/0  |  提交时间:2019/04/09
Coevolution  coevolutionary arms race  evolutionary ecology  maximum likelihood  quantitative genetics  
Diversification and functional evolution of reef fish feeding guilds 期刊论文
ECOLOGY LETTERS, 2019, 22 (4) : 572-582
作者:  Gajdzik, Laura;  Aguilar-Medrano, Rosalia;  Frederich, Bruno
收藏  |  浏览/下载:4/0  |  提交时间:2019/04/09
Coral reef fish  ecological diversity  evolutionary rate  functional diversity  functional ecology  Labridae  Pomacentridae  trait evolution  versatility  
Intraspecific trait variation and trade-offs within and across populations of a toxic dinoflagellate 期刊论文
ECOLOGY LETTERS, 2018, 21 (10) : 1561-1571
作者:  Brandenburg, Karen M.;  Wohlrab, Sylke;  John, Uwe;  Kremp, Anke;  Jerney, Jacqueline;  Krock, Bernd;  Van de Waal, Dedmer B.
收藏  |  浏览/下载:10/0  |  提交时间:2019/04/09
Eco-evolutionary dynamics  biodiversity  population ecology  harmful algal blooms  Alexandrium ostenfeldii  
Towards a predictive model of species interaction beta diversity 期刊论文
ECOLOGY LETTERS, 2018, 21 (9) : 1299-1310
作者:  Graham, Catherine H.;  Weinstein, Ben G.
收藏  |  浏览/下载:4/0  |  提交时间:2019/04/09
Bayesian  dissimilarity  evolutionary history  interaction beta-diversity  interaction turnover  network ecology  prediction  rewiring  scale  species turnover