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A Galactic-scale gas wave in the solar neighbourhood 期刊论文
NATURE, 2020, 578 (7794) : 237-+
作者:  Alves, Joao;  Zucker, Catherine;  Goodman, Alyssa A.;  Speagle, Joshua S.;  Meingast, Stefan;  Robitaille, Thomas;  Finkbeiner, Douglas P.;  Schlafly, Edward F.;  Green, Gregory M.
收藏  |  浏览/下载:37/0  |  提交时间:2020/07/03

The three-dimensional structure of all cloud complexes in the solar neighbourhood is revealed, showing a narrow and coherent 2.7-kpc arrangement of dense gas, in disagreement with the Gould Belt model.


For the past 150 years, the prevailing view of the local interstellar medium has been based on a peculiarity known as the Gould Belt(1-4), an expanding ring of young stars, gas and dust, tilted about 20 degrees to the Galactic plane. However, the physical relationship between local gas clouds has remained unknown because the accuracy in distance measurements to such clouds is of the same order as, or larger than, their sizes(5-7). With the advent of large photometric surveys(8) and the astrometric survey(9), this situation has changed(10). Here we reveal the three-dimensional structure of all local cloud complexes. We find a narrow and coherent 2.7-kiloparsec arrangement of dense gas in the solar neighbourhood that contains many of the clouds thought to be associated with the Gould Belt. This finding is inconsistent with the notion that these clouds are part of a ring, bringing the Gould Belt model into question. The structure comprises the majority of nearby star-forming regions, has an aspect ratio of about 1:20 and contains about three million solar masses of gas. Remarkably, this structure appears to be undulating, and its three-dimensional shape is well described by a damped sinusoidal wave on the plane of the Milky Way with an average period of about 2 kiloparsecs and a maximum amplitude of about 160 parsecs.


  
Parental-to-embryo switch of chromosome organization in early embryogenesis 期刊论文
NATURE, 2020: 142-+
作者:  Kim, Eugene;  Kerssemakers, Jacob;  Shaltiel, Indra A.;  Haering, Christian H.;  Dekker, Cees
收藏  |  浏览/下载:30/0  |  提交时间:2020/07/03

Single-cell allelic HiC analysis, combined with allelic gene expression and chromatin states, reveals parent-of-origin-specific dynamics of chromosome organization and gene expression during mouse preimplantation development.


Paternal and maternal epigenomes undergo marked changes after fertilization(1). Recent epigenomic studies have revealed the unusual chromatin landscapes that are present in oocytes, sperm and early preimplantation embryos, including atypical patterns of histone modifications(2-4) and differences in chromosome organization and accessibility, both in gametes(5-8) and after fertilization(5,8-10). However, these studies have led to very different conclusions: the global absence of local topological-associated domains (TADs) in gametes and their appearance in the embryo(8,9) versus the pre-existence of TADs and loops in the zygote(5,11). The questions of whether parental structures can be inherited in the newly formed embryo and how these structures might relate to allele-specific gene regulation remain open. Here we map genomic interactions for each parental genome (including the X chromosome), using an optimized single-cell high-throughput chromosome conformation capture (HiC) protocol(12,13), during preimplantation in the mouse. We integrate chromosome organization with allelic expression states and chromatin marks, and reveal that higher-order chromatin structure after fertilization coincides with an allele-specific enrichment of methylation of histone H3 at lysine 27. These early parental-specific domains correlate with gene repression and participate in parentally biased gene expression-including in recently described, transiently imprinted loci(14). We also find TADs that arise in a non-parental-specific manner during a second wave of genome assembly. These de novo domains are associated with active chromatin. Finally, we obtain insights into the relationship between TADs and gene expression by investigating structural changes to the paternal X chromosome before and during X chromosome inactivation in preimplantation female embryos(15). We find that TADs are lost as genes become silenced on the paternal X chromosome but linger in regions that escape X chromosome inactivation. These findings demonstrate the complex dynamics of three-dimensional genome organization and gene expression during early development.


  
A claustrum in reptiles and its role in slow-wave sleep 期刊论文
NATURE, 2020, 578 (7795) : 413-+
作者:  Loubeyre, Paul;  Occelli, Florent;  Dumas, Paul
收藏  |  浏览/下载:32/0  |  提交时间:2020/07/03

The mammalian claustrum, owing to its widespread connectivity with other forebrain structures, has been hypothesized to mediate functions that range from decision-making to consciousness(1). Here we report that a homologue of the claustrum, identified by single-cell transcriptomics and viral tracing of connectivity, also exists in a reptile-the Australian bearded dragon Pogona vitticeps. In Pogona, the claustrum underlies the generation of sharp waves during slow-wave sleep. The sharp waves, together with superimposed high-frequency ripples(2), propagate to the entire neighbouring pallial dorsal ventricular ridge (DVR). Unilateral or bilateral lesions of the claustrum suppress the production of sharp-wave ripples during slow-wave sleep in a unilateral or bilateral manner, respectively, but do not affect the regular and rapidly alternating sleep rhythm that is characteristic of sleep in this species(3). The claustrum is thus not involved in the generation of the sleep rhythm itself. Tract tracing revealed that the reptilian claustrum projects widely to a variety of forebrain areas, including the cortex, and that it receives converging inputs from, among others, areas of the mid- and hindbrain that are known to be involved in wake-sleep control in mammals(4-6). Periodically modulating the concentration of serotonin in the claustrum, for example, caused a matching modulation of sharp-wave production there and in the neighbouring DVR. Using transcriptomic approaches, we also identified a claustrum in the turtle Trachemys scripta, a distant reptilian relative of lizards. The claustrum is therefore an ancient structure that was probably already present in the brain of the common vertebrate ancestor of reptiles and mammals. It may have an important role in the control of brain states owing to the ascending input it receives from the mid- and hindbrain, its widespread projections to the forebrain and its role in sharp-wave generation during slow-wave sleep.


A structure homologous to the mammalian claustrum exists in reptiles and has a role in generating sharp waves in the brain during slow-wave sleep.


  
Frequency-Dependent P Wave Polarization and Its Subwavelength Near-Surface Depth Sensitivity 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2019
作者:  Park, Sunyoung;  Tsai, Victor C.;  Ishii, Miaki
收藏  |  浏览/下载:21/0  |  提交时间:2020/02/17
body-wave polarization  depth sensitivity  near-surface structure  site characterization  seismic hazard assessment  Japan  
The role of the Indian Summer Monsoon variability on Arabian Peninsula summer climate 期刊论文
CLIMATE DYNAMICS, 2019, 52: 3389-3404
作者:  Attada, Raju;  Dasari, Hari Prasad;  Parekh, Anant;  Chowdary, Jasti S.;  Langodan, Sabique;  Knio, Omar;  Hoteit, Ibrahim
收藏  |  浏览/下载:18/0  |  提交时间:2019/11/26
Arabian Peninsula  Indian Summer Monsoon  Warm core structure  Rossby wave  
The Collaborative Seismic Earth Model: Generation 1 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2018, 45 (9) : 4007-4016
作者:  Fichtner, Andreas;  van Herwaarden, Dirk-Philip;  Afanasiev, Michael;  Simute, Saule;  Krischer, Lion;  Cubuk-Sabuncu, Yesim;  Taymaz, Tuncay;  Colli, Lorenzo;  Saygin, Erdinc;  Villasenor, Antonio;  Trampert, Jeannot;  Cupillard, Paul;  Bunge, Hans-Peter;  Igel, Heiner
收藏  |  浏览/下载:24/0  |  提交时间:2019/04/09
inverse theory  seismology  wave propagation  tomography  Earth structure  computational geophysics  
Another look on the structure of mountain waves: A spectral perspective 期刊论文
ATMOSPHERIC RESEARCH, 2017, 191
作者:  Xu, Xin;  Shu, Shoujuan;  Wang, Yuan
收藏  |  浏览/下载:16/0  |  提交时间:2019/04/09
Gravity waves  Wave structure  Spectral analysis