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Large and seasonally varying biospheric CO2 fluxes in the Los Angeles megacity revealed by atmospheric radiocarbon 期刊论文
Proceedings of the National Academy of Sciences, 2020
作者:  John B. Miller;  Scott J. Lehman;  Kristal R. Verhulst;  Charles E. Miller;  Riley M. Duren;  Vineet Yadav;  Sally Newman;  Christopher D. Sloop
收藏  |  浏览/下载:8/0  |  提交时间:2020/10/20
Origin of complexity in haemoglobin evolution 期刊论文
NATURE, 2020
作者:  Cheema, Suraj S.;  Kwon, Daewoong;  Shanker, Nirmaan;  dos Reis, Roberto;  Hsu, Shang-Lin;  Xiao, Jun;  Zhang, Haigang;  Wagner, Ryan;  Datar, Adhiraj;  McCarter, Margaret R.;  Serrao, Claudy R.;  Yadav, Ajay K.;  Karbasian, Golnaz;  Hsu, Cheng-Hsiang;  Tan, Ava J.;  Wang, Li-Chen;  Thakare, Vishal;  Zhang, Xiang;  Mehta, Apurva;  Karapetrova, Evguenia;  Chopdekar, Rajesh, V;  Shafer, Padraic;  Arenholz, Elke;  Hu, Chenming;  Proksch, Roger;  Ramesh, Ramamoorthy;  Ciston, Jim;  Salahuddin, Sayeef
收藏  |  浏览/下载:50/0  |  提交时间:2020/07/03

Most proteins associate into multimeric complexes with specific architectures(1,2), which often have functional properties such as cooperative ligand binding or allosteric regulation(3). No detailed knowledge is available about how any multimer and its functions arose during evolution. Here we use ancestral protein reconstruction and biophysical assays to elucidate the origins of vertebrate haemoglobin, a heterotetramer of paralogous alpha- and beta-subunits that mediates respiratory oxygen transport and exchange by cooperatively binding oxygen with moderate affinity. We show that modern haemoglobin evolved from an ancient monomer and characterize the historical '  missing link'  through which the modern tetramer evolved-a noncooperative homodimer with high oxygen affinity that existed before the gene duplication that generated distinct alpha- and beta-subunits. Reintroducing just two post-duplication historical substitutions into the ancestral protein is sufficient to cause strong tetramerization by creating favourable contacts with more ancient residues on the opposing subunit. These surface substitutions markedly reduce oxygen affinity and even confer cooperativity, because an ancient linkage between the oxygen binding site and the multimerization interface was already an intrinsic feature of the protein'  s structure. Our findings establish that evolution can produce new complex molecular structures and functions via simple genetic mechanisms that recruit existing biophysical features into higher-level architectures.


Experimental analysis of reconstructed ancestral globins reveals that haemoglobin'  s complex tetrameric structure and oxygen-binding functions evolved by simple genetic and biophysical mechanisms.


  
California鈥檚 methane super-emitters 期刊论文
Nature, 2019, 575: 180-184
作者:  Riley M. Duren;  Andrew K. Thorpe;  Kelsey T. Foster;  Talha Rafiq;  Francesca M. Hopkins;  Vineet Yadav;  Brian D. Bue;  David R. Thompson;  Stephen Conley;  Nadia K. Colombi;  Christian Frankenberg;  Ian B. McCubbin;  Michael L. Eastwood;  Matthias Falk;  Jorn D. Herner;  Bart E. Croes;  Robert O. Green;  Charles E. Miller
收藏  |  浏览/下载:15/0  |  提交时间:2019/11/27
A second source of repeating fast radio bursts 期刊论文
NATURE, 2019, 566 (7743) : 235-+
作者:  Amiri, M.;  Bandura, K.;  Bhardwaj, M.;  Boubel, P.;  Boyce, M. M.;  Boyle, P. J.;  Brar, C.;  Burhanpurkar, M.;  Cassanelli, T.;  Chawla, P.;  Cliche, J. F.;  Cubranic, D.;  Deng, M.;  Denman, N.;  Dobbs, M.;  Fandino, M.;  Fonseca, E.;  Gaensler, B. M.;  Gilbert, A. J.;  Gill, A.;  Giri, U.;  Good, D. C.;  Halpern, M.;  Hanna, D. S.;  Hill, A. S.;  Hinshaw, G.;  Hofer, C.;  Josephy, A.;  Kaspi, V. M.;  Landecker, T. L.;  Lang, D. A.;  Lin, H-H.;  Masui, K. W.;  Mckinven, R.;  Mena-Parra, J.;  Merryfield, M.;  Michilli, D.;  Milutinovic, N.;  Moatti, C.;  Naidu, A.;  Newburgh, L. B.;  Ng, C.;  Patel, C.;  Pen, U.;  Pinsonneault-Marotte, T.;  Pleunis, Z.;  Rafiei-Ravandi, M.;  Rahman, M.;  Ransom, S. M.;  Renard, A.;  Scholz, P.;  Shaw, J. R.;  Siegel, S. R.;  Smith, K. M.;  Stairs, I. H.;  Tendulkar, S. P.;  Tretyakov, I.;  Vanderlinde, K.;  Yadav, P.
收藏  |  浏览/下载:14/0  |  提交时间:2019/11/27
Actionable perturbations of damage responses by TCL1/ATM and epigenetic lesions form the basis of T-PLL 期刊论文
NATURE COMMUNICATIONS, 2018, 9
作者:  Schrader, A.;  Crispatzu, G.;  Oberbeck, S.;  Mayer, P.;  Putzer, S.;  von Jan, J.;  Vasyutina, E.;  Warner, K.;  Weit, N.;  Pflug, N.;  Braun, T.;  Andersson, E. I.;  Yadav, B.;  Riabinska, A.;  Maurer, B.;  Ferreira, M. S. Ventura;  Beier, F.;  Altmueller, J.;  Lanasa, M.;  Herling, C. D.;  Haferlach, T.;  Stilgenbauer, S.;  Hopfinger, G.;  Peifer, M.;  Bruemmendorf, T. H.;  Nuernberg, P.;  Elenitoba-Johnson, K. S. J.;  Zha, S.;  Hallek, M.;  Moriggl, R.;  Reinhardt, H. C.;  Stern, M. -H.;  Mustjoki, S.;  Newrzela, S.;  Frommolt, P.;  Herling, M.
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27