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A lysosomal switch triggers proteostasis renewal in the immortal C. elegans germ lineage (vol 551, pg 629, 2017) 期刊论文
NATURE, 2020, 580 (7802) : E5-E5
作者:  Lu, Zhihao;  Zou, Jianling;  Li, Shuang;  Topper, Michael J.;  Tao, Yong;  Zhang, Hao;  Jiao, Xi;  Xie, Wenbing;  Kong, Xiangqian;  Vaz, Michelle;  Li, Huili;  Cai, Yi;  Xia, Limin;  Huang, Peng;  Rodgers, Kristen;  Lee, Beverly;  Riemer, Joanne B.;  Day, Chi-Ping;  Yen, Ray-Whay Chiu;  Cui, Ying;  Wang, Yujiao;  Wang, Yanni;  Zhang, Weiqiang;  Easwaran, Hariharan;  Hulbert, Alicia;  Kim, KiBem;  Juergens, Rosalyn A.;  Yang, Stephen C.;  Battafarano, Richard J.;  Bush, Errol L.;  Broderick, Stephen R.;  Cattaneo, Stephen M.;  Brahmer, Julie R.;  Rudin, Charles M.;  Wrangle, John;  Mei, Yuping;  Kim, Young J.;  Zhang, Bin;  Wang, Ken Kang-Hsin;  Forde, Patrick M.;  Margolick, Joseph B.;  Nelkin, Barry D.;  Zahnow, Cynthia A.;  Pardoll, Drew M.;  Housseau, Franck;  Baylin, Stephen B.;  Shen, Lin;  Brock, Malcolm V.
收藏  |  浏览/下载:26/0  |  提交时间:2020/07/03
Video-based AI for beat-to-beat assessment of cardiac function 期刊论文
NATURE, 2020, 580 (7802) : 252-+
作者:  Pleguezuelos-Manzano, Cayetano;  Puschhof, Jens;  Huber, Axel Rosendahl;  van Hoeck, Arne;  Wood, Henry M.;  Nomburg, Jason;  Gurjao, Carino;  Manders, Freek;  Dalmasso, Guillaume;  Stege, Paul B.;  Paganelli, Fernanda L.;  Geurts, Maarten H.;  Beumer, Joep;  Mizutani, Tomohiro;  Miao, Yi;  van der Linden, Reinier;  van der Elst, Stefan;  Garcia, K. Christopher;  Top, Janetta;  Willems, Rob J. L.;  Giannakis, Marios;  Bonnet, Richard;  Quirke, Phil;  Meyerson, Matthew;  Cuppen, Edwin;  van Boxtel, Ruben;  Clevers, Hans
收藏  |  浏览/下载:116/0  |  提交时间:2020/07/03

A video-based deep learning algorithm-EchoNet-Dynamic-accurately identifies subtle changes in ejection fraction and classifies heart failure with reduced ejection fraction using information from multiple cardiac cycles.


Accurate assessment of cardiac function is crucial for the diagnosis of cardiovascular disease(1), screening for cardiotoxicity(2) and decisions regarding the clinical management of patients with a critical illness(3). However, human assessment of cardiac function focuses on a limited sampling of cardiac cycles and has considerable inter-observer variability despite years of training(4,5). Here, to overcome this challenge, we present a video-based deep learning algorithm-EchoNet-Dynamic-that surpasses the performance of human experts in the critical tasks of segmenting the left ventricle, estimating ejection fraction and assessing cardiomyopathy. Trained on echocardiogram videos, our model accurately segments the left ventricle with a Dice similarity coefficient of 0.92, predicts ejection fraction with a mean absolute error of 4.1% and reliably classifies heart failure with reduced ejection fraction (area under the curve of 0.97). In an external dataset from another healthcare system, EchoNet-Dynamic predicts the ejection fraction with a mean absolute error of 6.0% and classifies heart failure with reduced ejection fraction with an area under the curve of 0.96. Prospective evaluation with repeated human measurements confirms that the model has variance that is comparable to or less than that of human experts. By leveraging information across multiple cardiac cycles, our model can rapidly identify subtle changes in ejection fraction, is more reproducible than human evaluation and lays the foundation for precise diagnosis of cardiovascular disease in real time. As a resource to promote further innovation, we also make publicly available a large dataset of 10,030 annotated echocardiogram videos.


  
Nightside condensation of iron in an ultrahot giant exoplanet 期刊论文
NATURE, 2020, 580 (7805) : 597-+
作者:  Lu, Zhihao;  Zou, Jianling;  Li, Shuang;  Topper, Michael J.;  Tao, Yong;  Zhang, Hao;  Jiao, Xi;  Xie, Wenbing;  Kong, Xiangqian;  Vaz, Michelle;  Li, Huili;  Cai, Yi;  Xia, Limin;  Huang, Peng;  Rodgers, Kristen;  Lee, Beverly;  Riemer, Joanne B.;  Day, Chi-Ping;  Yen, Ray-Whay Chiu;  Cui, Ying;  Wang, Yujiao;  Wang, Yanni;  Zhang, Weiqiang;  Easwaran, Hariharan;  Hulbert, Alicia;  Kim, KiBem;  Juergens, Rosalyn A.;  Yang, Stephen C.;  Battafarano, Richard J.;  Bush, Errol L.;  Broderick, Stephen R.;  Cattaneo, Stephen M.;  Brahmer, Julie R.;  Rudin, Charles M.;  Wrangle, John;  Mei, Yuping;  Kim, Young J.;  Zhang, Bin;  Wang, Ken Kang-Hsin;  Forde, Patrick M.;  Margolick, Joseph B.;  Nelkin, Barry D.;  Zahnow, Cynthia A.;  Pardoll, Drew M.;  Housseau, Franck;  Baylin, Stephen B.;  Shen, Lin;  Brock, Malcolm V.
收藏  |  浏览/下载:57/0  |  提交时间:2020/07/03

Ultrahot giant exoplanets receive thousands of times Earth'  s insolation(1,2). Their high-temperature atmospheres (greater than 2,000 kelvin) are ideal laboratories for studying extreme planetary climates and chemistry(3-5). Daysides are predicted to be cloud-free, dominated by atomic species(6) and much hotter than nightsides(5,7,8). Atoms are expected to recombine into molecules over the nightside(9), resulting in different day and night chemistries. Although metallic elements and a large temperature contrast have been observed(10-14), no chemical gradient has been measured across the surface of such an exoplanet. Different atmospheric chemistry between the day-to-night ('  evening'  ) and night-to-day ('  morning'  ) terminators could, however, be revealed as an asymmetric absorption signature during transit(4,7,15). Here we report the detection of an asymmetric atmospheric signature in the ultrahot exoplanet WASP-76b. We spectrally and temporally resolve this signature using a combination of high-dispersion spectroscopy with a large photon-collecting area. The absorption signal, attributed to neutral iron, is blueshifted by -11 +/- 0.7 kilometres per second on the trailing limb, which can be explained by a combination of planetary rotation and wind blowing from the hot dayside(16). In contrast, no signal arises from the nightside close to the morning terminator, showing that atomic iron is not absorbing starlight there. We conclude that iron must therefore condense during its journey across the nightside.


Absorption lines of iron in the dayside atmosphere of an ultrahot giant exoplanet disappear after travelling across the nightside, showing that the iron has condensed during its travel.


  
Pathway paradigms revealed from the genetics of inflammatory bowel disease 期刊论文
NATURE, 2020, 578 (7796) : 527-539
作者:  Yu, Kwanha;  Lin, Chia-Ching John;  Hatcher, Asante;  Lozzi, Brittney;  Kong, Kathleen;  Huang-Hobbs, Emmet;  Cheng, Yi-Ting;  Beechar, Vivek B.;  Zhu, Wenyi;  Zhang, Yiqun;  Chen, Fengju;  Mills, Gordon B.;  Mohila, Carrie A.;  Creighton, Chad J.;  Noebels, Jeffrey L.;  Scott, Kenneth L.;  Deneen, Benjamin
收藏  |  浏览/下载:7/0  |  提交时间:2020/07/03

Inflammatory bowel disease (IBD) is a complex genetic disease that is instigated and amplified by the confluence of multiple genetic and environmental variables that perturb the immune-microbiome axis. The challenge of dissecting pathological mechanisms underlying IBD has led to the development of transformative approaches in human genetics and functional genomics. Here we describe IBD as a model disease in the context of leveraging human genetics to dissect interactions in cellular and molecular pathways that regulate homeostasis of the mucosal immune system. Finally, we synthesize emerging insights from multiple experimental approaches into pathway paradigms and discuss future prospects for disease-subtype classification and therapeutic intervention.


This Review examines inflammatory bowel disease in the context of human genetics studies that help to identify pathways that regulate homeostasis of the mucosal immune system and discusses future prospects for disease-subtype classification and therapeutic intervention.


  
Contrasting effects of CO2 fertilization, land-use change and warming on seasonal amplitude of Northern Hemisphere CO2 exchange 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2019, 19 (19) : 12361-12375
作者:  Bastos, Ana;  Ciais, Philippe;  Chevallier, Frederic;  Roedenbeck, Christian;  Ballantyne, Ashley P.;  Maignan, Fabienne;  Yin, Yi;  Fernandez-Martinez, Marcos;  Friedlingstein, Pierre;  Penuelas, Josep;  Piao, Shilong L.;  Sitch, Stephen;  Smith, William K.;  Wang, Xuhui;  Zhu, Zaichun;  Haverd, Vanessa;  Kato, Etsushi;  Jain, Atul K.;  Lienert, Sebastian;  Lombardozzi, Danica;  Nabel, Julia E. M. S.;  Peylin, Philippe;  Poulter, Benjamin;  Zhu, Dan
收藏  |  浏览/下载:12/0  |  提交时间:2019/11/27
The influence of simulated surface dust lofting and atmospheric loading on radiative forcing 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2019, 19 (15) : 10279-10301
作者:  Saleeby, Stephen M.;  van den Heever, Susan C.;  Bukowski, Jennie;  Walker, Annette L.;  Solbrig, Jeremy E.;  Atwood, Samuel A.;  Bian, Qijing;  Kreidenweis, Sonia M.;  Wang, Yi;  Wang, Jun;  Miller, Steven D.
收藏  |  浏览/下载:7/0  |  提交时间:2019/11/27
CRISPR-mediated activation of a promoter or enhancer rescues obesity caused by haploinsufficiency 期刊论文
SCIENCE, 2019, 363 (6424) : 246-+
作者:  Matharu, Navneet;  Rattanasopha, Sawitree;  Tamura, Serena;  Maliskova, Lenka;  Wang, Yi;  Bernard, Adelaide;  Hardin, Aaron;  Eckalbar, Walter L.;  Vaisse, Christian;  Ahituv, Nadav
收藏  |  浏览/下载:5/0  |  提交时间:2019/11/27
The earliest human occupation of the high-altitude Tibetan Plateau 40 thousand to 30 thousand years ago 期刊论文
SCIENCE, 2018, 362 (6418) : 1049-+
作者:  Zhang, X. L.;  Ha, B. B.;  Wang, S. J.;  Chen, Z. J.;  Ge, J. Y.;  Long, H.;  He, W.;  Da, W.;  Nian, X. M.;  Yi, M. J.;  Zhou, X. Y.;  Zhang, P. Q.;  Jin, Y. S.;  Bar-Yosef, O.;  Olsen, J. W.;  Gao, X.
收藏  |  浏览/下载:20/0  |  提交时间:2019/11/27
Microphysical characteristics of frozen droplet aggregates from deep convective clouds 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2018, 18 (23) : 16915-16930
作者:  Um, Junshik;  McFarquhar, Greg M.;  Stith, Jeffrey L.;  Jung, Chang Hoon;  Lee, Seoung Soo;  Lee, Ji Yi;  Shin, Younghwan;  Lee, Yun Gon;  Yang, Yiseok Isaac;  Yum, Seong Soo;  Kim, Byung-Gon;  Cha, JooWan;  Ko, A-Reum
收藏  |  浏览/下载:9/0  |  提交时间:2019/04/09
The vertical variability of ammonia in urban Beijing, China 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2018, 18 (22) : 16385-16398
作者:  Zhang, Yangyang;  Tang, Aohan;  Wang, Dandan;  Wang, Qingqing;  Benedict, Katie;  Zhang, Lin;  Liu, Duanyang;  Li, Yi;  Collett, Jeffrey L., Jr.;  Sun, Yele;  Liu, Xuejun
收藏  |  浏览/下载:10/0  |  提交时间:2019/04/09