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COS-derived GPP relationships with temperature and light help explain high-latitude atmospheric CO2 seasonal cycle amplification 期刊论文
Proceedings of the National Academy of Science, 2021
作者:  Lei Hu;  Stephen A. Montzka;  Aleya Kaushik;  Arlyn E. Andrews;  Colm Sweeney;  John Miller;  Ian T. Baker;  Scott Denning;  Elliott Campbell;  Yoichi P. Shiga;  Pieter Tans;  M. Carolina Siso;  Molly Crotwell;  Kathryn McKain;  Kirk Thoning;  Bradley Hall;  Isaac Vimont;  James W. Elkins;  Mary E. Whelan;  Parvadha Suntharalingam
收藏  |  浏览/下载:12/0  |  提交时间:2021/08/17
The age distribution of global soil carbon inferred from radiocarbon measurements 期刊论文
NATURE GEOSCIENCE, 2020
作者:  Shi, Zheng;  Allison, Steven D.;  He, Yujie;  Levine, Paul A.;  Hoyt, Alison M.;  Beem-Miller, Jeffrey;  Zhu, Qing;  Wieder, William R.;  Trumbore, Susan;  Randerson, James T.
收藏  |  浏览/下载:18/0  |  提交时间:2020/07/06
Coastal sedimentation across North America doubled in the 20(th) century despite river dams 期刊论文
NATURE COMMUNICATIONS, 2020, 11 (1)
作者:  Rodriguez, A. B.;  McKee, B. A.;  Miller, C. B.;  Bost, M. C.;  Atencio, A. N.
收藏  |  浏览/下载:8/0  |  提交时间:2020/06/29
Summertime Post-Cold-Frontal Marine Stratocumulus Transition Processes over the Eastern North Atlantic 期刊论文
Journal of the Atmospheric Sciences, 2020
作者:  Melissa kazemirad;  Mark A. Miller
收藏  |  浏览/下载:0/0  |  提交时间:2020/05/25
Missing OH reactivity in the global marine boundary layer 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (6) : 4013-4029
作者:  Thames, Alexander B.;  Brune, William H.;  Miller, David O.;  Allen, Hannah M.;  Apel, Eric C.;  Blake, Donald R.;  Bui, T. Paul;  Commane, Roisin;  Crounse, John D.;  Daube, Bruce C.;  Diskin, Glenn S.;  DiGangi, Joshua P.;  Elkins, JamesW.;  Hall, Samuel R.;  Hanisco, Thomas F.;  Hannun, Reem A.;  Hintsa, Eric;  Hornbrook, Rebecca S.;  Kim, Michelle J.;  McKain, Kathryn;  Moore, Fred L.;  Nicely, Julie M.;  Peischl, Jeffrey;  Ryerson, Thomas B.;  St Clair, Jason M.;  Sweeney, Colm;  Teng, Alex;  Thompson, Chelsea R.;  Ullmann, Kirk;  Wennberg, Paul O.;  Wolfe, Glenn M.
收藏  |  浏览/下载:14/0  |  提交时间:2020/07/02
Editorial Expression of Concern: Quantized Majorana conductance 期刊论文
NATURE, 2020: 1-1
作者:  Ge, Peng;  Scholl, Dean;  Prokhorov, Nikolai S.;  Avaylon, Jaycob;  Shneider, Mikhail M.;  Browning, Christopher;  Buth, Sergey A.;  Plattner, Michel;  Chakraborty, Urmi;  Ding, Ke;  Leiman, Petr G.;  Miller, Jeff F.;  Zhou, Z. Hong
收藏  |  浏览/下载:8/0  |  提交时间:2020/07/03
Environmental reservoir dynamics predict global infection patterns and population impacts for the fungal disease white-nose syndrome 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (13) : 7255-7262
作者:  Hoyt, Joseph R.;  Langwig, Kate E.;  Sun, Keping;  Parise, Katy L.;  Li, Aoqiang;  Wang, Yujuan;  Huang, Xiaobin;  Worledge, Lisa;  Miller, Helen;  White, J. Paul;  Kaarakka, Heather M.;  Redell, Jennifer A.;  Gorfol, Tamas;  Boldogh, Sandor Andras;  Fukui, Dai;  Sakuyama, Muneki;  Yachimori, Syuuji;  Sato, Akiyoshi;  Dalannast, Munkhnast;  Jargalsaikhan, Ariunbold;  Batbayar, Nyambayar;  Yovel, Yossi;  Amichai, Eran;  Natradze, Ioseb;  Frick, Winifred F.;  Foster, Jeffrey T.;  Feng, Jiang;  Kilpatrick, A. Marm
收藏  |  浏览/下载:14/0  |  提交时间:2020/05/13
environmental pathogen reservoir  global disease dynamics  white-nose syndrome  Pseudogymnoascus destructans  
Global airborne sampling reveals a previously unobserved dimethyl sulfide oxidation mechanism in the marine atmosphere 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (9) : 4505-4510
作者:  Veres, Patrick R.;  Neuman, J. Andrew;  Bertram, Timothy H.;  Assaf, Emmanuel;  Wolfe, Glenn M.;  Williamson, Christina J.;  Weinzierl, Bernadett;  Tilmes, Simone;  Thompson, Chelsea R.;  Thames, Alexander B.;  Schroder, Jason C.;  Saiz-Lopez, Alfonso;  Rollins, Andrew W.;  Roberts, James M.;  Price, Derek;  Peischl, Jeff;  Nault, Benjamin A.;  Moller, Kristian H.;  Miller, David O.;  Meinardi, Simone;  Li, Qinyi;  Lamarque, Jean-Francois;  Kupc, Agnieszka;  Kjaergaard, Henrik G.;  Kinnison, Douglas;  Jimenez, Jose L.;  Jernigan, Christopher M.;  Hornbrook, Rebecca S.;  Hills, Alan;  Dollner, Maximilian;  Day, Douglas A.;  Cuevas, Carlos A.;  Campuzano-Jost, Pedro;  Burkholder, James;  Bui, T. Paul;  Brune, William H.;  Brown, Steven S.;  Brock, Charles A.;  Bourgeois, Ilann;  Blake, Donald R.;  Apel, Eric C.;  Ryerson, Thomas B.
收藏  |  浏览/下载:21/0  |  提交时间:2020/05/13
dimethyl sulfide  marine sulfur  autoxidation  marine aerosols  aerosol sulfate  
The molecular basis for sugar import in malaria parasites 期刊论文
NATURE, 2020, 578 (7794) : 321-+
作者:  Zhao, Peishen;  Liang, Yi-Lynn;  Belousoff, Matthew J.;  Deganutti, Giuseppe;  Fletcher, Madeleine M.;  Willard, Francis S.;  Bell, Michael G.;  Christe, Michael E.;  Sloop, Kyle W.;  Inoue, Asuka;  Truong, Tin T.;  Clydesdale, Lachlan;  Furness, Sebastian G. B.;  Christopoulos, Arthur;  Wang, Ming-Wei;  Miller, Laurence J.;  Reynolds, Christopher A.;  Danev, Radostin;  Sexton, Patrick M.;  Wootten, Denise
收藏  |  浏览/下载:18/0  |  提交时间:2020/07/03

Elucidating the mechanism of sugar import requires a molecular understanding of how transporters couple sugar binding and gating events. Whereas mammalian glucose transporters (GLUTs) are specialists(1), the hexose transporter from the malaria parasite Plasmodium falciparum PfHT1(2,3) has acquired the ability to transport both glucose and fructose sugars as efficiently as the dedicated glucose (GLUT3) and fructose (GLUT5) transporters. Here, to establish the molecular basis of sugar promiscuity in malaria parasites, we determined the crystal structure of PfHT1 in complex with d-glucose at a resolution of 3.6 angstrom. We found that the sugar-binding site in PfHT1 is very similar to those of the distantly related GLUT3 and GLUT5 structures(4,5). Nevertheless, engineered PfHT1 mutations made to match GLUT sugar-binding sites did not shift sugar preferences. The extracellular substrate-gating helix TM7b in PfHT1 was positioned in a fully occluded conformation, providing a unique glimpse into how sugar binding and gating are coupled. We determined that polar contacts between TM7b and TM1 (located about 15 angstrom from d-glucose) are just as critical for transport as the residues that directly coordinate d-glucose, which demonstrates a strong allosteric coupling between sugar binding and gating. We conclude that PfHT1 has achieved substrate promiscuity not by modifying its sugar-binding site, but instead by evolving substrate-gating dynamics.


Crystal structure of the Plasmodium falciparum hexose transporter PfHT1 reveals the molecular basis of its ability to transport multiple types of sugar as efficiently as the dedicated mammalian glucose and fructose transporters.


  
Processive extrusion of polypeptide loops by a Hsp100 disaggregase 期刊论文
NATURE, 2020, 578 (7794) : 317-+
作者:  Zhao, Peishen;  Liang, Yi-Lynn;  Belousoff, Matthew J.;  Deganutti, Giuseppe;  Fletcher, Madeleine M.;  Willard, Francis S.;  Bell, Michael G.;  Christe, Michael E.;  Sloop, Kyle W.;  Inoue, Asuka;  Truong, Tin T.;  Clydesdale, Lachlan;  Furness, Sebastian G. B.;  Christopoulos, Arthur;  Wang, Ming-Wei;  Miller, Laurence J.;  Reynolds, Christopher A.;  Danev, Radostin;  Sexton, Patrick M.;  Wootten, Denise
收藏  |  浏览/下载:17/0  |  提交时间:2020/07/03

The ability to reverse protein aggregation is vital to cells(1,2). Hsp100 disaggregases such as ClpB and Hsp104 are proposed to catalyse this reaction by translocating polypeptide loops through their central pore(3,4). This model of disaggregation is appealing, as it could explain how polypeptides entangled within aggregates can be extracted and subsequently refolded with the assistance of Hsp70(4,5). However, the model is also controversial, as the necessary motor activity has not been identified(6-8) and recent findings indicate non-processive mechanisms such as entropic pulling or Brownian ratcheting(9,10). How loop formation would be accomplished is also obscure. Indeed, cryo-electron microscopy studies consistently show single polypeptide strands in the Hsp100 pore(11,12). Here, by following individual ClpB-substrate complexes in real time, we unambiguously demonstrate processive translocation of looped polypeptides. We integrate optical tweezers with fluorescent-particle tracking to show that ClpB translocates both arms of the loop simultaneously and switches to single-arm translocation when encountering obstacles. ClpB is notably powerful and rapid  it exerts forces of more than 50 pN at speeds of more than 500 residues per second in bursts of up to 28 residues. Remarkably, substrates refold while exiting the pore, analogous to co-translational folding. Our findings have implications for protein-processing phenomena including ubiquitin-mediated remodelling by Cdc48 (or its mammalian orthologue p97)(13) and degradation by the 26S proteasome(14).


A combination of optical tweezers and fluorescent-particle tracking is used to dissect the dynamics of the Hsp100 disaggregase ClpB, and show that the processive extrusion of polypeptide loops is the mechanistic basis of its activity.