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Ligand-induced monoubiquitination of BIK1 regulates plant immunity 期刊论文
NATURE, 2020, 581 (7807) : 199-+
作者:  Shao, Wei;  Yang, Jiajun;  He, Ming;  Yu, Xiang-Yu;  Lee, Choong Heon;  Yang, Zhaohui;  Joyner, Alexandra L.;  Anderson, Kathryn V.;  Zhang, Jiangyang;  Tsou, Meng-Fu Bryan;  Shi, Hang;  Shi, Song-Hai
收藏  |  浏览/下载:8/0  |  提交时间:2020/07/03

Recognition of microbe-associated molecular patterns (MAMPs) by pattern recognition receptors (PRRs) triggers the first line of inducible defence against invading pathogens(1-3). Receptor-like cytoplasmic kinases (RLCKs) are convergent regulators that associate with multiple PRRs in plants(4). The mechanisms that underlie the activation of RLCKs are unclear. Here we show that when MAMPs are detected, the RLCK BOTRYTIS-INDUCED KINASE 1 (BIK1) is monoubiquitinated following phosphorylation, then released from the flagellin receptor FLAGELLIN SENSING 2 (FLS2)-BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED KINASE 1 (BAK1) complex, and internalized dynamically into endocytic compartments. The Arabidopsis E3 ubiquitin ligases RING-H2 FINGER A3A (RHA3A) and RHA3B mediate the monoubiquitination of BIK1, which is essential for the subsequent release of BIK1 from the FLS2-BAK1 complex and activation of immune signalling. Ligand-induced monoubiquitination and endosomal puncta of BIK1 exhibit spatial and temporal dynamics that are distinct from those of the PRR FLS2. Our study reveals the intertwined regulation of PRR-RLCK complex activation by protein phosphorylation and ubiquitination, and shows that ligand-induced monoubiquitination contributes to the release of BIK1 family RLCKs from the PRR complex and activation of PRR signalling.


  
Mott and generalized Wigner crystal states in WSe2/WS2 moire superlattices 期刊论文
NATURE, 2020, 579 (7799) : 359-+
作者:  Yuan, Jie;  Chang, Si-Yuan;  Yin, Shi-Gang;  Liu, Zhi-Yang;  Cheng, Xiu;  Liu, Xi-Juan;  Jiang, Qiang;  Gao, Ge;  Lin, De-Ying;  Kang, Xin-Lei;  Ye, Shi-Wei;  Chen, Zheng;  Yin, Jiang-An;  Hao, Pei;  Jiang, Lubin;  Cai, Shi-Qing
收藏  |  浏览/下载:50/0  |  提交时间:2020/07/03

Strongly correlated insulating Mott and generalized Wigner phases are detected in WSe2/WS2 moire superlattices, and their electrical properties and excited spin states are studied using an optical technique.


Moire superlattices can be used to engineer strongly correlated electronic states in two-dimensional van der Waals heterostructures, as recently demonstrated in the correlated insulating and superconducting states observed in magic-angle twisted-bilayer graphene and ABC trilayer graphene/boron nitride moire superlattices(1-4). Transition metal dichalcogenide moire heterostructures provide another model system for the study of correlated quantum phenomena(5) because of their strong light-matter interactions and large spin-orbit coupling. However, experimental observation of correlated insulating states in this system is challenging with traditional transport techniques. Here we report the optical detection of strongly correlated phases in semiconducting WSe2/WS2 moire superlattices. We use a sensitive optical detection technique and reveal a Mott insulator state at one hole per superlattice site and surprising insulating phases at 1/3 and 2/3 filling of the superlattice, which we assign to generalized Wigner crystallization on the underlying lattice(6-11). Furthermore, the spin-valley optical selection rules(12-14) of transition metal dichalcogenide heterostructures allow us to optically create and investigate low-energy excited spin states in the Mott insulator. We measure a very long spin relaxation lifetime of many microseconds in the Mott insulating state, orders of magnitude longer than that of charge excitations. Our studies highlight the value of using moire superlattices beyond graphene to explore correlated physics.


  
Mass-spectrometry-based draft of the Arabidopsis proteome 期刊论文
NATURE, 2020
作者:  Vasanthakumar, Ajithkumar;  Chisanga, David;  Blume, Jonas;  Gloury, Renee;  Britt, Kara;  Henstridge, Darren C.;  Zhan, Yifan;  Torres, Santiago Valle;  Liene, Sebastian;  Collins, Nicholas;  Cao, Enyuan;  Sidwell, Tom;  Li, Chaoran;  Spallanzani, Raul German;  Liao, Yang;  Beavis, Paul A.;  Gebhardt, Thomas;  Trevaskis, Natalie;  Nutt, Stephen L.;  Zajac, Jeffrey D.;  Davey, Rachel A.;  Febbraio, Mark A.;  Mathis, Diane;  Shi, Wei;  Kallies, Axel
收藏  |  浏览/下载:37/0  |  提交时间:2020/07/03

Plants are essential for life and are extremely diverse organisms with unique molecular capabilities(1). Here we present a quantitative atlas of the transcriptomes, proteomes and phosphoproteomes of 30 tissues of the model plant Arabidopsis thaliana. Our analysis provides initial answers to how many genes exist as proteins (more than 18,000), where they are expressed, in which approximate quantities (a dynamic range of more than six orders of magnitude) and to what extent they are phosphorylated (over 43,000 sites). We present examples of how the data may be used, such as to discover proteins that are translated from short open-reading frames, to uncover sequence motifs that are involved in the regulation of protein production, and to identify tissue-specific protein complexes or phosphorylation-mediated signalling events. Interactive access to this resource for the plant community is provided by the ProteomicsDB and ATHENA databases, which include powerful bioinformatics tools to explore and characterize Arabidopsis proteins, their modifications and interactions.


A quantitative atlas of the transcriptomes, proteomes and phosphoproteomes of 30 tissues of the model plant Arabidopsis thaliana provides a valuable resource for plant research.


  
A simple dynamic model explains the diversity of island birds worldwide 期刊论文
NATURE, 2020
作者:  Li, Junxue;  Wilson, C. Blake;  Cheng, Ran;  Lohmann, Mark;  Kavand, Marzieh;  Yuan, Wei;  Aldosary, Mohammed;  Agladze, Nikolay;  Wei, Peng;  Sherwin, Mark S.;  Shi, Jing
收藏  |  浏览/下载:12/0  |  提交时间:2020/07/03

Colonization, speciation and extinction are dynamic processes that influence global patterns of species richness(1-6). Island biogeography theory predicts that the contribution of these processes to the accumulation of species diversity depends on the area and isolation of the island(7,8). Notably, there has been no robust global test of this prediction for islands where speciation cannot be ignored(9), because neither the appropriate data nor the analytical tools have been available. Here we address both deficiencies to reveal, for island birds, the empirical shape of the general relationships that determine how colonization, extinction and speciation rates co-vary with the area and isolation of islands. We compiled a global molecular phylogenetic dataset of birds on islands, based on the terrestrial avifaunas of 41 oceanic archipelagos worldwide (including 596 avian taxa), and applied a new analysis method to estimate the sensitivity of island-specific rates of colonization, speciation and extinction to island features (area and isolation). Our model predicts-with high explanatory power-several global relationships. We found a decline in colonization with isolation, a decline in extinction with area and an increase in speciation with area and isolation. Combining the theoretical foundations of island biogeography(7,8) with the temporal information contained in molecular phylogenies(10) proves a powerful approach to reveal the fundamental relationships that govern variation in biodiversity across the planet.


Using a global molecular phylogenetic dataset of birds on islands, the sensitivity of island-specific rates of colonization, speciation and extinction to island features (area and isolation) is estimated.


  
Field-experiment constraints on the enhancement of the terrestrial carbon sink by CO(2 )fertilization 期刊论文
NATURE GEOSCIENCE, 2019, 12 (10) : 809-+
作者:  Liu, Yongwen;  Piao, Shilong;  Gasser, Thomas;  Ciais, Philippe;  Yang, Hui;  Wang, Han;  Keenan, Trevor F.;  Huang, Mengtian;  Wan, Shiqiang;  Song, Jian;  Wang, Kai;  Janssens, Ivan A.;  Penuelas, Josep;  Huntingford, Chris;  Wang, Xuhui;  Arain, Muhammad Altaf;  Fang, Yuanyuan;  Fisher, Joshua B.;  Huang, Maoyi;  Huntzinger, Deborah N.;  Ito, Akihiko;  Jain, Atul K.;  Mao, Jiafu;  Michalak, Anna M.;  Peng, Changhui;  Poulter, Benjamin;  Schwalm, Christopher;  Shi, Xiaoying;  Tian, Hanqin;  Wei, Yaxing;  Zeng, Ning;  Zhu, Qiuan;  Wang, Tao
收藏  |  浏览/下载:14/0  |  提交时间:2019/11/27
Generation of multicomponent atomic Schrodinger cat states of up to 20 qubits 期刊论文
SCIENCE, 2019, 365 (6453) : 574-577
作者:  Song, Chao;  Xu, Kai;  Li, Hekang;  Zhang, Yu-Ran;  Zhang, Xu;  Liu, Wuxin;  Guo, Qiujiang;  Wang, Zhen;  Ren, Wenhui;  Hao, Jie;  Feng, Hui;  Fan, Heng;  Zheng, Dongning;  Wang, Da-Wei;  Wang, H.;  Zhu, Shi-Yao
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27
Resetting histone modifications during human parental-to-zygotic transition 期刊论文
SCIENCE, 2019, 365 (6451) : 353-+
作者:  Xia, Weikun;  Xu, Jiawei;  Yu, Guang;  Yao, Guidong;  Xu, Kai;  Ma, Xueshan;  Zhang, Nan;  Liu, Bofeng;  Li, Tong;  Lin, Zili;  Chen, Xia;  Li, Lijia;  Wang, Qiujun;  Shi, Dayuan;  Shi, Senlin;  Zhang, Yile;  Song, Wenyan;  Jin, Haixia;  Hu, Linli;  Bu, Zhiqin;  Wang, Yang;  Na, Jie;  Xie, Wei;  Sun, Ying-Pu
收藏  |  浏览/下载:10/0  |  提交时间:2019/11/27
A molecular perovskite solid solution with piezoelectricity stronger than lead zirconate titanate 期刊论文
SCIENCE, 2019, 363 (6432) : 1206-+
作者:  Liao, Wei-Qiang;  Zhao, Dewei;  Tang, Yuan-Yuan;  Zhang, Yi;  Li, Peng-Fei;  Shi, Ping-Ping;  Chen, Xiao-Gang;  You, Yu-Meng;  Xiong, Ren-Gen
收藏  |  浏览/下载:16/0  |  提交时间:2019/11/27
Triple junction kinematics accounts for the 2016 Mw 7.8 Kaikoura earthquake rupture complexity 期刊论文
Proceedings of the National Academy of Sciences of the United States of America, 2019, 116 (52) : 26367-26375
作者:  Xuhua Shi;  Paul Tapponnier;  Teng Wang;  Shengji Wei;  Yu Wang;  Xin Wang;  and Liqing Jiao
收藏  |  浏览/下载:9/0  |  提交时间:2020/04/16
New Zealand  triple-junction migration  Kaikoura–Kermadec sliver plate  Kaikoura earthquake  rupture complexity  
An autoimmune disease variant of IgG1 modulates B cell activation and differentiation 期刊论文
SCIENCE, 2018, 362 (6415) : 700-+
作者:  Chen, Xiangjun;  Sun, Xiaolin;  Yang, Wei;  Yang, Bing;  Zhao, Xiaozhen;  Chen, Shuting;  He, Lili;  Chen, Hui;  Yang, Changmei;  Xiao, Le;  Chang, Zai;  Guo, Jianping;  He, Jing;  Zhang, Fuping;  Zheng, Fang;  Hu, Zhibin;  Yang, Zhiyong;  Lou, Jizhong;  Zheng, Wenjie;  Qi, Hai;  Xu, Chenqi;  Zhang, Hong;  Shan, Hongying;  Zhou, Xu-jie;  Wang, Qingwen;  Shi, Yi;  Lai, Luhua;  Li, Zhanguo;  Liu, Wanli
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27