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Constraining remote oxidation capacity with ATom observations 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (13) : 7753-7781
作者:  Travis, Katherine R.;  Heald, Colette L.;  Allen, Hannah M.;  Apel, Eric C.;  Arnold, Stephen R.;  Blake, Donald R.;  Brune, William H.;  Chen, Xin;  Commane, Roisin;  Crounse, John D.;  Daube, Bruce C.;  Diskin, Glenn S.;  Elkins, James W.;  Evans, Mathew J.;  Hall, Samuel R.;  Hintsa, Eric J.;  Hornbrook, Rebecca S.;  Kasibhatla, Prasad S.;  Kim, Michelle J.;  Luo, Gan;  McKain, Kathryn;  Millet, Dylan B.;  Moore, Fred L.;  Peischl, Jeffrey;  Ryerson, Thomas B.;  Sherwen, Tomas;  Thames, Alexander B.;  Ullmann, Kirk;  Wang, Xuan;  Wennberg, Paul O.;  Wolfe, Glenn M.;  Yu, Fangqun
收藏  |  浏览/下载:49/0  |  提交时间:2020/08/18
A neurotransmitter produced by gut bacteria modulates host sensory behaviour 期刊论文
NATURE, 2020
作者:  Zhao, Xiaoxu;  Song, Peng;  Wang, Chengcai;  Riis-Jensen, Anders C.;  Fu, Wei;  Deng, Ya;  Wan, Dongyang;  Kang, Lixing;  Ning, Shoucong;  Dan, Jiadong;  Venkatesan, T.;  Liu, Zheng;  Zhou, Wu;  Thygesen, Kristian S.;  Luo, Xin;  Pennycook, Stephen J.;  Loh, Kian Ping
收藏  |  浏览/下载:9/0  |  提交时间:2020/07/03

A neuromodulator produced by commensalProvidenciabacteria that colonize the gut ofCaenorhabditis elegansmimics the functions of the cognate host molecule to manipulate a sensory decision of the host.


Animals coexist in commensal, pathogenic or mutualistic relationships with complex communities of diverse organisms, including microorganisms(1). Some bacteria produce bioactive neurotransmitters that have previously been proposed to modulate nervous system activity and behaviours of their hosts(2,3). However, the mechanistic basis of this microbiota-brain signalling and its physiological relevance are largely unknown. Here we show that inCaenorhabditis elegans, the neuromodulator tyramine produced by commensalProvidenciabacteria, which colonize the gut, bypasses the requirement for host tyramine biosynthesis and manipulates a host sensory decision. Bacterially produced tyramine is probably converted to octopamine by the host tyramine beta-hydroxylase enzyme. Octopamine, in turn, targets the OCTR-1 octopamine receptor on ASH nociceptive neurons to modulate an aversive olfactory response. We identify the genes that are required for tyramine biosynthesis inProvidencia, and show that these genes are necessary for the modulation of host behaviour. We further find thatC. eleganscolonized byProvidenciapreferentially select these bacteria in food choice assays, and that this selection bias requires bacterially produced tyramine and host octopamine signalling. Our results demonstrate that a neurotransmitter produced by gut bacteria mimics the functions of the cognate host molecule to override host control of a sensory decision, and thereby promotes fitness of both the host and the microorganism.


  
Mutational signature in colorectal cancer caused by genotoxic pks(+)E. coli 期刊论文
NATURE, 2020, 580 (7802) : 269-+
作者:  Lin, Xi;  Li, Mingyue;  Wang, Niandong;  Wu, Yiran;  Luo, Zhipu;  Guo, Shimeng;  Han, Gye-Won;  Li, Shaobai;  Yue, Yang;  Wei, Xiaohu;  Xie, Xin;  Chen, Yong;  Zhao, Suwen;  Wu, Jian;  Lei, Ming;  Xu, Fei
收藏  |  浏览/下载:22/0  |  提交时间:2020/07/03

Various species of the intestinal microbiota have been associated with the development of colorectal cancer(1,2), but it has not been demonstrated that bacteria have a direct role in the occurrence of oncogenic mutations. Escherichia coli can carry the pathogenicity island pks, which encodes a set of enzymes that synthesize colibactin(3). This compound is believed to alkylate DNA on adenine residues(4,5) and induces double-strand breaks in cultured cells(3). Here we expose human intestinal organoids to genotoxic pks(+)E. coli by repeated luminal injection over five months. Whole-genome sequencing of clonal organoids before and after this exposure revealed a distinct mutational signature that was absent from organoids injected with isogenic pks-mutant bacteria. The same mutational signature was detected in a subset of 5,876 human cancer genomes from two independent cohorts, predominantly in colorectal cancer. Our study describes a distinct mutational signature in colorectal cancer and implies that the underlying mutational process results directly from past exposure to bacteria carrying the colibactin-producing pks pathogenicity island.


Organoids derived from human intestinal cells that are co-cultured with bacteria carrying the genotoxic pks(+) island develop a distinct mutational signature associated with colorectal cancer.


  
Spatial Characteristics Reveal the Reactive Transport of Radium Isotopes (Ra-224, Ra-223, and Ra-228) in an Intertidal Aquifer 期刊论文
WATER RESOURCES RESEARCH, 2019, 55 (12) : 10282-10302
作者:  Liu, Yi;  Jiao, Jiu Jimmy;  Mao, Rong;  Luo, Xin;  Liang, Wenzhao;  Robinson, Clare E.
收藏  |  浏览/下载:9/0  |  提交时间:2020/02/16
radium isotopes  reactive transport  intertidal aquifer  submarine groundwater discharge (SGD)  subterranean estuary  
Policy distortions, farm size, and the overuse of agricultural chemicals in China 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2018, 115 (27) : 7010-7015
作者:  Wu, Yiyun;  Xi, Xican;  Tang, Xin;  Luo, Deming;  Gu, Baojing;  Lam, Shu Kee;  Vitousek, Peter M.;  Chen, Deli
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27
crop yield  environmental protection  fertilizer use efficiency  socioeconomic barriers  urbanization  
Hydrocarbon generation capability of Sinian-Lower Cambrian shale, mudstone, and carbonate rocks in the Sichuan Basin, southwestern China: Implications for contributions to the giant Sinian Dengying natural gas accumulation 期刊论文
AAPG BULLETIN, 2018, 102 (5) : 817-853
作者:  Shi, Chunhua;  Cao, Jian;  Tan, Xiucheng;  Luo, Bing;  Zeng, Wei;  Hong, Haitao;  Huang, Xin;  Wang, Yong
收藏  |  浏览/下载:6/0  |  提交时间:2019/04/09
Using Tidal Fluctuation-Induced Dynamics of Radium Isotopes (Ra-224, Ra-223, and Ra-228) to Trace the Hydrodynamics and Geochemical Reactions in a Coastal Groundwater Mixing Zone 期刊论文
WATER RESOURCES RESEARCH, 2018, 54 (4) : 2909-2930
作者:  Liu, Yi;  Jiao, Jiu Jimmy;  Liang, Wenzhao;  Luo, Xin
收藏  |  浏览/下载:5/0  |  提交时间:2019/04/09
Recently amplified arctic warming has contributed to a continual global warming trend (vol 7, pg 875, 2017) 期刊论文
NATURE CLIMATE CHANGE, 2018, 8 (4) : 345-345
作者:  Huang, Jianbin;  Zhang, Xiangdong;  Zhang, Qiyi;  Lin, Yanluan;  Hao, Mingju;  Luo, Yong;  Zhao, Zongci;  Yao, Yao;  Chen, Xin;  Wang, Lei;  Nie, Suping;  Yin, Yizhou;  Xu, Ying;  Zhang, Jiansong
收藏  |  浏览/下载:7/0  |  提交时间:2019/04/09
Structure of Schlafen13 reveals a new class of tRNA/rRNA- targeting RNase engaged in translational control 期刊论文
NATURE COMMUNICATIONS, 2018, 9
作者:  Yang, Jin-Yu;  Deng, Xiang-Yu;  Li, Yi-Sheng;  Ma, Xian-Cai;  Feng, Jian-Xiong;  Yu, Bing;  Chen, Yang;  Luo, Yi-Ling;  Wang, Xi;  Chen, Mei-Ling;  Fang, Zhi-Xin;  Zheng, Fu-Xiang;  Li, Yi-Ping;  Zhong, Qian;  Kang, Tie-Bang;  Song, Li-Bing;  Xu, Rui-Hua;  Zeng, Mu-Sheng;  Chen, Wei;  Zhang, Hui;  Xie, Wei;  Gao, Song
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/27
Genome-wide identification of interferon-sensitive mutations enables influenza vaccine design 期刊论文
SCIENCE, 2018, 359 (6373) : 290-+
作者:  Du, Yushen;  Xin, Li;  Shi, Yuan;  Zhang, Tian-Hao;  Wu, Nicholas C.;  Dai, Lei;  Gong, Danyang;  Brar, Gurpreet;  Shu, Sara;  Luo, Jiadi;  Reiley, William;  Tseng, Yen-Wen;  Bai, Hongyan;  Wu, Ting-Ting;  Wang, Jieru;  Shu, Yuelong;  Sun, Ren
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/27