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Darwin's naturalization conundrum can be explained by spatial scale 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (20) : 10904-10910
作者:  Park, Daniel S.;  Feng, Xiao;  Maitner, Brian S.;  Ernst, Kacey C.;  Enquist, Brian J.
收藏  |  浏览/下载:16/0  |  提交时间:2020/05/13
biological invasions  competition  Darwin'  s naturalization hypothesis  environmental filtering  spatial resolution  
Mechanical regulation of glycolysis via cytoskeleton architecture 期刊论文
NATURE, 2020, 578 (7796) : 621-+
作者:  Faivre, Emily J.;  McDaniel, Keith F.;  Albert, Daniel H.;  Mantena, Srinivasa R.;  Plotnik, Joshua P.;  Wilcox, Denise;  Zhang, Lu;  Bui, Mai H.;  Sheppard, George S.;  Wang, Le;  Sehgal, Vasudha;  Lin, Xiaoyu;  Huang, Xiaoli;  Lu, Xin;  Uziel, Tamar;  Hessler, Paul;  Lam, Lloyd T.;  Bellin, Richard J.;  Mehta, Gaurav;  Fidanze, Steve;  Pratt, John K.;  Liu, Dachun;  Hasvold, Lisa A.;  Sun, Chaohong;  Panchal, Sanjay C.;  Nicolette, John J.;  Fossey, Stacey L.;  Park, Chang H.;  Longenecker, Kenton;  Bigelow, Lance;  Torrent, Maricel;  Rosenberg, Saul H.;  Kati, Warren M.;  Shen, Yu
收藏  |  浏览/下载:15/0  |  提交时间:2020/07/03

The mechanics of the cellular microenvironment continuously modulates cell functions such as growth, survival, apoptosis, differentiation and morphogenesis via cytoskeletal remodelling and actomyosin contractility(1-3). Although all of these processes consume energy(4,5), it is unknown whether and how cells adapt their metabolic activity to variable mechanical cues. Here we report that the transfer of human bronchial epithelial cells from stiff to soft substrates causes a downregulation of glycolysis via proteasomal degradation of the rate-limiting metabolic enzyme phosphofructokinase (PFK). PFK degradation is triggered by the disassembly of stress fibres, which releases the PFK-targeting E3 ubiquitin ligase tripartite motif (TRIM)-containing protein 21 (TRIM21). Transformed non-small-cell lung cancer cells, which maintain high glycolytic rates regardless of changing environmental mechanics, retain PFK expression by downregulating TRIM21, and by sequestering residual TRIM21 on a stress-fibre subset that is insensitive to substrate stiffness. Our data reveal a mechanism by which glycolysis responds to architectural features of the actomyosin cytoskeleton, thus coupling cell metabolism to the mechanical properties of the surrounding tissue. These processes enable normal cells to tune energy production in variable microenvironments, whereas the resistance of the cytoskeleton in response to mechanical cues enables the persistence of high glycolytic rates in cancer cells despite constant alterations of the tumour tissue.


Glycolysis in normal epithelial cells responds to microenvironmental mechanics via the modulation of actin bundles that sequester the phosphofructokinase-targeting ubiquitin ligase TRIM21, a process superseded by persistent actin bundles in cancer cells.


  
Electrical control of interlayer exciton dynamics in atomically thin heterostructures 期刊论文
SCIENCE, 2019, 366 (6467) : 870-+
作者:  Jauregui, Luis A.;  Joe, Andrew Y.;  Pistunova, Kateryna;  Wild, Dominik S.;  High, Alexander A.;  Zhou, You;  Scuri, Giovanni;  De Greve, Kristiaan;  Sushko, Andrey;  Yu, Che-Hang;  Taniguchi, Takashi;  Watanabe, Kenji;  Needleman, Daniel J.;  Lukin, Mikhail D.;  Park, Hongkun;  Kim, Philip
收藏  |  浏览/下载:10/0  |  提交时间:2020/02/17
Rapid molecular evolution of pain insensitivity in multiple African rodents 期刊论文
SCIENCE, 2019, 364 (6443) : 852-+
作者:  Eigenbrod, Ole;  Debus, Karlien Y.;  Reznick, Jane;  Bennett, Nigel C.;  Sanchez-Carranza, Oscar;  Omerbasic, Damir;  Hart, Daniel W.;  Barker, Alison J.;  Zhong, Wei;  Lutermann, Heike;  Katandukila, Jestina V.;  Mgode, Georgies;  Park, Thomas J.;  Lewin, Gary R.
收藏  |  浏览/下载:11/0  |  提交时间:2019/11/27
Comprehensive functional genomic resource and integrative model for the human brain 期刊论文
SCIENCE, 2018, 362 (6420) : 1266-+
作者:  Wang, Daifeng;  Liu, Shuang;  Warrell, Jonathan;  Won, Hyejung;  Shi, Xu;  Navarro, Fabio C. P.;  Clarke, Declan;  Gu, Mengting;  Emani, Prashant;  Yang, Yucheng T.;  Xu, Min;  Gandal, Michael J.;  Lou, Shaoke;  Zhang, Jing;  Park, Jonathan J.;  Yan, Chengfei;  Rhie, Suhn Kyong;  Manakongtreecheep, Kasidet;  Zhou, Holly;  Nathan, Aparna;  Peters, Mette;  Mattei, Eugenio;  Fitzgerald, Dominic;  Brunetti, Tonya;  Moore, Jill;  Jiang, Yan;  Girdhar, Kiran;  Hoffman, Gabriel E.;  Kalayci, Selim;  Gumus, Zeynep H.;  Crawford, Gregory E.;  Roussos, Panos;  Akbarian, Schahram;  Jaffe, Andrew E.;  White, Kevin P.;  Weng, Zhiping;  Sestan, Nenad;  Geschwind, Daniel H.;  Knowles, James A.;  Gerstein, Mark B.
收藏  |  浏览/下载:13/0  |  提交时间:2019/11/27
Intersection of diverse neuronal genomes and neuropsychiatric disease: The Brain Somatic Mosaicism Network 期刊论文
SCIENCE, 2017, 356 (6336)
作者:  McConnell, Michael J.;  Moran, John V.;  Abyzov, Alexej;  Akbarian, Schahram;  Bae, Taejeong;  Cortes-Ciriano, Isidro;  Erwin, Jennifer A.;  Fasching, Liana;  Flasch, Diane A.;  Freed, Donald;  Ganz, Javier;  Jaffe, Andrew E.;  Kwan, Kenneth Y.;  Kwon, Minseok;  Lodato, Michael A.;  Mills, Ryan E.;  Paquola, Apua C. M.;  Rodin, Rachel E.;  Rosenbluh, Chaggai;  Sestan, Nenad;  Sherman, Maxwell A.;  Shin, Joo Heon;  Song, Saera;  Straub, Richard E.;  Thorpe, Jeremy;  Weinberger, Daniel R.;  Urban, Alexander E.;  Zhou, Bo;  Gage, Fred H.;  Lehner, Thomas;  Senthil, Geetha;  Walsh, Christopher A.;  Chess, Andrew;  Courchesne, Eric;  Gleeson, Joseph G.;  Kidd, Jeffrey M.;  Park, Peter J.;  Pevsner, Jonathan;  Vaccarino, Flora M.
收藏  |  浏览/下载:12/0  |  提交时间:2019/11/27
Fructose-driven glycolysis supports anoxia resistance in the naked mole-rat 期刊论文
SCIENCE, 2017, 356 (6335) : 305-308
作者:  Park, Thomas J.;  Reznick, Jane;  Peterson, Bethany L.;  Blass, Gregory;  Omerbasic, Damir;  Bennett, Nigel C.;  Kuich, P. Henning J. L.;  Zasada, Christin;  Browe, Brigitte M.;  Hamann, Wiebke;  Applegate, Daniel T.;  Radke, Michael H.;  Kosten, Tetiana;  Lutermann, Heike;  Gavaghan, Victoria;  Eigenbrod, Ole;  Begay, Valerie;  Amoroso, Vince G.;  Govind, Vidya;  Minshall, Richard D.;  Smith, Ewan St. J.;  Larson, John;  Gotthardt, Michael;  Kempa, Stefan;  Lewin, Gary R.
收藏  |  浏览/下载:5/0  |  提交时间:2019/11/27
Integrated genomic and molecular characterization of cervical cancer 期刊论文
NATURE, 2017, 543 (7645) : 378-+
作者:  Burk, Robert D.;  Chen, Zigui;  Saller, Charles;  Tarvin, Katherine;  Carvalho, Andre L.;  Scapulatempo-Neto, Cristovam;  Silveira, Henrique C.;  Fregnani, Jose H.;  Creighton, Chad J.;  Anderson, Matthew L.;  Castro, Patricia;  Wang, Sophia S.;  Yau, Christina;  Benz, Christopher;  Robertson, A. Gordon;  Mungall, Karen;  Lim, Lynette;  Bowlby, Reanne;  Sadeghi, Sara;  Brooks, Denise;  Sipahimalani, Payal;  Mar, Richard;  Ally, Adrian;  Clarke, Amanda;  Mungall, Andrew J.;  Tam, Angela;  Lee, Darlene;  Chuah, Eric;  Schein, Jacqueline E.;  Tse, Kane;  Kasaian, Katayoon;  Ma, Yussanne;  Marra, Marco A.;  Mayo, Michael;  Balasundaram, Miruna;  Thiessen, Nina;  Dhalla, Noreen;  Carlsen, Rebecca;  Moore, Richard A.;  Holt, Robert A.;  Jones, Steven J. M.;  Wong, Tina;  Pantazi, Angeliki;  Parfenov, Michael;  Kucherlapati, Raju;  Hadjipanayis, Angela;  Seidman, Jonathan;  Kucherlapati, Melanie;  Ren, Xiaojia;  Xu, Andrew W.;  Yang, Lixing;  Park, Peter J.;  Lee, Semin;  Rabeno, Brenda;  Huelsenbeck-Dill, Lori;  Borowsky, Mark;  Cadungog, Mark;  Iacocca, Mary;  Petrelli, Nicholas;  Swanson, Patricia;  Ojesina, Akinyemi I.;  Le, Xuan;  Sandusky, George;  Adebamowo, Sally N.;  Akeredolu, Teniola;  Adebamowo, Clement;  Reynolds, Sheila M.;  Shmulevich, Ilya;  Shelton, Candace;  Crain, Daniel;  Mallery, David;  Curley, Erin;  Gardner, Johanna;  Penny, Robert;  Morris, Scott;  Shelton, Troy;  Liu, Jia;  Lolla, Laxmi;  Chudamani, Sudha;  Wu, Ye;  Birrer, Michael;  McLellan, Michael D.;  Bailey, Matthew H.;  Miller, Christopher A.;  Wyczalkowski, Matthew A.;  Fulton, Robert S.;  Fronick, Catrina C.;  Lu, Charles;  Mardis, Elaine R.;  Appelbaum, Elizabeth L.;  Schmidt, Heather K.;  Fulton, Lucinda A.;  Cordes, Matthew G.;  Li, Tiandao;  Ding, Li;  Wilson, Richard K.;  Rader, Janet S.;  Behmaram, Behnaz;  Uyar, Denise;  Bradley, William;  Wrangle, John;  Pastore, Alessandro;  Levine, Douglas A.;  Dao, Fanny;  Gao, Jianjiong;  Schultz, Nikolaus;  Sander, Chris;  Ladanyi, Marc;  Einstein, Mark;  Teeter, Randall;  Benz, Stephen;  Wentzensen, Nicolas;  Felau, Ina;  Zenklusen, Jean C.;  Bodelon, Clara;  Demchok, John A.;  Yang, Liming;  Sheth, Margi;  Ferguson, Martin L.;  Tarnuzzer, Roy;  Yang, Hannah;  Schiffman, Mark;  Zhang, Jiashan;  Wang, Zhining;  Davidsen, Tanja;  Olaniyan, Olayinka;  Hutter, Carolyn M.;  Sofia, Heidi J.;  Gordenin, Dmitry A.;  Chan, Kin;  Roberts, Steven A.;  Klimczak, Leszek J.;  Van Waes, Carter;  Chen, Zhong;  Saleh, Anthony D.;  Cheng, Hui;  Parfitt, Jeremy;  Bartlett, John;  Albert, Monique;  Arnaout, Angel;  Sekhon, Harman;  Gilbert, Sebastien;  Peto, Myron;  Myers, Jerome;  Harr, Jodi;  Eckman, John;  Bergsten, Julie;  Tucker, Kelinda;  Zach, Leigh Anne;  Karlan, Beth Y.;  Lester, Jenny;  Orsulic, Sandra;  Sun, Qiang;  Naresh, Rashi;  Pihl, Todd;  Wan, Yunhu;  Zaren, Howard;  Sapp, Jennifer;  Miller, Judy;  Drwiega, Paul;  Ojesina, Akinyemi I.;  Murray, Bradley A.;  Zhang, Hailei;  Cherniack, Andrew D.;  Sougnez, Carrie;  Pedamallu, Chandra Sekhar;  Lichtenstein, Lee;  Meyerson, Matthew;  Noble, Michael S.;  Heiman, David I.;  Voet, Doug;  Getz, Gad;  Saksena, Gordon;  Kim, Jaegil;  Shih, Juliann;  Cho, Juok;  Lawrence, Michael S.;  Gehlenborg, Nils;  Lin, Pei;  Beroukhim, Rameen;  Frazer, Scott;  Gabriel, Stacey B.;  Schumacher, Steven E.;  Leraas, Kristen M.;  Lichtenberg, Tara M.;  Zmuda, Erik;  Bowen, Jay;  Frick, Jessica;  Gastier-Foster, Julie M.;  Wise, Lisa;  Gerken, Mark;  Ramirez, Nilsa C.;  Danilova, Ludmila;  Cope, Leslie;  Baylin, Stephen B.;  Salvesen, Helga B.;  Vellano, Christopher P.;  Ju, Zhenlin;  Diao, Lixia;  Zhao, Hao;  Chong, Zechen;  Ryan, Michael C.;  Martinez-Ledesma, Emmanuel;  Verhaak, Roeland G.;  Byers, Lauren Averett;  Yuan, Yuan;  Chen, Ken;  Ling, Shiyun;  Mills, Gordon B.;  Lu, Yiling;  Akbani, Rehan;  Seth, Sahil;  Liang, Han;  Wang, Jing;  Han, Leng;  Weinstein, John N.;  Bristow, Christopher A.;  Zhang, Wei;  Mahadeshwar, Harshad S.;  Sun, Huandong;  Tang, Jiabin;  Zhang, Jianhua;  Song, Xingzhi;  Protopopov, Alexei;  Shaw, Kenna R. Mills;  Chin, Lynda;  Olabode, Oluwole;  Ojesina, Akinyemi I.;  DiSaia, Philip;  Radenbaugh, Amie;  Haussler, David;  Zhu, Jingchun;  Stuart, Josh;  Chalise, Prabhakar;  Koestler, Devin;  Fridley, Brooke L.;  Godwin, Andrew K.;  Madan, Rashna;  Ciriello, Giovanni;  Martinez, Cathleen;  Higgins, Kelly;  Bocklage, Therese;  Auman, J. Todd;  Perou, Charles M.;  Tan, Donghui;  Parker, Joel S.;  Hoadley, Katherine A.;  Wilkerson, Matthew D.;  Mieczkowski, Piotr A.;  Skelly, Tara;  Veluvolu, Umadevi;  Hayes, D. Neil;  Rathmell, W. Kimryn;  Hoyle, Alan P.;  Simons, Janae V.;  Wu, Junyuan;  Mose, Lisle E.;  Soloway, Matthew G.;  Balu, Saianand;  Meng, Shaowu;  Jefferys, Stuart R.;  Bodenheimer, Tom;  Shi, Yan;  Roach, Jeffrey;  Thorne, Leigh B.;  Boice, Lori;  Huang, Mei;  Jones, Corbin D.;  Zuna, Rosemary;  Walker, Joan;  Gunderson, Camille;  Snowbarger, Carie;  Brown, David;  Moxley, Katherine;  Moore, Kathleen;  Andrade, Kelsi;  Landrum, Lisa;  Mannel, Robert;  McMeekin, Scott;  Johnson, Starla;  Nelson, Tina;  Elishaev, Esther;  Dhir, Rajiv;  Edwards, Robert;  Bhargava, Rohit;  Tiezzi, Daniel G.;  Andrade, Jurandyr M.;  Noushmehr, Houtan;  Carlotti, Carlos Gilberto, Jr.;  Tirapelli, Daniela Pretti da Cunha;  Weisenberger, Daniel J.;  Van Den Berg, David J.;  Maglinte, Dennis T.;  Bootwalla, Moiz S.;  Lai, Phillip H.;  Triche, Timothy, Jr.;  Swisher, Elizabeth M.;  Agnew, Kathy J.;  Shelley, Carl Simon;  Laird, Peter W.;  Schwarz, Julie;  Grigsby, Perry;  Mutch, David
收藏  |  浏览/下载:14/0  |  提交时间:2019/04/09