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Estimating US fossil fuel CO2 emissions from measurements of C-14 in atmospheric CO2 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (24) : 13300-13307
作者:  Basu, Sourish;  Lehman, Scott J.;  Miller, John B.;  Andrews, Arlyn E.;  Sweeney, Colm;  Gurney, Kevin R.;  Xu, Xiaomei;  Southon, John;  Tans, Pieter P.
收藏  |  浏览/下载:14/0  |  提交时间:2020/06/09
fossil fuel CO2  radiocarbon  atmospheric inverse modeling  
Missing OH reactivity in the global marine boundary layer 期刊论文
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2020, 20 (6) : 4013-4029
作者:  Thames, Alexander B.;  Brune, William H.;  Miller, David O.;  Allen, Hannah M.;  Apel, Eric C.;  Blake, Donald R.;  Bui, T. Paul;  Commane, Roisin;  Crounse, John D.;  Daube, Bruce C.;  Diskin, Glenn S.;  DiGangi, Joshua P.;  Elkins, JamesW.;  Hall, Samuel R.;  Hanisco, Thomas F.;  Hannun, Reem A.;  Hintsa, Eric;  Hornbrook, Rebecca S.;  Kim, Michelle J.;  McKain, Kathryn;  Moore, Fred L.;  Nicely, Julie M.;  Peischl, Jeffrey;  Ryerson, Thomas B.;  St Clair, Jason M.;  Sweeney, Colm;  Teng, Alex;  Thompson, Chelsea R.;  Ullmann, Kirk;  Wennberg, Paul O.;  Wolfe, Glenn M.
收藏  |  浏览/下载:14/0  |  提交时间:2020/07/02
Fire Seasonality Effect on Post-Fire Wind Dispersal: Response to Keith, Dunker, and Driscoll 期刊论文
TRENDS IN ECOLOGY & EVOLUTION, 2020, 35 (4) : 307-307
作者:  Miller, Russell G.;  Tangney, Ryan;  Enright, Neal J.;  Fontaine, Joseph B.;  Merritt, David J.;  Ooi, Mark K. J.;  Ruthrof, Katinka X.;  Miller, Ben P.
收藏  |  浏览/下载:7/0  |  提交时间:2020/07/02
Seasonal Evolution of Canopy Stomatal Conductance for a Prairie and Maize Field in the Midwestern United States from Continuous Carbonyl Sulfide Fluxes 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2020, 47 (6)
作者:  Berkelhammer, M.;  Alsip, B.;  Matamala, R.;  Cook, D.;  Whelan, M. E.;  Joo, E.;  Bernacchi, C.;  Miller, J.;  Meyers, T.
收藏  |  浏览/下载:3/0  |  提交时间:2020/07/02
Global airborne sampling reveals a previously unobserved dimethyl sulfide oxidation mechanism in the marine atmosphere 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (9) : 4505-4510
作者:  Veres, Patrick R.;  Neuman, J. Andrew;  Bertram, Timothy H.;  Assaf, Emmanuel;  Wolfe, Glenn M.;  Williamson, Christina J.;  Weinzierl, Bernadett;  Tilmes, Simone;  Thompson, Chelsea R.;  Thames, Alexander B.;  Schroder, Jason C.;  Saiz-Lopez, Alfonso;  Rollins, Andrew W.;  Roberts, James M.;  Price, Derek;  Peischl, Jeff;  Nault, Benjamin A.;  Moller, Kristian H.;  Miller, David O.;  Meinardi, Simone;  Li, Qinyi;  Lamarque, Jean-Francois;  Kupc, Agnieszka;  Kjaergaard, Henrik G.;  Kinnison, Douglas;  Jimenez, Jose L.;  Jernigan, Christopher M.;  Hornbrook, Rebecca S.;  Hills, Alan;  Dollner, Maximilian;  Day, Douglas A.;  Cuevas, Carlos A.;  Campuzano-Jost, Pedro;  Burkholder, James;  Bui, T. Paul;  Brune, William H.;  Brown, Steven S.;  Brock, Charles A.;  Bourgeois, Ilann;  Blake, Donald R.;  Apel, Eric C.;  Ryerson, Thomas B.
收藏  |  浏览/下载:21/0  |  提交时间:2020/05/13
dimethyl sulfide  marine sulfur  autoxidation  marine aerosols  aerosol sulfate  
Multispecies Assessment of Factors Influencing Regional CO2 and CH4 Enhancements During the Winter 2017 ACT-America Campaign 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2020, 125 (2)
作者:  Baier, Bianca C.;  Sweeney, Colm;  Choi, Yonghoon;  Davis, Kenneth J.;  DiGangi, Joshua P.;  Feng, Sha;  Fried, Alan;  Halliday, Hannah;  Higgs, Jack;  Lauvaux, Thomas;  Miller, Benjamin R.;  Montzka, Stephen A.;  Newberger, Timothy;  Nowak, John B.;  Patra, Prabir;  Richter, Dirk;  Walega, James;  Weibring, Petter
收藏  |  浏览/下载:10/0  |  提交时间:2020/07/02
Barriers and enablers for prescribed burns for wildfire management in California 期刊论文
NATURE SUSTAINABILITY, 2020, 3 (2) : 101-109
作者:  Miller, Rebecca K.;  Field, Christopher B.;  Mach, Katharine J.
收藏  |  浏览/下载:6/0  |  提交时间:2020/05/13
Exploring Oxidation in the Remote Free Troposphere: Insights From Atmospheric Tomography (ATom) 期刊论文
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2020, 125 (1)
作者:  Brune, W. H.;  Miller, D. O.;  Thames, A. B.;  Allen, H. M.;  Apel, E. C.;  Blake, D. R.;  Bui, T. P.;  Commane, R.;  Crounse, J. D.;  Daube, B. C.;  Diskin, G. S.;  DiGangi, J. P.;  Elkins, J. W.;  Hall, S. R.;  Hanisco, T. F.;  Hannun, R. A.;  Hintsa, E. J.;  Hornbrook, R. S.;  Kim, M. J.;  McKain, K.;  Moore, F. L.;  Neuman, J. A.;  Nicely, J. M.;  Peischl, J.;  Ryerson, T. B.;  St Clair, J. M.;  Sweeney, C.;  Teng, A. P.;  Thompson, C.;  Ullmann, K.;  Veres, P. R.;  Wennberg, P. O.;  Wolfe, G. M.
收藏  |  浏览/下载:10/0  |  提交时间:2020/07/02
The molecular basis for sugar import in malaria parasites 期刊论文
NATURE, 2020, 578 (7794) : 321-+
作者:  Zhao, Peishen;  Liang, Yi-Lynn;  Belousoff, Matthew J.;  Deganutti, Giuseppe;  Fletcher, Madeleine M.;  Willard, Francis S.;  Bell, Michael G.;  Christe, Michael E.;  Sloop, Kyle W.;  Inoue, Asuka;  Truong, Tin T.;  Clydesdale, Lachlan;  Furness, Sebastian G. B.;  Christopoulos, Arthur;  Wang, Ming-Wei;  Miller, Laurence J.;  Reynolds, Christopher A.;  Danev, Radostin;  Sexton, Patrick M.;  Wootten, Denise
收藏  |  浏览/下载:18/0  |  提交时间:2020/07/03

Elucidating the mechanism of sugar import requires a molecular understanding of how transporters couple sugar binding and gating events. Whereas mammalian glucose transporters (GLUTs) are specialists(1), the hexose transporter from the malaria parasite Plasmodium falciparum PfHT1(2,3) has acquired the ability to transport both glucose and fructose sugars as efficiently as the dedicated glucose (GLUT3) and fructose (GLUT5) transporters. Here, to establish the molecular basis of sugar promiscuity in malaria parasites, we determined the crystal structure of PfHT1 in complex with d-glucose at a resolution of 3.6 angstrom. We found that the sugar-binding site in PfHT1 is very similar to those of the distantly related GLUT3 and GLUT5 structures(4,5). Nevertheless, engineered PfHT1 mutations made to match GLUT sugar-binding sites did not shift sugar preferences. The extracellular substrate-gating helix TM7b in PfHT1 was positioned in a fully occluded conformation, providing a unique glimpse into how sugar binding and gating are coupled. We determined that polar contacts between TM7b and TM1 (located about 15 angstrom from d-glucose) are just as critical for transport as the residues that directly coordinate d-glucose, which demonstrates a strong allosteric coupling between sugar binding and gating. We conclude that PfHT1 has achieved substrate promiscuity not by modifying its sugar-binding site, but instead by evolving substrate-gating dynamics.


Crystal structure of the Plasmodium falciparum hexose transporter PfHT1 reveals the molecular basis of its ability to transport multiple types of sugar as efficiently as the dedicated mammalian glucose and fructose transporters.


  
Processive extrusion of polypeptide loops by a Hsp100 disaggregase 期刊论文
NATURE, 2020, 578 (7794) : 317-+
作者:  Zhao, Peishen;  Liang, Yi-Lynn;  Belousoff, Matthew J.;  Deganutti, Giuseppe;  Fletcher, Madeleine M.;  Willard, Francis S.;  Bell, Michael G.;  Christe, Michael E.;  Sloop, Kyle W.;  Inoue, Asuka;  Truong, Tin T.;  Clydesdale, Lachlan;  Furness, Sebastian G. B.;  Christopoulos, Arthur;  Wang, Ming-Wei;  Miller, Laurence J.;  Reynolds, Christopher A.;  Danev, Radostin;  Sexton, Patrick M.;  Wootten, Denise
收藏  |  浏览/下载:17/0  |  提交时间:2020/07/03

The ability to reverse protein aggregation is vital to cells(1,2). Hsp100 disaggregases such as ClpB and Hsp104 are proposed to catalyse this reaction by translocating polypeptide loops through their central pore(3,4). This model of disaggregation is appealing, as it could explain how polypeptides entangled within aggregates can be extracted and subsequently refolded with the assistance of Hsp70(4,5). However, the model is also controversial, as the necessary motor activity has not been identified(6-8) and recent findings indicate non-processive mechanisms such as entropic pulling or Brownian ratcheting(9,10). How loop formation would be accomplished is also obscure. Indeed, cryo-electron microscopy studies consistently show single polypeptide strands in the Hsp100 pore(11,12). Here, by following individual ClpB-substrate complexes in real time, we unambiguously demonstrate processive translocation of looped polypeptides. We integrate optical tweezers with fluorescent-particle tracking to show that ClpB translocates both arms of the loop simultaneously and switches to single-arm translocation when encountering obstacles. ClpB is notably powerful and rapid  it exerts forces of more than 50 pN at speeds of more than 500 residues per second in bursts of up to 28 residues. Remarkably, substrates refold while exiting the pore, analogous to co-translational folding. Our findings have implications for protein-processing phenomena including ubiquitin-mediated remodelling by Cdc48 (or its mammalian orthologue p97)(13) and degradation by the 26S proteasome(14).


A combination of optical tweezers and fluorescent-particle tracking is used to dissect the dynamics of the Hsp100 disaggregase ClpB, and show that the processive extrusion of polypeptide loops is the mechanistic basis of its activity.