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A map of object space in primate inferotemporal cortex 期刊论文
NATURE, 2020, 583 (7814) : 103-+
作者:  Wu, Huihui;  Li, Bosheng;  Iwakawa, Hiro-oki;  Pan, Yajie;  Tang, Xianli;  Ling-hu, Qianyan;  Liu, Yuelin;  Sheng, Shixin;  Feng, Li;  Zhang, Hong;  Zhang, Xinyan;  Tang, Zhonghua;  Xia, Xinli;  Zhai, Jixian;  Guo, Hongwei
收藏  |  浏览/下载:47/0  |  提交时间:2020/07/03

Primate inferotemporal cortex contains a coarse map of object space consisting of four networks, identified using functional imaging, electrophysiology and deep networks.


The inferotemporal (IT) cortex is responsible for object recognition, but it is unclear how the representation of visual objects is organized in this part of the brain. Areas that are selective for categories such as faces, bodies, and scenes have been found(1-5), but large parts of IT cortex lack any known specialization, raising the question of what general principle governs IT organization. Here we used functional MRI, microstimulation, electrophysiology, and deep networks to investigate the organization of macaque IT cortex. We built a low-dimensional object space to describe general objects using a feedforward deep neural network trained on object classification(6). Responses of IT cells to a large set of objects revealed that single IT cells project incoming objects onto specific axes of this space. Anatomically, cells were clustered into four networks according to the first two components of their preferred axes, forming a map of object space. This map was repeated across three hierarchical stages of increasing view invariance, and cells that comprised these maps collectively harboured sufficient coding capacity to approximately reconstruct objects. These results provide a unified picture of IT organization in which category-selective regions are part of a coarse map of object space whose dimensions can be extracted from a deep network.


  
Turbulence and Bed Load Transport in Channels With Randomly Distributed Emergent Patches of Model Vegetation 期刊论文
GEOPHYSICAL RESEARCH LETTERS, 2020, 47 (12)
作者:  Shan, Yuqi;  Zhao, Tian;  Liu, Chao;  Nepf, Heidi
收藏  |  浏览/下载:6/0  |  提交时间:2020/05/13
Bacterial coexistence driven by motility and spatial competition 期刊论文
NATURE, 2020, 578 (7796) : 588-+
作者:  Micke, P.;  Leopold, T.;  King, S. A.;  Benkler, E.;  Spiess, L. J.;  Schmoeger, L.;  Schwarz, M.;  Crespo Lopez-Urrutia, J. R.;  Schmidt, P. O.
收藏  |  浏览/下载:8/0  |  提交时间:2020/07/03

Elucidating elementary mechanisms that underlie bacterial diversity is central to ecology(1,2) and microbiome research(3). Bacteria are known to coexist by metabolic specialization(4), cooperation(5) and cyclic warfare(6-8). Many species are also motile(9), which is studied in terms of mechanism(10,11), benefit(12,13), strategy(14,15), evolution(16,17) and ecology(18,19). Indeed, bacteria often compete for nutrient patches that become available periodically or by random disturbances(2,20,21). However, the role of bacterial motility in coexistence remains unexplored experimentally. Here we show that-for mixed bacterial populations that colonize nutrient patches-either population outcompetes the other when low in relative abundance. This inversion of the competitive hierarchy is caused by active segregation and spatial exclusion within the patch: a small fast-moving population can outcompete a large fast-growing population by impeding its migration into the patch, while a small fast-growing population can outcompete a large fast-moving population by expelling it from the initial contact area. The resulting spatial segregation is lost for weak growth-migration trade-offs and a lack of virgin space, but is robust to population ratio, density and chemotactic ability, and is observed in both laboratory and wild strains. These findings show that motility differences and their trade-offs with growth are sufficient to promote diversity, and suggest previously undescribed roles for motility in niche formation and collective expulsion-containment strategies beyond individual search and survival.


In mixed bacterial populations that colonize nutrient patches, a growth-migration trade-off can lead to spatial exclusion that provides an advantage to populations that become rare, thereby stabilizing the community.


  
Forest structure predictive of fisher (Pekania pennanti) dens exists in recently burned forest in Yosemite, California, USA 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 444: 174-186
作者:  Blomdahl, Erika M.;  Thompson, Craig M.;  Kane, Jonathan R.;  Kane, Van R.;  Churchill, Derek;  Moskal, L. Monika;  Lutz, James A.
收藏  |  浏览/下载:9/0  |  提交时间:2019/11/27
Fisher  Pekania pennanti  Forest structure  Fire severity  Lidar  
The structures underpinning vulnerability: examining landscape-society interactions in a smallholder coffee agroforestry system 期刊论文
ENVIRONMENTAL RESEARCH LETTERS, 2019, 14 (7)
作者:  Morel, Alexandra C.;  Hirons, Mark;  Demissie, Sheleme;  Gonfa, Techane;  Mehrabi, Zia;  Long, Peter R.;  Rifai, Sami;  Gole, Tadesse Woldemariam;  Mason, John;  McDermott, Constance L.;  Boyd, Emily;  Robinson, Elizabeth J. Z.;  Malhi, Yadvinder;  Norris, Ken
收藏  |  浏览/下载:12/0  |  提交时间:2019/11/27
smallholder  coffee forest  vulnerability  El Nino  Ethiopia  
Status and trends of fire activity in southern California yellow pine and mixed conifer forests 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 441: 20-31
作者:  Nigro, Katherine;  Molinari, Nicole
收藏  |  浏览/下载:8/0  |  提交时间:2019/11/26
Southern California  Fire return interval  Burn severity  Fire size  Natural range of variation  Yellow pine  Mixed conifer  
Management of forests and forest carnivores: Relating landscape mosaics to habitat quality of Canada lynx at their range periphery 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 437: 411-425
作者:  Holbrook, Joseph D.;  Squires, John R.;  Bollenbacher, Barry;  Graham, Russ;  Olson, Lucretia E.;  Hanvey, Gary;  Jackson, Scott;  Lawrence, Rick L.;  Savage, Shannon L.
收藏  |  浏览/下载:7/0  |  提交时间:2019/04/09
Endangered species  Habitat-fitness relationship  Lepus americanus  Lynx canadensis  Reproductive success  Silviculture  
Green-tree retention and relative habitat use by mule deer (Odocoileus hemionus) 20 years after harvest of Douglas-fir (Pseudotsuga menziesii) - Lodgepole pine (Pinus contorta) forest 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 437: 426-434
作者:  Sullivan, Thomas P.;  Sullivan, Druscilla S.
收藏  |  浏览/下载:4/0  |  提交时间:2019/04/09
Conifers  Douglas-fir  Habitat use  Herbs and shrubs  Mule deer  Pellet-groups  Winter range  
Population dynamics and geographical distribution of the gypsy moth, Lymantria dispar, in Japan 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 434: 154-164
作者:  Inoue, Maki N.;  Suzuki-Ohno, Yukari;  Haga, Yuri;  Aarai, Hiroshi;  Sano, Tomoya;  Martemyanov, Vyacheslav V.;  Kunimi, Yasuhisa
收藏  |  浏览/下载:4/0  |  提交时间:2019/04/09
Genetic diversity  Gypsy moth  Mitochondria DNA  Maxent  Outbreak  Population dynamics  
The importance of small fire refugia in the central Sierra Nevada, California, USA 期刊论文
FOREST ECOLOGY AND MANAGEMENT, 2019, 432: 1041-1052
作者:  Blomdahl, Erika M.;  Kolden, Crystal A.;  Meddens, Arjan J. H.;  Lutz, James A.
收藏  |  浏览/下载:5/0  |  提交时间:2019/04/09
Fire heterogeneity  Fire mortality  Fire severity  Smithsonian ForestGEO  Yosemite National Park  Yosemite Forest Dynamics Plot