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DOI10.1111/ele.12858
Ecological plant epigenetics: Evidence from model and non-model species, and the way forward
Richards, Christina L.1; Alonso, Conchita2; Becker, Claude3; Bossdorf, Oliver4; Bucher, Etienne5; Colome-Tatche, Maria6,7,8; Durka, Walter9,10; Engelhardt, Jan11; Gaspar, Bence4; Gogol-Doering, Andreas10,12; Grosse, Ivo10,12; van Gurp, Thomas P.13; Heer, Katrin14; Kronholm, Ilkka15; Lampei, Christian16; Latzel, Vit17; Mirouze, Marie18; Opgenoorth, Lars19; Paun, Ovidiu20; Prohaska, Sonja J.11,23; Rensing, Stefan A.21,22; Stadler, Peter F.10,11,23,24; Trucchi, Emiliano20; Ullrich, Kristian21; Verhoeven, Koen J. F.13
2017-12-01
发表期刊ECOLOGY LETTERS
ISSN1461-023X
EISSN1461-0248
出版年2017
卷号20期号:12
文章类型Review
语种英语
国家USA; Spain; Austria; Germany; France; Netherlands; Finland; Czech Republic
英文摘要

Growing evidence shows that epigenetic mechanisms contribute to complex traits, with implications across many fields of biology. In plant ecology, recent studies have attempted to merge ecological experiments with epigenetic analyses to elucidate the contribution of epigenetics to plant phenotypes, stress responses, adaptation to habitat, and range distributions. While there has been some progress in revealing the role of epigenetics in ecological processes, studies with non-model species have so far been limited to describing broad patterns based on anonymous markers of DNA methylation. In contrast, studies with model species have benefited from powerful genomic resources, which contribute to a more mechanistic understanding but have limited ecological realism. Understanding the significance of epigenetics for plant ecology requires increased transfer of knowledge and methods from model species research to genomes of evolutionarily divergent species, and examination of responses to complex natural environments at a more mechanistic level. This requires transforming genomics tools specifically for studying non-model species, which is challenging given the large and often polyploid genomes of plants. Collaboration among molecular geneticists, ecologists and bioinformaticians promises to enhance our understanding of the mutual links between genome function and ecological processes.


英文关键词Bioinformatics ecological epigenetics genomics phenotypic plasticity response to environment
领域资源环境
收录类别SCI-E
WOS记录号WOS:000414938000009
WOS关键词DNA METHYLATION VARIATION ; NATURAL-POPULATIONS ; INDIVIDUAL VARIATION ; CHROMATIN CHANGES ; GENE-EXPRESSION ; SMALL RNAS ; PATTERNS ; INHERITANCE ; RETROTRANSPOSITION ; MUTATIONS
WOS类目Ecology
WOS研究方向Environmental Sciences & Ecology
引用统计
文献类型期刊论文
条目标识符http://119.78.100.173/C666/handle/2XK7JSWQ/31487
专题资源环境科学
作者单位1.Univ S Florida, Dept Integrat Biol, Tampa, FL 33620 USA;
2.CSIC, Estn Biol Donana, Seville 41092, Spain;
3.Austrian Acad Sci, Vienna Bioctr VBC, Gregor Mendel Inst Mol Plant Biol, A-1030 Vienna, Austria;
4.Univ Tubingen, Plant Evolutionary Ecol, D-72076 Tubingen, Germany;
5.Inst Rech Hort & Semences, F-49071 Beaucouze, France;
6.Univ Groningen, Univ Med Ctr Groningen, European Res Inst Biol Ageing, NL-9713 Groningen, Netherlands;
7.Helmholtz Zentrum Munchen, Inst Computat Biol, D-85764 Neuherberg, Germany;
8.Tech Univ Munich, Sch Life Sci Weihenstephan, D-85354 Freising Weihenstephan, Germany;
9.UFZ Helmholtz Ctr Environm Res, Dept Community Ecol, D-06120 Halle, Germany;
10.German Ctr Integrat Biodivers Res iDiv, D-04103 Leipzig, Germany;
11.Univ Leipzig, Inst Informat, D-04107 Leipzig, Germany;
12.Univ Halle, Inst Comp Sci, D-06120 Halle, Germany;
13.Netherlands Inst Ecol NIOO KNAW, Wageningen, Netherlands;
14.Philipps Univ Marburg, Conservat Biol, D-35037 Marburg, Germany;
15.Univ Jyvaskyla, Ctr Excellence Biol Interact, Dept Biol & Environm Sci, Jyvaskyla 40014, Finland;
16.Inst Plant Breeding Seed Sci & Populat Genet, D-70599 Stuttgart, Germany;
17.Czech Acad Sci, Inst Bot, Pruhonice 25243, Czech Republic;
18.Inst Rech Dev, Lab Genome & Dev Plantes, F-66860 Perpignan, France;
19.Philipps Univ Marburg, Dept Ecol, D-35037 Marburg, Germany;
20.Univ Vienna, Plant Ecol Genom, A-1030 Vienna, Austria;
21.Philipps Univ Marburg, Plant Cell Biol, D-35037 Marburg, Germany;
22.Univ Freiburg, BIOSS Ctr Biol Signaling Studies, D-79098 Freiburg, Germany;
23.Santa Fe Inst, Santa Fe, NM 87501 USA;
24.Max Planck Inst Math Sci, D-04103 Leipzig, Germany
推荐引用方式
GB/T 7714
Richards, Christina L.,Alonso, Conchita,Becker, Claude,et al. Ecological plant epigenetics: Evidence from model and non-model species, and the way forward[J]. ECOLOGY LETTERS,2017,20(12).
APA Richards, Christina L..,Alonso, Conchita.,Becker, Claude.,Bossdorf, Oliver.,Bucher, Etienne.,...&Verhoeven, Koen J. F..(2017).Ecological plant epigenetics: Evidence from model and non-model species, and the way forward.ECOLOGY LETTERS,20(12).
MLA Richards, Christina L.,et al."Ecological plant epigenetics: Evidence from model and non-model species, and the way forward".ECOLOGY LETTERS 20.12(2017).
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