Global S&T Development Trend Analysis Platform of Resources and Environment
DOI | 10.1038/s41467-018-03607-z |
Unifying the global phylogeny and environmental distribution of ammonia-oxidising archaea based on amoA genes | |
Alves, Ricardo J. Eloy1; Minh, Bui Quang2,4; Urich, Tim3; von Haeseler, Arndt2; Schleper, Christa1 | |
2018-04-17 | |
发表期刊 | NATURE COMMUNICATIONS
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ISSN | 2041-1723 |
出版年 | 2018 |
卷号 | 9 |
文章类型 | Article |
语种 | 英语 |
国家 | Austria; Germany; Australia |
英文摘要 | Ammonia-oxidising archaea (AOA) are ubiquitous and abundant in nature and play a major role in nitrogen cycling. AOA have been studied intensively based on the amoA gene (encoding ammonia monooxygenase subunit A), making it the most sequenced functional marker gene. Here, based on extensive phylogenetic and meta-data analyses of 33,378 curated archaeal amoA sequences, we define a highly resolved taxonomy and uncover global environmental patterns that challenge many earlier generalisations. Particularly, we show: (i) the global frequency of AOA is extremely uneven, with few clades dominating AOA diversity in most ecosystems; (ii) characterised AOA do not represent most predominant clades in nature, including soils and oceans; (iii) the functional role of the most prevalent environmental AOA clade remains unclear; and (iv) AOA harbour molecular signatures that possibly reflect phenotypic traits. Our work synthesises information from a decade of research and provides the first integrative framework to study AOA in a global context. |
领域 | 资源环境 |
收录类别 | SCI-E |
WOS记录号 | WOS:000430196500002 |
WOS关键词 | MULTIPLE SEQUENCE ALIGNMENT ; FUNCTION POSTERIOR PROBABILITIES ; MAXIMUM-LIKELIHOOD PHYLOGENIES ; MESOPHILIC CRENARCHAEOTA ; MODEL SELECTION ; NUCLEIC-ACIDS ; OCEAN ; OXIDATION ; BACTERIA ; TREE |
WOS类目 | Multidisciplinary Sciences |
WOS研究方向 | Science & Technology - Other Topics |
URL | 查看原文 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://119.78.100.173/C666/handle/2XK7JSWQ/203743 |
专题 | 资源环境科学 |
作者单位 | 1.Univ Vienna, Archaea Biol & Ecogen Div, Dept Ecogen & Syst Biol, Althanstr 14, A-1090 Vienna, Austria; 2.Univ Vienna, Med Univ Vienna, Ctr Integrat Bioinformat Vienna, Max F Perutz Labs, Campus Vienna Bioctr 5,Dr Bohr Gasse 9, A-1030 Vienna, Austria; 3.Ernst Moritz Arndt Univ Greifswald, Inst Microbiol, Felix Hausdorff Str 8, D-17487 Greifswald, Germany; 4.Australian Natl Univ, Res Sch Biol, Ecol & Evolut, Canberra, ACT 2601, Australia |
推荐引用方式 GB/T 7714 | Alves, Ricardo J. Eloy,Minh, Bui Quang,Urich, Tim,et al. Unifying the global phylogeny and environmental distribution of ammonia-oxidising archaea based on amoA genes[J]. NATURE COMMUNICATIONS,2018,9. |
APA | Alves, Ricardo J. Eloy,Minh, Bui Quang,Urich, Tim,von Haeseler, Arndt,&Schleper, Christa.(2018).Unifying the global phylogeny and environmental distribution of ammonia-oxidising archaea based on amoA genes.NATURE COMMUNICATIONS,9. |
MLA | Alves, Ricardo J. Eloy,et al."Unifying the global phylogeny and environmental distribution of ammonia-oxidising archaea based on amoA genes".NATURE COMMUNICATIONS 9(2018). |
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