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DOI10.1038/s41467-017-02067-1
CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation
Wongpalee, Somsakul Pop1,2; Liu, Shiheng3,4; Gallego-Bartolome, Javier1; Leitner, Alexander5; Aebersold, Ruedi5,6; Liu, Wanlu1,7; Yen, Linda1; Nohales, Maria A.8; Kuo, Peggy Hsuanyu1; Vashisht, Ajay A.9; Wohlschlegel, James A.9; Feng, Suhua1; Kay, Steve A.8; Zhou, Z. Hong3,4; Jacobsen, Steven E.1,10
2019-09-02
发表期刊NATURE COMMUNICATIONS
ISSN2041-1723
出版年2019
卷号10
文章类型Article
语种英语
国家USA; Thailand; Switzerland; Peoples R China
英文摘要

Transcription by RNA polymerase V (Pol V) in plants is required for RNA-directed DNA methylation, leading to transcriptional gene silencing. Global chromatin association of Pol V requires components of the DDR complex DRD1, DMS3 and RDM1, but the assembly process of this complex and the underlying mechanism for Pol V recruitment remain unknown. Here we show that all DDR complex components co-localize with Pol V, and we report the cryoEM structures of two complexes associated with Pol V recruitment-DR (DMS3-RDM1) and DDR' (DMS3-RDM1-DRD1 peptide), at 3.6 angstrom and 3.5 angstrom resolution, respectively. RDM1 dimerization at the center frames the assembly of the entire complex and mediates interactions between DMS3 and DRD1 with a stoichiometry of 1 DRD1:4 DMS3:2 RDM1. DRD1 binding to the DR complex induces a drastic movement of a DMS3 coiled-coil helix bundle. We hypothesize that both complexes are functional intermediates that mediate Pol V recruitment.


领域资源环境
收录类别SCI-E
WOS记录号WOS:000483305400007
WOS关键词HINGE DOMAIN ; POLYMERASE V ; EPIGENETIC PATHWAY ; CRYSTAL-STRUCTURE ; SMC PROTEINS ; RESOLUTION ; SYSTEM ; VISUALIZATION ; MAINTENANCE ; CONTRAST
WOS类目Multidisciplinary Sciences
WOS研究方向Science & Technology - Other Topics
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引用统计
文献类型期刊论文
条目标识符http://119.78.100.173/C666/handle/2XK7JSWQ/203564
专题资源环境科学
作者单位1.Univ Calif Los Angeles, Dept Mol Cellular & Dev Biol, Los Angeles, CA 90095 USA;
2.Chiang Mai Univ, Dept Microbiol, Fac Med, Chiang Mai 50200, Thailand;
3.UCLA, Dept Microbiol Immunol & Mol Genet, Los Angeles, CA 90095 USA;
4.UCLA, Calif NanoSyst Inst, Los Angeles, CA 90095 USA;
5.Swiss Fed Inst Technol, Dept Biol, Inst Mol Syst Biol, CH-8093 Zurich, Switzerland;
6.Univ Zurich, Fac Sci, CH-8057 Zurich, Switzerland;
7.Zhejiang Univ, Univ Edinburgh Inst, Sch Med, Hangzhou 310058, Zhejiang, Peoples R China;
8.Univ Southern Calif, Keck Sch Med, Los Angeles, CA 90089 USA;
9.UCLA, Dept Biol Chem, Los Angeles, CA 90095 USA;
10.UCLA, HHMI, Los Angeles, CA 90095 USA
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GB/T 7714
Wongpalee, Somsakul Pop,Liu, Shiheng,Gallego-Bartolome, Javier,et al. CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation[J]. NATURE COMMUNICATIONS,2019,10.
APA Wongpalee, Somsakul Pop.,Liu, Shiheng.,Gallego-Bartolome, Javier.,Leitner, Alexander.,Aebersold, Ruedi.,...&Jacobsen, Steven E..(2019).CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation.NATURE COMMUNICATIONS,10.
MLA Wongpalee, Somsakul Pop,et al."CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation".NATURE COMMUNICATIONS 10(2019).
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