GSTDTAP  > 地球科学
DOI10.1126/science.aau8287
Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies
Bashor, Caleb J.1; Patel, Nikit2,3; Choubey, Sandeep4; Beyzavi, Ali5; Kondev, Jane4; Collins, James J.6,7,8,9; Khalil, Ahmad S.2,3,9
2019-05-10
发表期刊SCIENCE
ISSN0036-8075
EISSN1095-9203
出版年2019
卷号364期号:6440页码:593-+
文章类型Article
语种英语
国家USA
英文摘要

Eukaryotic genes are regulated by multivalent transcription factor complexes. Through cooperative self-assembly, these complexes perform nonlinear regulatory operations involved in cellular decision-making and signal processing. In this study, we apply this design principle to synthetic networks, testing whether engineered cooperative assemblies can program nonlinear gene circuit behavior in yeast. Using a model-guided approach, we show that specifying the strength and number of assembly subunits enables predictive tuning between linear and nonlinear regulatory responses for single- and multi-input circuits. We demonstrate that assemblies can be adjusted to control circuit dynamics. We harness this capability to engineer circuits that perform dynamic filtering, enabling frequency-dependent decoding in cell populations. Programmable cooperative assembly provides a versatile way to tune the nonlinearity of network connections, markedly expanding the engineerable behaviors available to synthetic circuits.


领域地球科学 ; 气候变化 ; 资源环境
收录类别SCI-E
WOS记录号WOS:000467631800044
WOS关键词TRANSCRIPTIONAL REGULATION ; BINDING ; COMBINATORIAL ; BIOLOGY ; INFORMATION ; SPECIFICITY ; EXPRESSION ; PRINCIPLES ; AFFINITY ; NUMBERS
WOS类目Multidisciplinary Sciences
WOS研究方向Science & Technology - Other Topics
引用统计
文献类型期刊论文
条目标识符http://119.78.100.173/C666/handle/2XK7JSWQ/201399
专题地球科学
资源环境科学
气候变化
作者单位1.Rice Univ, Dept Bioengn, Houston, TX 77030 USA;
2.Boston Univ, Dept Biomed Engn, Boston, MA 02215 USA;
3.Boston Univ, Biol Design Ctr, Boston, MA 02215 USA;
4.Brandeis Univ, Dept Phys, Waltham, MA 02453 USA;
5.Boston Univ, Dept Mech Engn, Boston, MA 02215 USA;
6.MIT, Inst Med Engn & Sci, Dept Biol Engn, 77 Massachusetts Ave, Cambridge, MA 02139 USA;
7.MIT, Synthet Biol Ctr, 77 Massachusetts Ave, Cambridge, MA 02139 USA;
8.Broad Inst MIT & Harvard, Cambridge, MA 02142 USA;
9.Harvard Univ, Wyss Inst Biol Inspired Engn, Boston, MA 02115 USA
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Bashor, Caleb J.,Patel, Nikit,Choubey, Sandeep,et al. Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies[J]. SCIENCE,2019,364(6440):593-+.
APA Bashor, Caleb J..,Patel, Nikit.,Choubey, Sandeep.,Beyzavi, Ali.,Kondev, Jane.,...&Khalil, Ahmad S..(2019).Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies.SCIENCE,364(6440),593-+.
MLA Bashor, Caleb J.,et al."Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies".SCIENCE 364.6440(2019):593-+.
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