GSTDTAP  > 地球科学
DOI10.1126/science.aau6173
Acoel genome reveals the regulatory landscape of whole-body regeneration
Gehrke, Andrew R.1; Neverett, Emily1; Luo, Yi-Jyun1; Brandt, Alexander2; Ricci, Lorenzo1; Hulett, Ryan E.1; Gompers, Annika1; Ruby, J. Graham3; Rokhsar, Daniel S.4; Reddien, Peter W.5,6; Srivastava, Mansi1,7
2019-03-15
发表期刊SCIENCE
ISSN0036-8075
EISSN1095-9203
出版年2019
卷号363期号:6432页码:1191-+
文章类型Article
语种英语
国家USA
英文摘要

Whole-body regeneration is accompanied by complex transcriptomic changes, yet the chromatin regulatory landscapes that mediate this dynamic response remain unexplored. To decipher the regulatory logic that orchestrates regeneration, we sequenced the genome of the acoel worm Hofstenia miamia, a highly regenerative member of the sister lineage of other bilaterians. Epigenomic profiling revealed thousands of regeneration-responsive chromatin regions and identified dynamically bound transcription factor motifs, with the early growth response (EGR) binding site as the most variably accessible during Hofstenia regeneration. Combining egr inhibition with chromatin profiling suggests that Egr functions as a pioneer factor to directly regulate early wound-induced genes. The genetic connections inferred by this approach allowed the construction of a gene regulatory network for whole-body regeneration, enabling genomics-based comparisons of regeneration across species.


领域地球科学 ; 气候变化 ; 资源环境
收录类别SCI-E
WOS记录号WOS:000461329000041
WOS关键词PIONEER TRANSCRIPTION FACTORS ; HEAD ; MODULATION ; ACTIVATION ; CHROMATIN ; NOTUM ; WNT
WOS类目Multidisciplinary Sciences
WOS研究方向Science & Technology - Other Topics
引用统计
文献类型期刊论文
条目标识符http://119.78.100.173/C666/handle/2XK7JSWQ/200970
专题地球科学
资源环境科学
气候变化
作者单位1.Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA;
2.Univ Calif Berkeley, Dept Chem, Berkeley, CA 94703 USA;
3.Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94143 USA;
4.Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94703 USA;
5.MIT, Whitehead Inst Biomed Res, Howard Hughes Med Inst, Cambridge, MA 02138 USA;
6.MIT, Dept Biol, Cambridge, MA 02138 USA;
7.Harvard Univ, Museum Comparat Zool, Cambridge, MA 02138 USA
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GB/T 7714
Gehrke, Andrew R.,Neverett, Emily,Luo, Yi-Jyun,et al. Acoel genome reveals the regulatory landscape of whole-body regeneration[J]. SCIENCE,2019,363(6432):1191-+.
APA Gehrke, Andrew R..,Neverett, Emily.,Luo, Yi-Jyun.,Brandt, Alexander.,Ricci, Lorenzo.,...&Srivastava, Mansi.(2019).Acoel genome reveals the regulatory landscape of whole-body regeneration.SCIENCE,363(6432),1191-+.
MLA Gehrke, Andrew R.,et al."Acoel genome reveals the regulatory landscape of whole-body regeneration".SCIENCE 363.6432(2019):1191-+.
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